FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_HUMAN (T-complex protein 1 subunit theta OS=Homo sapiens GN=CCT8 PE=1 SV=4) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 52/120 (43.33%), Postives = 77/120 (64.17%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 +A N+ A K +A+ RT+ GP GM+KM+ + + +TND ATIL +++V + AK++V S Q+ E+GDGT V+V AG+LLE AE+LL G+ + EGYE+A R A E L + Sbjct: 27 EAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNL 146
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_DICDI (T-complex protein 1 subunit theta OS=Dictyostelium discoideum GN=cct8 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19 Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 207 NVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLE 545 N+ A K ++ I RTSLGP GM+KM+ + + +TND ATI+ ++DV + AK++V ++ Q+ E+GDGT VV + G L++A LLE G+HP I G+E A E +E Sbjct: 25 NIDATKQLSEITRTSLGPNGMNKMIINHLEKLFVTNDAATIIRELDVIHPAAKMLVMAAQMQEQEMGDGTNYVVTLTGEFLQKAATLLEMGLHPSEIITGFEKAGAKLQEIIE 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_BOVIN (T-complex protein 1 subunit theta OS=Bos taurus GN=CCT8 PE=2 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19 Identity = 51/117 (43.59%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 +A N+ A K +A+ RT+ GP GM+KM+ + + +TND ATIL +++V + AK++V S Q+ E+GDGT V+V AG+LLE AE+LL G+ + EGYE+A + A E L Sbjct: 27 EAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEIL 143
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_ENCCU (T-complex protein 1 subunit delta OS=Encephalitozoon cuniculi GN=CCT4 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19 Identity = 48/112 (42.86%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 216 AGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 A +++ + L TSLGP+G+DKM+ D +TNDGATIL+ ++ + I ++ +S +QD E GDGTT VV++AG LLE LLER +HP I + E+A +I + +++R+ Sbjct: 16 ASQSLLQTLSTSLGPRGLDKMVVK-DKKTVVTNDGATILKYLN-HHPIHGILSSMSATQDEECGDGTTSVVILAGCLLESISSLLERNVHPSVICDNLEIAKKIGLRYIDRV 125
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_CHICK (T-complex protein 1 subunit theta OS=Gallus gallus GN=CCT8 PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 6.746e-19 Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 +A N+ A K +A+ RT+ GP GM+KM+ + + +TND ATIL +++V + AK++V S Q+ E+GDGT V+V AG LLE AE LL G+ + EGYE A + A+E L Sbjct: 27 EAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMLVMASHMQEQEVGDGTNFVLVFAGVLLELAEDLLRMGLSVSEVIEGYEKACKKALEIL 143
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_SCHPO (Probable T-complex protein 1 subunit theta OS=Schizosaccharomyces pombe GN=cct8 PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 8.811e-19 Identity = 52/126 (41.27%), Postives = 79/126 (62.70%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI-AQKFE 566 DA N +A + ++ I RTSLGP G +K++ + +TND ATI+ +++V + AKL+V+ ++ Q+ E+GD VVV G LL +AE ++ G+ P+ IA+GYEMA +E LE I A K E Sbjct: 26 DAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIE 151
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_YEAST (T-complex protein 1 subunit zeta OS=Saccharomyces cerevisiae GN=CCT6 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18 Identity = 46/122 (37.70%), Postives = 75/122 (61.48%), Query Frame = 3 Query: 180 LRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLE 545 LR A K NV++ + + +L T+LGPKG KML G++ +T DG +L +M + + A L+ + +QD GDGTT VV + G LL QA + ++ G+HP I +G+E+A + +++ L+ Sbjct: 13 LRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLD 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_MOUSE (T-complex protein 1 subunit theta OS=Mus musculus GN=Cct8 PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18 Identity = 50/120 (41.67%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 +A N+ A K +A+ RT+ GP GM+KM+ + + +TND ATIL +++V + AK++V S Q+ E+GDGT V+V AG+LLE AE+LL G+ + GYE+A + A E L + Sbjct: 27 EAVYRNIQACKELAQTTRTAYGPNGMNKMVINRLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVISGYEIACKKAHEILPEL 146
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_CANAL (T-complex protein 1 subunit theta OS=Candida albicans GN=CCT8 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18 Identity = 44/121 (36.36%), Postives = 80/121 (66.12%), Query Frame = 3 Query: 207 NVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL-ERIAQKFE 566 NV A + +A IL TS+GP G +K++ + G ITND AT+L ++++ + + K++++ S+ Q++E+GD T V+++AG L AEKLL G++ I +G+ +A++ ++ L E + +K E Sbjct: 31 NVEAVREIASILLTSMGPSGRNKIIVNKLGKKFITNDAATMLNELEIVHPVVKILIQASKQQEFEMGDNTNLVIILAGEFLNVAEKLLTLGLNVSEIIQGFNLANKFVMKTLDELVVEKVE 151
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_SCHPO (T-complex protein 1 subunit zeta OS=Schizosaccharomyces pombe GN=cct6 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 44/124 (35.48%), Postives = 71/124 (57.26%), Query Frame = 3 Query: 195 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 A + N+SA + +L+++LGP G KML G + +T DG +L +M + N A + + + +QD GDGTT V ++ G LL+QAE + G+HP I++G+ +A A+ L+ FE Sbjct: 17 ALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFE 140 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |