FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPB_ENCCU (T-complex protein 1 subunit beta OS=Encephalitozoon cuniculi GN=CCT2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18 Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 RG DA++ ++ V IL+T+LGPKGM KML+ V +TNDGA IL + +D+ A++++ S QD+E GDGTT V ++A L+++A KL +HP +I GY MA E L I+ Sbjct: 15 RGDDAKRTILAGTDIVGDILKTTLGPKGMLKMLKGQH--VNVTNDGAFILNNLMIDSPSARILIGSSTGQDWEEGDGTTSVAILASLLVKEAGKL---EMHPTKILRGYRMAQAKCEEILSSIS 133
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPG_PIG (T-complex protein 1 subunit gamma (Fragment) OS=Sus scrofa GN=CCT3 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17 Identity = 42/82 (51.22%), Postives = 58/82 (70.73%), Query Frame = 3 Query: 213 SAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQA 458 +A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L A Sbjct: 1 NAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVA 82
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_CAEEL (T-complex protein 1 subunit theta OS=Caenorhabditis elegans GN=Y55F3AR.3 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.835e-17 Identity = 46/134 (34.33%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 162 QEEKSRLRGLD-AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 +E +G D A + N+ A +A +R++ GP GM+KM+ + + +TND ATIL+++++ + A++++ + Q+ +IGD T VV++A +LLE A L+ G+ P +A GYE A+ A+E L + K Sbjct: 15 KEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVK 148
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_PIG (T-complex protein 1 subunit zeta (Fragment) OS=Sus scrofa GN=CCT6 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16 Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 195 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHP 488 A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L +M + + A L+ +++ +QD GDG T V++ G LL+QA+ + G+HP Sbjct: 4 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGXTSNVLIIGELLKQADLYISEGLHP 101
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_YEAST (T-complex protein 1 subunit theta OS=Saccharomyces cerevisiae GN=CCT8 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16 Identity = 38/115 (33.04%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 207 NVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 +++A + + ++ TS+GP G +K++ + G + ITND AT+L ++D+ + K++V + Q ++GDGT V+++AG LL +EKL+ G+ + I +GY MA + ++ L+ + Sbjct: 31 SIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEM 145
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPH_ENCCU (T-complex protein 1 subunit eta OS=Encephalitozoon cuniculi GN=CCT7 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16 Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = 3 Query: 204 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +NV +A L ++LGP GMDK+ + + +TNDGATIL+ M++ + + +L+V LS SQD E+GDGTT VV++ +L + L++ I E + +EHLE++ + + Sbjct: 23 SNVDVCTKIAEFLESTLGPYGMDKLFAGKE--IVVTNDGATILKHMNIRHPVGRLLVALSESQDSEVGDGTTSVVILTTEILSCLKPLIKDNFDLGCIKGCLEELRMMCIEHLEKMGMELD 141
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_LACZE (60 kDa chaperonin OS=Lactobacillus zeae GN=groL PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+ A + +A ++T+LGPKG + +L G ITNDG TI + +D++ N AKL+ E++ + GDGTT V+A S++ + K + G +P+ I G E A++ AV+ L +I+ K Sbjct: 10 DARAAMLRGVDQLANTVKTTLGPKGRNVVLDKSYGSPEITNDGVTIAKSIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRTGIEKATKAAVDELHKISHK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_LACCB (60 kDa chaperonin OS=Lactobacillus casei (strain BL23) GN=groL PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+ A + +A ++T+LGPKG + +L G ITNDG TI + +D++ N AKL+ E++ + GDGTT V+A S++ + K + G +P+ I G E A++ AV+ L +I+ K Sbjct: 10 DARAAMLRGVDQLANTVKTTLGPKGRNVVLDKSYGSPEITNDGVTIAKSIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRTGIEKATKAAVDELHKISHK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_LACC3 (60 kDa chaperonin OS=Lactobacillus casei (strain ATCC 334) GN=groL PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+ A + +A ++T+LGPKG + +L G ITNDG TI + +D++ N AKL+ E++ + GDGTT V+A S++ + K + G +P+ I G E A++ AV+ L +I+ K Sbjct: 10 DARAAMLRGVDQLANTVKTTLGPKGRNVVLDKSYGSPEITNDGVTIAKSIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRTGIEKATKAAVDELHKISHK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BACLD (60 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groL PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14 Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 147 ILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 I ++ +S LRG+DA +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++ + K + G +P+ + +G E A +AVE L+ I++ E Sbjct: 5 IKFSEEARRSMLRGVDA----------LADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGIEQAVAVAVESLKEISKPIE 138 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |