FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLOP1 (60 kDa chaperonin OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 40/133 (30.08%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 K+ L G +A+++ + +A ++ +LGPKG + +L G ITNDG TI +++++ N A+L+ E++ + GDGTT ++A +++ + K + G +PI I G + A AVE +++I++ Sbjct: 3 KTLLFGEEARRSMQAGVDKLANTVKVTLGPKGRNVILDKKFGSPLITNDGVTIAREIELEDAYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPILIRNGIKTAVEKAVEEIQKISK 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BRECH (60 kDa chaperonin OS=Brevibacillus choshinensis GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 40/129 (31.01%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 DA ++ + + + ++ +LGPKG + +L+ G ITNDG TI +++++ +N A+L+ E++ + GDGTT V+A +++ + K + G +P+ I G E A AVE ++ IA+ E Sbjct: 10 DAPRSMLRGVETLPNAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIPKEIELEDAYENMGAQLVKEVATKTNGIAGDGTTTATVLAAAMIREGLKNVAAGANPMVIRRGMEKAVGAAVEEIKSIAKPVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BORRA (60 kDa chaperonin OS=Borrelia recurrentis (strain A1) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/127 (29.13%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+K+ +S + ++ ++ +LGPKG + ++ G +T DG ++ ++D++N A+L+ E++ + GDGTT V+A ++ + K + GI+PI I +G + A +A E + + A+K Sbjct: 10 DARKSLLSGIEKLSNAVKVTLGPKGRNVLIDKKFGSPIVTKDGVSVAREIDLENSFENMGAQLLKEVAIKTNDLAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVALAAEKIRKSAKK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BORDL (60 kDa chaperonin OS=Borrelia duttonii (strain Ly) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/127 (29.13%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+K+ +S + ++ ++ +LGPKG + ++ G +T DG ++ ++D++N A+L+ E++ + GDGTT V+A ++ + K + GI+PI I +G + A +A E + + A+K Sbjct: 10 DARKSLLSGIEKLSNAVKVTLGPKGRNVLIDKKFGSPIVTKDGVSVAREIDLENSFENMGAQLLKEVAIKTNDLAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVALAAEKIRKSAKK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BIFAS (60 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) GN=groL PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 42/129 (32.56%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A++ ++ +A ++ +LGPKG + +L G TITNDG +I +++D+++ A+L+ E+++ D GDGTT V+A SL+ + K + G +PI + G E AS V+ L A+ E Sbjct: 10 EARQGMLAGLDKLADTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEIDLEDPFERIGAELVKEVAKRTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASDALVKQLVASAKPVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BIFA0 (60 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 42/129 (32.56%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A++ ++ +A ++ +LGPKG + +L G TITNDG +I +++D+++ A+L+ E+++ D GDGTT V+A SL+ + K + G +PI + G E AS V+ L A+ E Sbjct: 10 EARQGMLAGLDKLADTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEIDLEDPFERIGAELVKEVAKRTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASDALVKQLVASAKPVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH602_SORC5 (60 kDa chaperonin 2 OS=Sorangium cellulosum (strain So ce56) GN=groL2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/128 (28.91%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 192 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 ++ ++ + AG A+A ++ +LGPKG + +++ G T+T DG T+ ++++++N+ A+++ E++ GDGTT V+A ++ + KL+ G +P+ I G + A VEHL A++ Sbjct: 10 ESARSMILAGVNALADAVKVTLGPKGRNVVIEKSFGSPTVTKDGVTVAKEIELENRFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIYREGSKLVAAGHNPMEIKRGIDKAVEAIVEHLRGSAKQ 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH601_ROSCS (60 kDa chaperonin 1 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=groL1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/125 (29.60%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 +A++A VA ++T+LGP+G + + G T+T+DG T+ +++++ +N A+L+VE++ + +GDGTT V+A S++ + K++ G +P+ I G + A V L+ +A Sbjct: 10 EARRALKRGVDIVADAVKTTLGPRGRNVSIDKKFGAPTVTHDGVTVAKEIELKDPFENMGARLLVEVATKTNDVVGDGTTTATVLAQSIVNEGLKMVAAGANPMLIKRGLDKAVEAVVAELKSVA 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_XANCP (60 kDa chaperonin OS=Xanthomonas campestris pv. campestris GN=groL PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G DA+ V +A ++ +LGPKG + +L+ G TIT DG ++ +++++ +N A+++ E++ + GDGTT V+A +L+ + K + G++P+ + G + A + AV L+ I++ Sbjct: 9 GEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVIELKNISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_XANC8 (60 kDa chaperonin OS=Xanthomonas campestris pv. campestris (strain 8004) GN=groL PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G DA+ V +A ++ +LGPKG + +L+ G TIT DG ++ +++++ +N A+++ E++ + GDGTT V+A +L+ + K + G++P+ + G + A + AV L+ I++ Sbjct: 9 GEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVIELKNISK 136 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |