FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRSA (60 kDa chaperonin OS=Streptococcus sanguis GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLE 545 DA+ + V +A ++ +LGPKG + +L+ G ITNDG TI +++++ +N AKL+ E++ + GDGTT V+ +++ + K + G +PI I G E A AVE L+ Sbjct: 10 DARSSMVRGVDILANTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGIKNVTAGANPIGIRRGIEAAVATAVEALK 131
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_PEDPA (60 kDa chaperonin OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 39/127 (30.71%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+ + +A +++++GPKG + +L+ G TITNDG TI + ++++ N AKL+ E++ + GDGTT V+ +++ + K + G +P+ I G E A+ AVE L +++ + Sbjct: 10 DARTKMLKGVDKLADTVKSTIGPKGRNVVLEQSYGSPTITNDGVTIAKAIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIEKATSKAVEALHKMSHE 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_OENOB (60 kDa chaperonin OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 3 Query: 228 VARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A ++T++GPKG + +L+ G TITNDG TI + +++D N AKL+ E + + GDGTT V+ +++ + K + G +P+ I G E A+ AV L + + + E Sbjct: 22 LADAVKTTIGPKGRNVVLEQSYGTPTITNDGVTIAKAVELDDHYENMGAKLVTEAASKTNDVAGDGTTTATVLTQAIVNEGLKNVTAGANPVGIRSGIEKATAAAVAGLNKNSHEVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_NITEU (60 kDa chaperonin OS=Nitrosomonas europaea GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 37/128 (28.91%), Postives = 76/128 (59.38%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G A++A +S +A ++ +LGPKG + +L+ G TIT DG ++ +++++ +N A+++ E++ GDGTT V+A S++++ + + G++P+ + G E A AVE L+++++ Sbjct: 9 GDSARQAVISGVNVLADAVKVTLGPKGRNVVLERSYGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDTAGDGTTTATVLAQSIVKEGMRYVAAGMNPMDLKRGIEKAVTGAVEELKKLSK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_MYCGE (60 kDa chaperonin OS=Mycoplasma genitalium GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 38/134 (28.36%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMD----VDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 K + G DA+ + +A ++ ++GPKG + +L+ + ITNDG TI ++++ V+N AK++ + S + GDGTT ++A + + +++ +G +P+ I G E AS + ++ LE+ ++K Sbjct: 3 KELIFGKDARTRLLQGINKIANAVKVTVGPKGQNVILERKFANPLITNDGVTIAKEIELSDPVENIGAKVISVAAVSTNDIAGDGTTTATILAQEMTNRGIEIINKGANPVNIRRGIEDASLLIIKELEKYSKK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLOK5 (60 kDa chaperonin OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 40/133 (30.08%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 KS L DA+K +A ++ +LGPKG + +L G ITNDG TI +++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +P+ I +G ++A AVE ++++++ Sbjct: 3 KSILFSEDARKKMQEGVDKLANTVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIELEEPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRQGIKIAVDKAVEEIKKVSR 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLOK1 (60 kDa chaperonin OS=Clostridium kluyveri (strain NBRC 12016) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 40/133 (30.08%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 KS L DA+K +A ++ +LGPKG + +L G ITNDG TI +++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +P+ I +G ++A AVE ++++++ Sbjct: 3 KSILFSEDARKKMQEGVDKLANTVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIELEEPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRQGIKIAVDKAVEEIKKVSR 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 41/129 (31.78%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMD----VDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 DA++A A+A ++ +LGPKG + +L+ G I NDG +I +++ V+N A+L+ E++ + GDGTT V+A +++ + K + G +P+ + +G E A AVE ++ IA+ E Sbjct: 11 DARRALERGVNALADAVKVTLGPKGRNVVLEKKFGSPQIINDGVSIAREIELADPVENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTAGANPMILRKGIEKAVAKAVEEIKAIAKPVE 139
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH601_ANADE (60 kDa chaperonin 1 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 36/124 (29.03%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 195 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 A++A + + +A + +LGPKG + +++ G TIT DG T+ +++++ +N A+++ E++ + GDGTT V+A S+ E+ KL+ G +P+ + G + A + V HL+ ++ Sbjct: 12 AREAILRGVQTLAEAVAVTLGPKGRNVVIEKSYGAPTITKDGVTVAKEIELESKFENMGAQMVKEVASQTSDKAGDGTTTATVLARSIYEEGLKLVAAGHNPMDLKRGIDRAVEVVVAHLKSLS 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRM5 (60 kDa chaperonin OS=Stenotrophomonas maltophilia (strain R551-3) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G DA+ V +A ++ +LGPKG + +L+ G TIT DG ++ +++++ +N A+++ E++ + + GDGTT V+A +L+ + K + G++P+ + G + A AV L+ I++ Sbjct: 9 GEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDKAVVAAVNELKSISK 136 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |