FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLOBL (60 kDa chaperonin OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 42/133 (31.58%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 KS L G A+++ + +A +R +LGPKG + +L G ITNDG TI ++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +PI+I G A AVE ++ I++ Sbjct: 3 KSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISK 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLOBK (60 kDa chaperonin OS=Clostridium botulinum (strain Okra / Type B1) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 42/133 (31.58%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 KS L G A+++ + +A +R +LGPKG + +L G ITNDG TI ++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +PI+I G A AVE ++ I++ Sbjct: 3 KSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISK 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLOBJ (60 kDa chaperonin OS=Clostridium botulinum (strain Kyoto / Type A2) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 42/133 (31.58%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 KS L G A+++ + +A +R +LGPKG + +L G ITNDG TI ++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +PI+I G A AVE ++ I++ Sbjct: 3 KSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISK 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLOBH (60 kDa chaperonin OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 42/133 (31.58%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 KS L G A+++ + +A +R +LGPKG + +L G ITNDG TI ++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +PI+I G A AVE ++ I++ Sbjct: 3 KSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISK 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLOB6 (60 kDa chaperonin OS=Clostridium botulinum (strain 657 / Type Ba4) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 42/133 (31.58%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 KS L G A+++ + +A +R +LGPKG + +L G ITNDG TI ++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +PI+I G A AVE ++ I++ Sbjct: 3 KSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISK 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLOB1 (60 kDa chaperonin OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 42/133 (31.58%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 KS L G A+++ + +A +R +LGPKG + +L G ITNDG TI ++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +PI+I G A AVE ++ I++ Sbjct: 3 KSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISK 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLAMS (60 kDa chaperonin OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 38/117 (32.48%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 228 VARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A +R +LGP+G + +L+ G TITNDG +I +++++D+ A+L+ E+++ D GDGTT V+A +L+ + + + G PI + G E A E L+ A++ E Sbjct: 22 LADAVRVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIELDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIEKAVAAVTEELKAAAKEIE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_CLAM3 (60 kDa chaperonin OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 38/117 (32.48%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 228 VARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A +R +LGP+G + +L+ G TITNDG +I +++++D+ A+L+ E+++ D GDGTT V+A +L+ + + + G PI + G E A E L+ A++ E Sbjct: 22 LADAVRVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIELDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIEKAVAAVTEELKAAAKEIE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH603_RHOBA (60 kDa chaperonin 3 OS=Rhodopirellula baltica GN=groL3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 39/127 (30.71%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 +A++A +AR ++ +LGPKG + +LQ G T+T DG T+ +++++ +N A ++ E++ GDGTT VMA ++ + K + G++PI++ G E A E L +A K Sbjct: 10 EAREAIRRGVSKLARTVKVTLGPKGRNVILQKSFGSPTVTKDGVTVAKEIELEDPYENMGASMVREVASKTSDVAGDGTTTATVMAEAIFNEGLKAVVAGVNPIQMKSGIETAVSDITEQLHSMAVK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH602_ANADF (60 kDa chaperonin 2 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 36/125 (28.80%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 195 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 A+ A + +A ++ +LGPKG + +++ G TIT DG T+ ++++++N+ A+++ E++ GDGTT V+A +L + KL+ G +P+ I G + A I V L+++++ Sbjct: 12 ARDAILKGVNTLADAVKVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEIELENKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQALYREGSKLVAAGHNPMEIKRGIDKAVEIIVGELKKLSK 136 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |