FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32 Identity = 70/140 (50.00%), Postives = 100/140 (71.43%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ +TNDGATIL+++D+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E L+ IA Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIA 143
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32 Identity = 70/140 (50.00%), Postives = 100/140 (71.43%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ +TNDGATIL+++D+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E L+ IA Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIA 143
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 9.076e-32 Identity = 69/121 (57.02%), Postives = 92/121 (76.03%), Query Frame = 3 Query: 204 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +N+SA KAVA +RTSLGPKGMDKM+Q GDVTITNDGATIL+QM V + A+++VELS++QD E GDGTT VV++AGSLL+ KLL++GIHP I+E ++ A +E L +++ E Sbjct: 39 SNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPEE 159
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.185e-31 Identity = 69/139 (49.64%), Postives = 98/139 (70.50%), Query Frame = 3 Query: 138 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 +P I+L E+ R G DAQ N++AGKAVA +RT+LGPKGMDKML G+V +TNDG TIL++MD+++ A ++VE++ +Q+ E+GDGTT VV++G LL +AE LLE+ IH +A+GY A+ A E L+ A Sbjct: 8 QPLIVL--SEDSQRTSGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVVTNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEKAKELLDDAA 144
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 2.022e-31 Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 3 Query: 204 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 +N+SA KAVA +RTSLGPKGMDKM+Q GDVTITNDGATIL+QM V + A+++VELS++QD E GDGTT VV++AGSLL+ KLL++GIHP I+E ++ A +E L Sbjct: 36 SNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEIL 148
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 2.022e-31 Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 3 Query: 204 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 +N+SA KAVA +RTSLGPKGMDKM+Q GDVTITNDGATIL+QM V + A+++VELS++QD E GDGTT VV++AGSLL+ KLL++GIHP I+E ++ A +E L Sbjct: 36 SNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEIL 148
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31 Identity = 66/127 (51.97%), Postives = 92/127 (72.44%), Query Frame = 3 Query: 165 EEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLE 545 E +R G AQ +N+ AGKAVA +RT+LGP+GMDKML G+V ITNDGATILE+MD+++ A+++VE+S++Q+ E+GDGTT V+ G LL AE LL+ +HP I EGY A+RIA + ++ Sbjct: 14 EGTNRTHGRSAQDSNIRAGKAVAEAVRTTLGPRGMDKMLVDSSGEVVITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEAARIAQDAID 140
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 67/142 (47.18%), Postives = 104/142 (73.24%), Query Frame = 3 Query: 141 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 P +LL++ ++S G DA K N+ A +A +L++SLGP+G+DKML GDVTITNDGATI+++M++ + AKL+VE +++QD E+GDGTT VV+AG LL++A+ LL++ IHP I EGY+ A ++E ++++A K + Sbjct: 5 PVLLLKEGTQRSS--GRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSLEIIDQLATKID 144
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 68/130 (52.31%), Postives = 97/130 (74.62%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 K+R + + +KAN+ A +AVA +RTSLGPKGMDKM+++ GD+ I+NDG TIL+QM + + +AK++VE+S +QD E GDGTT VV+M G+LL AEKLL +GIHP IAE ++ A+ +VE L ++ K Sbjct: 14 KNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGHTILKQMAILHPVAKMLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERSVEILLNMSTK 143
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31 Identity = 65/135 (48.15%), Postives = 100/135 (74.07%), Query Frame = 3 Query: 162 QEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +E SR G DA + N+ A +A +L++SLGP+G+DKML GDVTITNDGATI+++M++ + AKL+VE +++QD E+GDGTT VV+AG LL++AE+LLE+ +HP I +GY+ A A+E +++++ K + Sbjct: 9 KEGTSRSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEIIDQLSLKID 143 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |