FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 63/139 (45.32%), Postives = 100/139 (71.94%), Query Frame = 3 Query: 138 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 +P ++L E R G DAQ+ N+ AG+ + +R++LGPKGMDKML GD+ +TNDG TIL++M V++ AK+++E++++Q+ E+GDGTT VV+AG LL +AE+LL++ +HP + +GY++A + A E L+ IA Sbjct: 5 QPVVVL--PENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLKEIA 141
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.718e-30 Identity = 64/132 (48.48%), Postives = 95/132 (71.97%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 + R + + + +N+ A ++VA +RTSLGPKGMDKM+Q+ G+V +TNDGATIL+ + V + AK++V+LS +QD E GDGTT VV++AGS+L AEKLL++GIHP IAE ++ A+ V+ ++ A E Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE 143 HSP 2 Score: 25.0238 bits (53), Expect = 2.718e-30 Identity = 16/38 (42.11%), Postives = 22/38 (57.89%), Query Frame = 2 Query: 608 TTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 T+LNSK+V++ LA AVL V D R ++DL Sbjct: 156 TSLNSKIVSQYSNLLAPIAVDAVLKVID-PRVATNVDL 192
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.920e-30 Identity = 66/124 (53.23%), Postives = 94/124 (75.81%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 K+R + + +KAN+ A +AVA +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +AK++VE+S +QD E GDGTT VV++ G+LL AEKLL +GIHP IAE ++ A + AVE L Sbjct: 13 KNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTARGEILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVL 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.504e-30 Identity = 61/130 (46.92%), Postives = 95/130 (73.08%), Query Frame = 3 Query: 177 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 R G DA + N+ A +A++ +++T+ GPKGMDKML GDVTITNDGATIL++ ++ + AK++V++++SQD E+GDGT V++AG LL+ AE+LL++ IHP I GY MA A++ L+++A+ + Sbjct: 2 RTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQMAEPID 131
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29 Identity = 67/142 (47.18%), Postives = 99/142 (69.72%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 G P I+L+ E SR G +A + N++A KAV L+++ GP+GMDKML GD+TITNDGATIL++MD+ + AKL+V++++ QD E DGT V++AG L+++AE+LL + IHP I G++ A A++ +E IAQK Sbjct: 13 GIPVIILK--EGSSRTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALKTIEEIAQK 152
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29 Identity = 66/142 (46.48%), Postives = 98/142 (69.01%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 G P I+L+ E SR G +A + N++A KAV L+T+ GP+GMDKML GD+TITNDGATIL++MD+ + AKL+V++++ QD E DGT V+ +G L+++AE+LL + IHP I GY+ A +A++ +E I+ K Sbjct: 13 GIPVIILK--EGSSRTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIKTIEEISTK 152
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29 Identity = 66/122 (54.10%), Postives = 92/122 (75.41%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVE 536 K++ + L+ +K+N+ A +AVA +RTSLGPKGMDKM+Q+ G V I+NDG TIL+ M V + AK++V+LS SQD GDGTT VV++AGSLL A+KLL++GIHP IAE ++ A++ A E Sbjct: 12 KNKEKPLEVRKSNILAARAVADAIRTSLGPKGMDKMIQTARGQVIISNDGNTILQHMAVMHPAAKMLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSIIAENFQKAAQRAAE 133
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.892e-29 Identity = 66/141 (46.81%), Postives = 97/141 (68.79%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G P I+L+ E SR G +A +AN++A KA+ L+++ GP+GMDKML GD+TITNDGATIL++MD+ + KL+V++++ QD E DGT V++AG L ++AE LL + IHP I GY+ A IA++ ++ IAQ Sbjct: 12 GIPVIILK--EGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQEIAQ 150
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.216e-29 Identity = 62/127 (48.82%), Postives = 96/127 (75.59%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 K++ + + ++AN+ A +AVA +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +AK++V++S +QD E GDGTT VV++ G+LL A++LL +GIHP IAE ++ A+R +VE L I Sbjct: 13 KNKEKPQEVRRANIVAARAVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVAKMLVDVSAAQDSEAGDGTTSVVILTGALLGAADRLLNKGIHPTIIAESFQKAARRSVETLLEI 139
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.392e-29 Identity = 65/141 (46.10%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G P I+L+ E SR G +A +AN++A KA+ L+++ GP+GMDKM GD+TITNDGATIL++MD+ + KL+V++++ QD E DGT V++AG L ++AE LL + IHP I GY+ A IA++ ++ IAQ Sbjct: 12 GIPVIILK--EGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQDIAQ 150 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |