FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.165e-25 Identity = 57/138 (41.30%), Postives = 93/138 (67.39%), Query Frame = 3 Query: 141 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 P ILL++ + S+ G+ +N+SA + +A +RT+LGP+GMDK++ G TI+NDGATIL+ +DV + AK +V++++SQD E+GDGTT V ++A L+Q + +E G+HP I + A+++AV ++ IA Sbjct: 5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIA 140
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.165e-25 Identity = 57/138 (41.30%), Postives = 93/138 (67.39%), Query Frame = 3 Query: 141 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 P ILL++ + S+ G+ +N+SA + +A +RT+LGP+GMDK++ G TI+NDGATIL+ +DV + AK +V++++SQD E+GDGTT V ++A L+Q + +E G+HP I + A+++AV ++ IA Sbjct: 5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIA 140
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 115.931 bits (289), Expect = 2.165e-25 Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 138 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y A + L++I+ Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS 141
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.165e-25 Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 138 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y A + L++I+ Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS 141
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25 Identity = 61/138 (44.20%), Postives = 86/138 (62.32%), Query Frame = 3 Query: 141 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 P ++L + ++S G AQ N+ A +AVA I+R++LGP+ M KML P G + ITNDG IL ++DV + AK M+ELSR+ D E+GDGTT V+++AG +L AE + IHP I GY A + A+ E A Sbjct: 8 PIMVLNSKTQRST--GRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWA 143
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25 Identity = 56/122 (45.90%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 177 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 R G + NV A ++A I+++S GP G+DKML GDVTITNDGATIL+ ++V++ AK++ EL+ QD E+GDGTT VV++A LL+ A++L+++ IHP + GY +A + AV ++ Sbjct: 11 RSTGEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYI 132
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 3 Query: 174 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 +R G AQ +N+ A KAVA ++RT LGP+ M KML P G V +TNDG IL +++V + AK M+EL+R+QD E+GDGTT V+++AG +L A LL+R IHP+ + ++ A A+ ++ I Sbjct: 13 NRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEI 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 57/122 (46.72%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 177 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 R G + NV A ++A I+++SLGP G+DKML GDVTITNDGATIL+ ++V++ AK++ EL+ QD E+GDGTT VV++A LL+ A++L ++ IHP + GY +A + AV ++ Sbjct: 11 RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAVRYI 132
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPA_ENCCU (T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi GN=TCP1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGL 575 G+ A + N A V ++TS GP G+DKM G+V+ITNDGATIL+ M +D+ AK++V+L+ QD+E+GDGTT VV++A SL+E+ KL+ G+HP + GY+MA V+ +++ K L Sbjct: 19 GISAVEKNAKAMMKVYNAIKTSFGPLGLDKMCVDSAGEVSITNDGATILQNMLIDDPAAKILVDLATQQDHEVGDGTTSVVLIAVSLIEKGAKLIASGVHPSVVVSGYKMAFNECVQFIKKSMSKSTLNL 148
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 56/138 (40.58%), Postives = 93/138 (67.39%), Query Frame = 3 Query: 141 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 P ILL++ + S+ G+ +N++A + +A +RT+LGP+GMDK++ G TI+NDGATIL+ +DV + AK +V++++SQD E+GDGTT V ++A L+Q + +E G+HP I + A+++AV ++ IA Sbjct: 5 PVILLKEGTDTSQ--GIPQLVSNINACQVIAEAVRTTLGPRGMDKLIVDDRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKDIA 140 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |