FC875403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.750e-51 Identity = 103/198 (52.02%), Postives = 123/198 (62.12%), Query Frame = 2 Query: 92 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 670 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T R REIAAF AQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY C ATD V+SFKSAIWFWMT Q PKPSCH+VIT W Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRW 243
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.328e-50 Identity = 104/207 (50.24%), Postives = 128/207 (61.84%), Query Frame = 2 Query: 92 CGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 670 CG G C + +G G +DG +G I+ R++FE LL +RND CPARGFYTY+AF+ AA AFPAFG +GN R RE+AAF QT HETTGGW AP G ++WGYCF E +PPS YC + +PC KYYGRGPIQL++N+NY ATD +SFK+A+WFWMT Q KPS H+VIT W Sbjct: 63 CGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNY--GPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRW 263
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.186e-50 Identity = 93/181 (51.38%), Postives = 119/181 (65.75%), Query Frame = 2 Query: 137 TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN-LNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 670 T GG++G+++ +F+ +L YRND RC GFYTYDAFI AA++F FG +G++ + +E+AAF AQT HETTGGW AP G YAWGYCF+SE + YC+ ++PC KYYGRGPIQLT NYNY +T+P +SFK+AIWFWMT Q KPS H+VIT W Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRW 253
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 8.846e-50 Identity = 98/181 (54.14%), Postives = 118/181 (65.19%), Query Frame = 2 Query: 143 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWN 673 GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R RE+AAF AQT HETTGGW AP G +AWGYCF E S YC + +PC GK YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PKPS H VIT +W+ Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWS 255
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 194.897 bits (494), Expect = 3.362e-49 Identity = 104/212 (49.06%), Postives = 127/212 (59.91%), Query Frame = 2 Query: 92 CGSGVVCGE----RDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWN 673 CGS CG+ + +G G + GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AF FG +G R RE+AAF AQT HETTGGW AP G +AWGYCF E S YC + +PC GK YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PKPS H VIT +W+ Sbjct: 43 CGSTPYCGDGCQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWS 252
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.734e-49 Identity = 95/184 (51.63%), Postives = 115/184 (62.50%), Query Frame = 2 Query: 134 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWN 673 GT G + I+SR F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ + RE+AAF AQT HETTGGW AP G +AWGYCF E S YC + +PC +YYGRGPIQL+ NYNY ATD + FK+AIWFWMTAQPPKPS H VI +W+ Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWS 200
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.489e-49 Identity = 95/184 (51.63%), Postives = 116/184 (63.04%), Query Frame = 2 Query: 134 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWN 673 GT G + IIS F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R R++AAF AQT HETTGGW AP G +AWGYCF E + YC + +PC +YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PKPS H VIT +W+ Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWS 200
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.846e-48 Identity = 98/209 (46.89%), Postives = 124/209 (59.33%), Query Frame = 2 Query: 92 CGSGVVCGERDTGH----------GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEI--SPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 670 CGSG C + +G G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ R RE+AAF AQT HETTGGW AP G Y+WGYCF E + S YC + +PC KYYGRGPIQ+++NYNY A+D +SFK+A WFWMT Q PKPSCH V+T +W Sbjct: 51 CGSG--CQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQW 255
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.409e-47 Identity = 90/178 (50.56%), Postives = 114/178 (64.04%), Query Frame = 2 Query: 152 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWN 673 + +IS+ +FE +L +RND C A+GFYTY+AFI A K F AFG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYC+ E P YC + +PC KY+GRGPIQ+++NYNY A D V+SFK+A+WFWMTAQ PKPS H+VIT W+ Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNY--GAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWS 180
BLAST of FC875403 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 5.367e-47 Identity = 97/199 (48.74%), Postives = 119/199 (59.80%), Query Frame = 2 Query: 92 CGSGVVCGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSP-YC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 670 C G CG T + GG + IIS +F+ +L +RND C A+GFYTYDAF+ AA A+P F +G+ RE+AAF AQT HETTGGW AP G Y+WGYCF E + +P YC +PC KYYGRGPIQ+T+NYNY A+D +SFK+A WFWMT Q PKPSCH VIT +W Sbjct: 57 CSGG--CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY--GPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQW 251 The following BLAST results are available for this feature:
BLAST of FC875403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875403 ID=FC875403; Name=FC875403; organism=Citrus clementina; type=EST; length=685bpback to top |