FC875406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13 Identity = 58/201 (28.86%), Postives = 89/201 (44.28%), Query Frame = 3 Query: 63 AATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKT-MKSDGIAGLYRG 659 AAT +P A A PA + + FL GG++ +KT AP++RVK+L+Q + + + G+ + K EG + L++GN A +IR FP A+ F +++K L K G+ + AG+ Y LD R RLA K GE + G++ ++ K G G YRG Sbjct: 9 AATEPPPAMPQAAGA---GGPAARRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNHHYR-------HLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHTYTGIIHAFKTIYAKEGGFLGFYRG 189
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12 Identity = 50/169 (29.59%), Postives = 78/169 (46.15%), Query Frame = 3 Query: 159 FLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKT-MKSDGIAGLYRG 659 FL GG++ +KT AP++RVK+L+Q + K + G+ + + EG + L++GN A +IR FP A+ F +++K L K G+ + AG+ Y LD R RLA K GE + G++ ++ K G G YRG Sbjct: 40 FLAGGIAGCCAKTTVAPLDRVKVLLQAHNHHYK-------HLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHSYTGIIHAFKTIYAKEGGFFGFYRG 191
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12 Identity = 54/204 (26.47%), Postives = 88/204 (43.14%), Query Frame = 3 Query: 54 IVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKT-MKSDGIAGLYRG 659 + +AA P+ A P + + FL GG++ +KT AP++RVK+L+Q + K + G+ + + EG + L++GN A +IR FP A+ F +++K K G+ + AG+ Y LD R RLA K GE ++G++ ++ K G G YRG Sbjct: 5 VAAAALAAAEPAPAVPQAAGSGGPTSRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNRHYK-------HLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDVVRVRLAFQVK-----GEHTYSGIIHAFKTIYAKEGGFLGFYRG 191
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: S2542_DANRE (Solute carrier family 25 member 42 OS=Danio rerio GN=slc25a42 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.118e-12 Identity = 49/172 (28.49%), Postives = 77/172 (44.77%), Query Frame = 3 Query: 168 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS--EPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFTFHVL 677 G + AV+KTA AP++R K++ Q + S R S E Y+ I RT +G +LWRGN+A ++R P A+ F + +K + G Y LD R R+A K ++ ++DV+ + + +G+ LYRGFT +L Sbjct: 42 GAFAGAVAKTAVAPLDRTKIIFQ-----VSSNRFSAKEAYRLI----YRTYLKDGFFSLWRGNSATMVRVIPYAAIQFCAHEQYKGILGKYYGFQGKALPPVPRLLAGSLAGTTAAIITYPLDMVRARMAVTPK-------EMYSNIMDVFVRISREEGLKTLYRGFTPTIL 197 HSP 2 Score: 23.8682 bits (50), Expect = 4.118e-12 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 659 FHISCVGIIVYRGLYFGMYESLK 727 F + +G++ Y GL F YE+LK Sbjct: 192 FTPTILGVVPYAGLSFFTYETLK 214
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12 Identity = 43/133 (32.33%), Postives = 63/133 (47.37%), Query Frame = 3 Query: 153 IDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLA 551 + L GGVS ++K+ AP+ERVK+L Q + +M + + K +K+EG+ LW+GNTA ++R FP A+ + DY K NF D+ + F Y LD R RLA Sbjct: 13 VTLLAGGVSGVIAKSTIAPLERVKILYQVKSKMYS-------FNSVYGLMKNIIKNEGLAGLWKGNTATILRIFPYSAIQWTSYDYLKN--NFVTDKKSSVQIFIAG----SLGFSCAILLTYPLDVIRARLA 132
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: CMC2_CAEEL (Putative calcium-binding mitochondrial carrier F55A11.4 OS=Caenorhabditis elegans GN=F55A11.4 PE=5 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.251e-12 Identity = 50/168 (29.76%), Postives = 77/168 (45.83%), Query Frame = 3 Query: 168 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD---GYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGF 662 GG + AVS+T AP +R+K+ +Q K+ RL G+ C K + GI + WRGN NVI+ P A+ F D KRL KK + + + AG+ +Y ++ +TRL A +K G+ G++ K +GI Y+G+ Sbjct: 255 GGAAGAVSRTCTAPFDRIKVYLQVNSS--KTNRL-----GVMSCLKLLHAEGGIKSFWRGNGINVIKIAPESAIKFMCYDQLKRLIQKKKGNEEISTFERLCAGSAAGAISQST-----IYPMEVMKTRL-----ALRKTGQLD-RGIIHFAHKMYTKEGIRCFYKGY 404 HSP 2 Score: 23.483 bits (49), Expect = 5.251e-12 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 674 VGIIVYRGLYFGMYESLK 727 +GII Y G+ +YE+LK Sbjct: 409 IGIIPYAGIDLAIYETLK 426
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 5.285e-12 Identity = 45/170 (26.47%), Postives = 79/170 (46.47%), Query Frame = 3 Query: 168 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFTFHVL 677 GG + AVS+T AP++R+K+L+Q S GI F + +++ G+ +LWRGN NV++ P A+ F + KRL ++ G + +Y ++ +TRLA G Q++G+ D + K +G+ Y+G+ ++L Sbjct: 193 GGGAGAVSRTCTAPLDRLKVLMQVHATRSNS-------MGIAGGFTQMIREGGLRSLWRGNGINVLKIAPESAIKFMAYEQIKRLIGSNQETLGILERLVSGSLAGAIAQSS----IYPMEVLKTRLA-------LGRTGQYSGIADCAKHIFKKEGMTAFYKGYIPNML 344 HSP 2 Score: 22.7126 bits (47), Expect = 5.285e-12 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 674 VGIIVYRGLYFGMYESLK 727 +GII Y G+ +YE+LK Sbjct: 344 LGIIPYAGIDLAVYETLK 361
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 49/169 (28.99%), Postives = 74/169 (43.79%), Query Frame = 3 Query: 162 LMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR---DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRG 659 L GGV+ AVS+T +P+ER+K+L Q ++ +GI K EG + ++GN NVIR P A+ F + +K D+ Y F G Y LD R+RL K +NG+ D + ++ +G+AGLY+G Sbjct: 143 LSGGVAGAVSRTCTSPLERLKILNQVGHMNLEQNAPKYKGRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLLNNNDQTHLTTYENLFVGGAAGVTSLLC-----TYPLDLIRSRLTVQVFGNK------YNGIADTCKMIIREEGVAGLYKG 300
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.156e-11 Identity = 48/170 (28.24%), Postives = 83/170 (48.82%), Query Frame = 3 Query: 168 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFTFHVL 677 GG + AVS+T AP++R+K+L+Q KS L + +K+ G+ +LWRGN NVI+ P AL F + KR+ ++ G + F +Y ++ +TRL A +K G Q+ G+ D + +K++G++ Y+G+ ++L Sbjct: 193 GGGAGAVSRTCTAPLDRLKVLMQVHGCQGKSMCLMSG-------LTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIKRVMGSSQETLGISERFVAGSLAGVIAQST----IYPMEVLKTRL-----ALRKTG--QYKGISDCAKHILKTEGMSAFYKGYVPNML 344 HSP 2 Score: 22.7126 bits (47), Expect = 1.156e-11 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 674 VGIIVYRGLYFGMYESLK 727 +GII Y G+ +YE+LK Sbjct: 344 LGIIPYAGIDLAVYETLK 361
BLAST of FC875406 vs. ExPASy Swiss-Prot
Match: S2542_HUMAN (Solute carrier family 25 member 42 OS=Homo sapiens GN=SLC25A42 PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 1.171e-11 Identity = 50/177 (28.25%), Postives = 83/177 (46.89%), Query Frame = 3 Query: 162 LMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRL----FNFKKDRDGYW-KWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFTFHVL 677 L G ++ A++KTA AP++R K++ Q + S R S K T +EG ++LWRGN+A ++R P A+ F+ + +KR+ + F+ + W + FAG Y LD R R+A K ++ + V+ + + +G+ LY GF VL Sbjct: 38 LSGALAGALAKTAVAPLDRTKIIFQ-----VSSKRFSA--KEAFRVLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGSYYGFRGEALPPWPRLFAG-----ALAGTTAASLTYPLDLVRARMAVTPK-------EMYSNIFHVFIRISREEGLKTLYHGFMPTVL 195 HSP 2 Score: 24.2534 bits (51), Expect = 1.171e-11 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 659 FHISCVGIIVYRGLYFGMYESLK 727 F + +G+I Y GL F YE+LK Sbjct: 190 FMPTVLGVIPYAGLSFFTYETLK 212 The following BLAST results are available for this feature:
BLAST of FC875406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875406 ID=FC875406; Name=FC875406; organism=Citrus clementina; type=EST; length=741bpback to top |