FC875410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.111e-71 Identity = 141/198 (71.21%), Postives = 156/198 (78.79%), Query Frame = 2 Query: 104 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 +AFG DSFS S KAY+AEFI+TLLFVFAGVGSAIA+ ++T ALDP+GLVAIAI H ALFV V++ ANISGGH+NPAVTFGLA+GG ITILTG+FYW+AQLLG+ VA LL VT G A+PTH TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS Sbjct: 4 LAFGSVGDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTH-AVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 200
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.713e-65 Identity = 129/196 (65.82%), Postives = 143/196 (72.96%), Query Frame = 2 Query: 104 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPA 691 IA GR D++ + KA LAEFISTL+FV AG GS +AFNK+T + A PSGLVA A+ H F LFVAV++GANISGGHVNPAVTFG +GG IT+L GI YWIAQLLGS+VA +LK TGGLAVP TFGLVYTVYATA DPK GSLGTIAPIAIGFIVGANILA G FSG SMNPA Sbjct: 6 IAIGRPDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPA 201
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 239.58 bits (610), Expect = 1.231e-62 Identity = 127/200 (63.50%), Postives = 141/200 (70.50%), Query Frame = 2 Query: 95 TMAIAFGRFDDS-FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPA 691 T IA G + + + +A LAEFISTL+FVFAG GS IAFNK+T + A PSGLVA A+ H F LFVAV++GANISGGHVNPAVTFG+ LGG IT+L GI YWIAQLLGS+ A FLL TGG +P TFGLVYTVYATA DPK GSLGTIAPIAIGFIVGANILA G FSG SMNPA Sbjct: 3 TRNIAIGGVQEEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPA 202
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.362e-61 Identity = 125/198 (63.13%), Postives = 141/198 (71.21%), Query Frame = 2 Query: 104 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 IA G + + G+ KA LAEFISTL+FVFAG GS +AF+K+T A P+GL+A A+ H FALFVAV++GANISGGHVNPAVTFG +GG IT+ G+ YWIAQLLGS VA FLL+ TGGLA T TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL G F G SMNPA S Sbjct: 6 IAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFG-LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVS 202
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.471e-60 Identity = 121/198 (61.11%), Postives = 138/198 (69.70%), Query Frame = 2 Query: 104 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 IA G + + G+ KA AEFISTL+FVFAG GS +AF+K+T P+GL+A A+ H FALFVAV++GANISGGHVNPAVTFG +GG IT+ G+ YW+AQLLGS VA FLL+ TGG A T TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL G F G SMNPA S Sbjct: 6 IALGSHQEVYHPGALKAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFG-LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVS 202
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.558e-57 Identity = 113/183 (61.75%), Postives = 133/183 (72.68%), Query Frame = 2 Query: 149 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 KA +AEFISTL+FVFAG GS +AF+K+T A P+GL+A ++ H ALFVAV++GANISGGHVNPAVTFG +GG I++L + YW+AQLLGS+VA LLK+ TGG A+ + TFGLVYTVYATA DPKKG LG IAPIAIGFIVGANILA G F G SMNPA S Sbjct: 21 KAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVS 203
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.470e-57 Identity = 113/183 (61.75%), Postives = 131/183 (71.58%), Query Frame = 2 Query: 149 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 KA +AEFIS L+FVFAG GS +AF+K+T PSGL+A ++ H ALFVAVA+GANISGGHVNPAVTFG +GG I+++ + YW+AQLLGS+VA LLK+ TGG AV + TFGLVYTVYATA DPKKG LG IAPIAIGFIVGANILA G F G SMNPA S Sbjct: 21 KAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVS 203
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.533e-57 Identity = 121/198 (61.11%), Postives = 139/198 (70.20%), Query Frame = 2 Query: 104 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 IA G ++ + KA LAEFIST +FVFAG GS IA+NK+T D A P+GL++ +I H FALFVAV++GANISGGHVNPAVTFG +GG IT+L GI Y IAQLLGSIVAS LL VT +VP TFGLVYTVYATA DPKKG++G IAPIAIGFIVGANIL G F+G SMNPA S Sbjct: 6 IAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVS 202
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.487e-55 Identity = 110/198 (55.56%), Postives = 133/198 (67.17%), Query Frame = 2 Query: 104 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 IA G ++ + +A AEF S ++FVFAG GS +A+ K+T D P+GLVA ++ H FALFVAV++GAN+SGGHVNPAVTFG +GG IT+L I YWIAQLLG++VA LLKV TGG+ + TFGLVYTVYATA DPKKG +G IAP+AIG IVGANIL G F G SMNPA S Sbjct: 6 IAIGTPGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVS 203
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.234e-54 Identity = 119/198 (60.10%), Postives = 137/198 (69.19%), Query Frame = 2 Query: 104 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 IA G ++ + KA LAEFIST +FVFAG GS IA+NK+T D A P+GL++ +I H FALFVAV++GANISGGHVNPAV FG +GG IT+L GI Y IAQLLGSIV S LL VT +VP TFGLVYTVYATA DPKKG++G IAPIAIGFIVGANIL G F+G SMNPA S Sbjct: 6 IAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVS 201 The following BLAST results are available for this feature:
BLAST of FC875410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875410 ID=FC875410; Name=FC875410; organism=Citrus clementina; type=EST; length=699bpback to top |