FC875410

Overview
NameFC875410
Unique NameFC875410
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 65/196 (33.16%), Postives = 98/196 (50.00%), Query Frame = 2
Query:  146 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK--------VVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            ++A +AEFI+T LF++  V + +   +     A    G+  IA   G  +F  V   A ISGGH+NPAVTFGL L  ++++   ++Y + Q LG+I  + ++K         + GG     H                  TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS
Sbjct:   51 WRAGIAEFIATFLFLYITVLTVMGVKRSPNMCA--SVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHG----YTKGSGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 239          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 65/196 (33.16%), Postives = 98/196 (50.00%), Query Frame = 2
Query:  146 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK--------VVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            ++A +AEFI+T LF++  V + +   +     A    G+  IA   G  +F  V   A ISGGH+NPAVTFGL L  ++++   ++Y + Q LG+I  + ++K         + GG     H                  TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS
Sbjct:   51 WRAGIAEFIATFLFLYITVLTVMGVKRSPNMCA--SVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHG----YTKGSGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 239          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 64/184 (34.78%), Postives = 90/184 (48.91%), Query Frame = 2
Query:  161 AEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVV-----TGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            AEF+ TL+ +FAG  +AI   K   D A     L+  A   G A+ + +    +ISG H+NPAVT   A            Y  AQ++ S+ A+F LK V     +GG+ VPT                   +F L++ V A A D +  ++G +A IA+G  V  NIL AGP +  SMNP R+
Sbjct:   84 AEFVGTLILIFAGTATAIVNQK--TDGA---ETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFEPTMSGGVTVPT------VGLSQAFALEFIISFNLMFVVTAVATDTR--AVGELAGIAVGATVMLNILIAGPATSASMNPVRT 254          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 65/186 (34.95%), Postives = 90/186 (48.39%), Query Frame = 2
Query:  158 LAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXX------TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            LAE + T   +FAG G A+  N+ T  A   P G+ A+    G  + V V   ++ISG H NPAVT   A  G+        Y +AQ+LGS +AS  L+VV GG                              +F L++ V   A D +  ++G +A +A+G  V  N+L AGP +G SMNPARS
Sbjct:   67 LAEILGTYFMIFAGCG-AVVVNQSTGGAVTFP-GICAV---WGLVVMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGSTMASLTLRVVFGGGGGGARGEHLFFGTTPAGSMAQAAALEFVISFFLMFVVSGVATDNR--AIGELAGLAVGATVAVNVLFAGPVTGASMNPARS 245          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 60/189 (31.75%), Postives = 90/189 (47.62%), Query Frame = 2
Query:  146 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            ++  +AEF+ T   V  G+GS + +    A        +  IA   G  +        ++SG H+NPAVT GL +   I+IL G FY ++Q +G+I  + L+K  T     GGL V                     TF LV+ V+    D ++  +   AP+AIG  + A  L+A  ++G SMNPARS
Sbjct:   23 WRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPT------MTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGLGVT--GIDPRLTAGQGVMIEALITFILVFVVHG-VCDNRRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARS 202          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 67/203 (33.00%), Postives = 96/203 (47.29%), Query Frame = 2
Query:  113 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT--------GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            GRF  S+     +  + E + + LF+F G  S I  +  T        GL+  A+ HG AL + +A   NISGGH NPAV+  + + G +  +  I YWI+Q+ G ++ + L KVV+         G A                      T  LV  V   A + K  ++G +AP +IGF V  +ILA G  SG  MNPAR+
Sbjct:   24 GRFRVSWYEQYIQPCVVELLGSALFIFIGCLSVIENSPDT--------GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAI--VQEQEQVTEALGVEIILTILLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGGISGACMNPARA 214          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 64/188 (34.04%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  158 LAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT--------GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            + E + + LF+F G  S I  +  T        GL+  A+ HG AL + +A   NISGGH NPAV+  + + G +  +  I YWI+QL G ++ + L KVV+         G A                      T  LV  V   A + K  ++G +AP +IGF V  +ILA G  SG  MNPAR+
Sbjct:   39 IVELVGSALFIFIGCLSVIENSPNT--------GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAI--VQEQEQVAEALGIEIILTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGSISGACMNPARA 214          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16
Identity = 64/188 (34.04%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  158 LAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT--------GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            + E + + LF+F G  S I  +  T        GL+  A+ HG AL + +A   NISGGH NPAV+  + L G +  +  I YW++QL G ++ + L KVV+         G A                      T  LV  V   A + K  ++G +AP +IGF V  +ILA G  SG  MNPAR+
Sbjct:   41 VVELLGSALFIFIGCLSVIENSPNT--------GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAI--VQEQEQVAEALGVEIVMTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGGISGACMNPARA 216          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16
Identity = 64/193 (33.16%), Postives = 97/193 (50.26%), Query Frame = 2
Query:  134 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            S    KA  AEF++TL+FVF G+GSA+ +          PS ++ I++  G A+         +SGGH+NPA+T  L +G QI++L  +FY +AQL+G+I  + +L  +        LAV   N                 TF L   V+++    +   +G+ A ++IG  V    L    F+G SMNPARS
Sbjct:    7 SAAFLKAVFAEFLATLIFVFFGLGSALKWPSAM------PS-VLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLAVNALN--NNTTAGQAVVAEMILTFQLALCVFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARS 189          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16
Identity = 66/193 (34.20%), Postives = 99/193 (51.30%), Query Frame = 2
Query:  134 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            S+   +A  AEF++TLLFVF G+GSA+ + +        PS ++ IA+  G  +   V    +ISG H+NPAVT    +G  +++L   FY  AQLLG++  + LL  +T     G LAV  +                  T  LV  ++A+  + +  + GT A ++IGF V    L    ++G SMNPARS
Sbjct:    6 SIAFSRAVFAEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAV--NALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPA-LSIGFSVALGHLLGIHYTGCSMNPARS 188          
The following BLAST results are available for this feature:
BLAST of FC875410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
PIP11_VICFA5.989e-1733.16Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH5.989e-1733.16Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
NIP61_ARATH7.822e-1734.78Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1... [more]
NIP12_ORYSJ7.822e-1734.95Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica G... [more]
AQP_AEDAE7.822e-1731.75Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP8_NOTAL7.822e-1733.00Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP8_MOUSE7.822e-1734.04Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
AQP8_RAT1.022e-1634.04Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
AQP5_SHEEP1.022e-1633.16Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP2_HUMAN1.022e-1634.20Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31403F04EF CTVClemen1 Citrus clementina cDNA clone C31403F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875410 ID=FC875410; Name=FC875410; organism=Citrus clementina; type=EST; length=699bp
GGTGCTCGATCGAGATAAACCTTATCTTCTTCTTCTTCTTAAGAAAGACT
CGAGAGAGTTTTTTTTCCCCTATTCTCTAGCTCTTTCTTGATCAACAATG
GCTATTGCCTTCGGCCGCTTCGATGATTCTTTCAGCTTAGGCTCCTTCAA
GGCCTATCTTGCTGAGTTTATCTCAACTTTGCTCTTTGTTTTCGCCGGCG
TTGGCTCGGCCATTGCTTTCAACAAGATGACAGCAGATGCAGCACTTGAT
CCATCAGGGCTAGTAGCCATCGCTATTTGCCATGGATTTGCTCTATTTGT
CGCAGTTGCAATTGGTGCTAACATCTCAGGTGGCCACGTCAACCCAGCCG
TCACCTTTGGATTGGCTCTTGGTGGCCAAATCACCATCCTCACTGGCATC
TTCTACTGGATTGCCCAACTTCTTGGCTCTATTGTTGCCAGCTTCCTCCT
CAAAGTTGTCACTGGAGGCTTGGCAGTTCCTACCCACAATGTTGCTGCTG
GAGTTGGAGCCATTGAAGGAGTTGTGATGGAGATCATCATCACATTTGGT
TTGGTCTACACGGTCTATGCCACGGCAGCTGACCCCAAGAAGGGATCATT
GGGCACCATTGCACCCATTGCCATTGGTTTCATTGTCGGTGCCAACATCC
TGGCCGCCGGCCCATTCTCCGGTGGTTCCATGAACCCGGCCCGTTCCTT
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