FC875410

Overview
NameFC875410
Unique NameFC875410
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP2_ERIEU (Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 2
Query:  134 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 463
            S+   +A   EF++TLLFVF G+GSA+ + +        PS ++ IA+  G A+   V +  +ISG H+NPAVT    +G  I+ L   FY  AQLLG++  + LL  VT
Sbjct:    1 SIAFSRAVFTEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLAIGTLVQMLGHISGAHINPAVTVACLVGCHISFLRAAFYVAAQLLGAVAGAALLHEVT 103          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 68/189 (35.98%), Postives = 89/189 (47.09%), Query Frame = 2
Query:  149 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPT------HNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            KA  AEF++T L+VF GVGS + +       AL PS ++ +AI    A   AV I    SG H NPAVT    +G  I++   + Y  AQL G+ V + LL  VT G    T      HN                 T  LV  V+A+     + +LG+ A + IG  V    L    F+G SMNPARS
Sbjct:   22 KALFAEFLATGLYVFFGVGSVLPW-----PVAL-PS-VLQVAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALLYGVTPGGVRETLGVNVVHN---STSTGQAVAVELVLTLQLVLCVFASM--DSRQTLGSPAAM-IGTSVALGHLIGIYFTGCSMNPARS 197          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 60/197 (30.46%), Postives = 88/197 (44.67%), Query Frame = 2
Query:  149 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFV---AVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA-----------VPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            + +++EF+ T   VF G GSA+        AA    G+  + +   F L V   A A+G  ISGGH NPAV+ GL + G+      + Y +AQ+LG++VA+  L V+  G A              H+                  F LV  + +T      G     AP+AIG  +    L + P +  S+NPARS
Sbjct:    3 RKFISEFLGTFWLVFGGCGSAVFA------AAFPELGIGFLGVAFAFGLTVLTMAYAVGG-ISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVG----FAPVAIGLALTLIHLISIPVTNTSVNPARS 188          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 58/198 (29.29%), Postives = 82/198 (41.41%), Query Frame = 2
Query:  149 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS----GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGG-----------LAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            K Y+AEFI T   V  G GSA+    + A    + +    G + +A+  G  +F       +ISGGH NPAV+FGL +G +        Y  AQ+LG+IVAS  + +V  G           LA                          ++ +       K    G  AP AIG  +    L + P +  S+NPARS
Sbjct:    2 KKYIAEFIGTFWLVLGGCGSAVFAAFIAAPGGGNTNEFGLGYLGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG-FAPAAIGLALTLIHLISIPITNTSVNPARS 198          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 55/192 (28.65%), Postives = 83/192 (43.23%), Query Frame = 2
Query:  161 AEFISTLLFVFAGVGSAIAFNKMTADAALDPS---GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVV----------TGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            AE + T + VF G GS +        AA  P    G V +++  G  +   +    +ISGGH NPAVT GL  GG+   +  I Y I+Q++G I+A+ +L V+          T G A                          ++ +    A  ++   G  AP+AIG  +    L + P +  S+NPARS
Sbjct:    7 AELLGTFVLVFGGCGSVVF-------AAAFPELGIGFVGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLYVIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLTAIFLIVIIGATDRRAPPG-FAPLAIGLALVLINLISIPITNTSVNPARS 190          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP2_ELEMA (Aquaporin-2 (Fragment) OS=Elephas maximus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = 2
Query:  134 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 463
            S+   +A  +EF++TLLFVF G+GSA+ + +        PS ++ IA+  G A+   V    +ISG H+NPAVT    +G  ++ L   FY  AQLLG++  + LL  +T
Sbjct:    1 SIAFSRAVFSEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAALLHELT 103          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP2_DUGDU (Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 2
Query:  134 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 463
            S+   +A  +EF++TLLFVF G+GSA+ + +        PS ++ IA+  G A+   V    +ISG H+NPAVT    +G  ++ L   FY  AQLLG++  + +L  +T
Sbjct:    1 SIAFSRAVFSEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAAILHEIT 103          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQPZ2_AGRT5 (Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 64/195 (32.82%), Postives = 86/195 (44.10%), Query Frame = 2
Query:  158 LAEFISTLLFVFAGVGSAIAFNKMTADAALDPS---GLVAIAICHGFA-LFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA-----------VPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697
            LAEF  T   VF G GSA+        AA  P    G   +A+  G   L +A A+G  ISGGH NPAV+ GL + G+    + + Y IAQ+ G+IVA+  L V+  G A              H+                  F L+  + +T      G     APIAIG  +    L + P +  S+NPARS
Sbjct:    6 LAEFFGTFWLVFGGCGSAVF-------AAAFPELGIGFTGVALAFGLTVLTMAYAVGG-ISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAG----FAPIAIGLALTLIHLISIPVTNTSVNPARS 188          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP2_RABIT (Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 2
Query:  134 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGL---VAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 463
            S+   +A  AEF++TLLFVF G+GSA+ +          PS L   + IA+  G  +   V    ++SG H+NPAVT    +G  ++ L   FY  AQLLG++  + LL  +T
Sbjct:    1 SIAFSRAVFAEFLATLLFVFFGLGSALNW----------PSALPSTLQIAMAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALLHEIT 103          
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: AQP2_AMBHO (Aquaporin-2 (Fragment) OS=Amblysomus hottentotus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = 2
Query:  134 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 463
            S+   +A  +EF++TLLFVF G+GSA+ + +        PS ++ IA+  G A+   V    +ISG H+NPAVT    +G  ++ L   FY  AQLLG++  + LL  +T
Sbjct:    1 SIAFSRAVFSEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRATFYVAAQLLGAVAGAALLHELT 103          
The following BLAST results are available for this feature:
BLAST of FC875410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
AQP2_ERIEU3.401e-1240.00Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=A... [more]
AQP6_RAT5.801e-1235.98Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
AQPZ1_AGRT57.576e-1230.46Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
AQPZ_SYNY39.894e-1229.29Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
AQPZ_PHOLL9.894e-1228.65Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
AQP2_ELEMA9.894e-1238.18Aquaporin-2 (Fragment) OS=Elephas maximus GN=AQP2 ... [more]
AQP2_DUGDU9.894e-1237.27Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=... [more]
AQPZ2_AGRT51.292e-1132.82Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain... [more]
AQP2_RABIT1.292e-1137.17Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN... [more]
AQP2_AMBHO1.292e-1138.18Aquaporin-2 (Fragment) OS=Amblysomus hottentotus G... [more]

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Properties
Property NameValue
Genbank descriptionC31403F04EF CTVClemen1 Citrus clementina cDNA clone C31403F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875410 ID=FC875410; Name=FC875410; organism=Citrus clementina; type=EST; length=699bp
GGTGCTCGATCGAGATAAACCTTATCTTCTTCTTCTTCTTAAGAAAGACT
CGAGAGAGTTTTTTTTCCCCTATTCTCTAGCTCTTTCTTGATCAACAATG
GCTATTGCCTTCGGCCGCTTCGATGATTCTTTCAGCTTAGGCTCCTTCAA
GGCCTATCTTGCTGAGTTTATCTCAACTTTGCTCTTTGTTTTCGCCGGCG
TTGGCTCGGCCATTGCTTTCAACAAGATGACAGCAGATGCAGCACTTGAT
CCATCAGGGCTAGTAGCCATCGCTATTTGCCATGGATTTGCTCTATTTGT
CGCAGTTGCAATTGGTGCTAACATCTCAGGTGGCCACGTCAACCCAGCCG
TCACCTTTGGATTGGCTCTTGGTGGCCAAATCACCATCCTCACTGGCATC
TTCTACTGGATTGCCCAACTTCTTGGCTCTATTGTTGCCAGCTTCCTCCT
CAAAGTTGTCACTGGAGGCTTGGCAGTTCCTACCCACAATGTTGCTGCTG
GAGTTGGAGCCATTGAAGGAGTTGTGATGGAGATCATCATCACATTTGGT
TTGGTCTACACGGTCTATGCCACGGCAGCTGACCCCAAGAAGGGATCATT
GGGCACCATTGCACCCATTGCCATTGGTTTCATTGTCGGTGCCAACATCC
TGGCCGCCGGCCCATTCTCCGGTGGTTCCATGAACCCGGCCCGTTCCTT
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