FC875410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38 Identity = 87/198 (43.94%), Postives = 114/198 (57.58%), Query Frame = 2 Query: 107 AFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK-VVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 A G ++ G +A LAE I T LFVFAGVGSA+A K+ GL A+A+ H + V V+ G ++SGGH+NPAVT GLA G+IT+ Y AQLLGS +A LL + VP H TF L++ VYAT DP++ ++G + P+ +G +VGAN+LA GPFSG SMNPARS Sbjct: 5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARS 201
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.154e-38 Identity = 88/199 (44.22%), Postives = 117/199 (58.79%), Query Frame = 2 Query: 104 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGG-LAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 +A G ++ G +A +AE + T LFVF+GVGSA+A K+ GL A+A H + V V+ G ++SGGH+NPAVT GLA GG IT+ Y AQLLGS +A LL +TGG AVP H TF L++ VYAT D ++ ++G + P+ +G +VGANILA GP+SG SMNPARS Sbjct: 4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTI-MGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVD-RRRAVGALGPLLVGLVVGANILAGGPYSGASMNPARS 200
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 87/199 (43.72%), Postives = 112/199 (56.28%), Query Frame = 2 Query: 131 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSG-LVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVY--------ATAADPKKGSLGT-IAPIAIGFIVGANILAAGPFSGGSMNPARS 697 FS S ++YLAEFIST LFVF VGSAI+ +T +G LVA A+ F LF AV I A++SGGHVNPAVTF A+GG+I + + +FYW +QLLG+ A L + + G VPT TF LVYTV+ + D K+ T + +A+G GA +LAAG +G SMNPARS Sbjct: 14 FSAPSLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARS 212
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 84/207 (40.58%), Postives = 108/207 (52.17%), Query Frame = 2 Query: 98 MAIAFGRFDDSFS------LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADA-ALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 MA + DSF +G +A LAE + T LFVF GV +A+A A+ + L A+AI H A V V G ++SGGH+NPAVT GL + G IT L + Y AQLL S A LL+ ++GG+ P H TF L++ YA DP + + I P+ G IVGAN LA G F+G SMNPARS Sbjct: 1 MAKLMNKLVDSFEHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARS 206
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31 Identity = 78/188 (41.49%), Postives = 104/188 (55.32%), Query Frame = 2 Query: 137 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADA-ALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 +G +A LAE + T LFVF GV +++A A+ + L A+AI H A V V G ++SGGH+NPAVT G+ + G IT L + Y AQLL S +A LL+ ++GG+ P H TF L++ YA DP + + TI P+ G IVGAN LA G F+G SMNPARS Sbjct: 22 VGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARS 208
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.271e-31 Identity = 79/187 (42.25%), Postives = 100/187 (53.48%), Query Frame = 2 Query: 140 GSFKAYLAEFISTLLFVFAGVGSAIAFN-KMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 G +A LAE + T +FVF GV + +A A AA+ + L +AI A V V G ++SGGH+NPAVT L G IT Y AQLL S +A LL+ +TGG+A P H TF L++ VYAT DP + S+ P+ G IVGAN +A G FSG SMNPARS Sbjct: 17 GCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDP-RSSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARS 202
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.517e-31 Identity = 76/184 (41.30%), Postives = 99/184 (53.80%), Query Frame = 2 Query: 146 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 F+ L E + T LFVF GVG+A+ + T + L A+A+ + V G +ISGGHVNPAVT LA+GG +T+ Y AQ+L S A FLL+ +TGGLA P H TF L++ +YAT DP+K L P+ G +VGAN +A SG SMNPARS Sbjct: 18 FRGVLGELVLTFLFVFIGVGAAMT-DGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLVGANSVAGAALSGASMNPARS 199
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.374e-29 Identity = 73/198 (36.87%), Postives = 101/198 (51.01%), Query Frame = 2 Query: 104 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 + G +++ G +A E + T LFVF GV S I K A A + + + A A+ + V G ++SGGH+NPAVT LA+GG IT+ Y AQL GS +A LL+ +TGG A P H TF L+ + AT DP++ + P+ G +VGAN +A G +G SMNPARS Sbjct: 9 LELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGK-AAGGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARS 205
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23 Identity = 79/211 (37.44%), Postives = 111/211 (52.61%), Query Frame = 2 Query: 125 DSFSLGS---FKAYLAEFISTLLFVFAGVGSAIAFNKMT------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-------GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 D+ LGS ++A +AEFI+TLLF++ V + I + T ADAA G++ IA G +F+ V A ISGGH+NPAVTFGL L +++++ I Y +AQ LG+I L+K GG A + TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS Sbjct: 31 DAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGA---NTLAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 237
BLAST of FC875410 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23 Identity = 74/207 (35.75%), Postives = 108/207 (52.17%), Query Frame = 2 Query: 125 DSFSLGS---FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS-----GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 697 D+ LG ++A +AEFI+TLLF++ + + I + T D AL+P G++ IA G +F+ V A ISGGH+NPAVTFGL L ++T++ + Y +AQ LG+I L+K + TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS Sbjct: 27 DATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQT-DPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARS 231 The following BLAST results are available for this feature:
BLAST of FC875410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875410 ID=FC875410; Name=FC875410; organism=Citrus clementina; type=EST; length=699bpback to top |