FC875416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.754e-54 Identity = 102/204 (50.00%), Postives = 127/204 (62.25%), Query Frame = 1 Query: 106 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPNSLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 SA CG+ G +CPGG CCS+FGWCG T++YC +GCQS C+ G++G GG L +IS F ++L++RND C + FYTYDAF+ AAKAFP F N G+ +KREIAAF QT HETTGGWP AP G YAWGYCF RE ++ +PC +YYGRGP +SWNYNY +C NNPD + Sbjct: 19 SAEQCGTQAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCS-----------GSSG-GGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQC--GRAIGVDLLNNPDLV 208
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.532e-53 Identity = 109/207 (52.66%), Postives = 128/207 (61.84%), Query Frame = 1 Query: 106 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPNSLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 SA CGS G C G CCS+FGWCG T DYC G CQS C P T GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC KY+GRGP +S NYNY C NNPD + Sbjct: 22 SAEQCGSQAGGARCASGLCCSKFGWCGNTNDYCGPGNCQSQC---------PGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLV 216
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 2.532e-53 Identity = 101/187 (54.01%), Postives = 119/187 (63.64%), Query Frame = 1 Query: 109 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYCDPN--YPCRG--KYYGRGPNSLSWNYNY 642 A CGS G VCP CCS+FGWCG T+DYC GCQS C+ CG P + G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + KRE+AAF AQT HETTGGW AP G YAWGYCF E GAA DYC + +PC KYYGRGP LS+N+NY Sbjct: 21 AEQCGSQAGGAVCPNCLCCSQFGWCGSTSDYCGAGCQSQCSAAGCGGGGPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY 207
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53 Identity = 108/207 (52.17%), Postives = 127/207 (61.35%), Query Frame = 1 Query: 109 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTA-GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPNSLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 A NCGS G C G+CCS+FGWCG T DYC G CQS C P G G GG+LG IS MF+ +L++RN+ C + FY+Y+AFI AA++FP FG SG+ RKREIAAFFAQT HETTGGW AP G YAWGYCF RE G DYC P+ +PC KY+GRGP +S NYNY C NNPD + Sbjct: 26 AQNCGSQGGGKACASGQCCSKFGWCGNTNDYCGSGNCQSQC---------PGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERG-NPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLV 220
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.641e-52 Identity = 97/183 (53.01%), Postives = 119/183 (65.03%), Query Frame = 1 Query: 118 CGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYC--DPNYPCRG--KYYGRGPNSLSWNYNY 642 CGS G +CP CCS++GWCG T+ YC GCQS C+ CG P + G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ RKRE+AAF AQT HETTGGW AP G Y+WGYCF E G SDYC +PC KYYGRGP +S+NYNY Sbjct: 23 CGSQAGGALCPNCLCCSQYGWCGSTSAYCGSGCQSQCSGS-CGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY 204
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.657e-52 Identity = 101/190 (53.16%), Postives = 124/190 (65.26%), Query Frame = 1 Query: 109 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELG-----KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPNSLSWNYNY 642 A CGS G +CP CCS +GWCG T+DYC +GCQS C+ CG G G GG G ++S+++FE LL +RND CPAR FYTYDA + AA AFP F +G++ RKRE+AAF QT HETTGGW AP G Y+WGYCF E+GA +S YC P+ +PC KY+GRGP LS+NYNY Sbjct: 23 AEQCGSQAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDG--CGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNYNY 209
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.657e-52 Identity = 102/186 (54.84%), Postives = 124/186 (66.67%), Query Frame = 1 Query: 109 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECD-PDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPNSLSWNYNY 642 A CG+ G CP CCSR+GWCG T+D+C +GCQS C+ CG P + DG +G I+ R +FE LL +RND CPAR FYTY+AF+ AA AFPAFG +GN RKRE+AAF QT HETTGGWP AP G ++WGYCF +E SDYC P+ +PC KYYGRGP LS+N+NY Sbjct: 32 AEQCGAQAGGARCPNCLCCSRWGWCGTTSDFCGDGCQSQCSG--CGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQN-PPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNY 212
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.657e-52 Identity = 110/214 (51.40%), Postives = 129/214 (60.28%), Query Frame = 1 Query: 106 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPNSLSWNYNYLRCXXXXXXXXXXXNNPDFLLLISTI 720 SA CGS G +C G CCS+FGWCG T DYC G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGP +S NYNY C NNPD + S I Sbjct: 17 SAEQCGSQAGGALCASGLCCSKFGWCGDTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDSVI 216
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.064e-51 Identity = 105/189 (55.56%), Postives = 125/189 (66.14%), Query Frame = 1 Query: 109 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCG----ECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPNSLSWNYNY 642 A CGS G CP CCSRFGWCG T+DYC +GCQS C CG P +G GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKRE+AAF AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC GK YYGRGP LS NYNY Sbjct: 19 AEQCGSQAGGATCPNCLCCSRFGWCGSTSDYCGDGCQSQC--AGCGGGGTPVTPTPTPSGGGG-VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY 203
BLAST of FC875416 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.815e-51 Identity = 109/214 (50.93%), Postives = 128/214 (59.81%), Query Frame = 1 Query: 106 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPNSLSWNYNYLRCXXXXXXXXXXXNNPDFLLLISTI 720 SA CGS G +C G CCS+FGWCG T DYC G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGP +S NYNY C NNPD + S I Sbjct: 17 SAEQCGSQAGGALCAPGLCCSKFGWCGNTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDSVI 216 The following BLAST results are available for this feature:
BLAST of FC875416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875416 ID=FC875416; Name=FC875416; organism=Citrus clementina; type=EST; length=734bpback to top |