FC875420

Overview
NameFC875420
Unique NameFC875420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAF7 (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate 3D7) GN=CPK1 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 46/144 (31.94%), Postives = 79/144 (54.86%), Query Frame = 3
Query:  120 EEMQKIFNQFDENKDGKISLTELA---TVLKSMGSSYKE-----EELVRVMEDLDTDRDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGI-KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 524
            +E+  IF + D+N DG++   EL     +L+S  +   E     EE+  +++++D D++G+I  SEF ++C        E  LR+AF+L+D DK+G I+ EEL    N  G+   S      ++   D + D  ++F+EF +MM
Sbjct:  375 KELTDIFKKLDKNGDGQLDKKELIEGYNILRSFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRDAFNLFDTDKSGKITKEEL---ANLFGLTSISEQMWNEVLGEADKNKDNMIDFDEFVNMM 515          
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: CDC31_SCHPO (Cell division control protein 31 OS=Schizosaccharomyces pombe GN=cdc31 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 46/172 (26.74%), Postives = 81/172 (47.09%), Query Frame = 3
Query:   27 IFSPKQNKRKRKAMAATTEADSNRKQLIVSPEEMQK-----IFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDRDGFISLSEFETICRTSSGAAGEAE-LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 524
            +F+  + KR+ +A + T         L V   E Q+      F  FD +KD  I   EL   ++++G + ++ E+++++ D D    G++ + +F  +           E ++ AF+L+D D+ G IS   L  V   L          AMI+  D D DG +N +EF ++M
Sbjct:    1 MFANARAKRRSRASSPTPARLGGYAPLRVEITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIM 172          
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: CABP2_MOUSE (Calcium-binding protein 2 OS=Mus musculus GN=Cabp2 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 3
Query:   57 RKAMAATTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLD---TDRDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 527
            R ++AAT      R + I   EE+Q  F +FD ++DG I   EL   ++++G    E EL+ + + +     D + F+ L   + +  T+    G  ELR+AF  +D + +G IS  EL   L   LG + S      +++ +D +GDG V+FEEF  MM+
Sbjct:   59 RPSIAATQLDRELRPEEI---EELQIAFQEFDRDRDGYIGYRELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETAD-MIGVRELRDAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQDIDLNGDGLVDFEEFVRMMS 215          
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: CABP2_HUMAN (Calcium-binding protein 2 OS=Homo sapiens GN=CABP2 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 3
Query:   57 RKAMAATTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLD---TDRDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 527
            R ++AAT      R + I   EE+Q  F +FD ++DG I   EL   ++++G    E EL+ + + +     D + F+ L   + +  T+    G  ELR+AF  +D + +G IS  EL   L   LG + S      +++ VD +GDG V+FEEF  MM+
Sbjct:   63 RPSIAATQLDRELRPEEI---EELQVAFQEFDRDQDGYIGCRELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETAD-MIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMMS 219          
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12
Identity = 41/128 (32.03%), Postives = 72/128 (56.25%), Query Frame = 3
Query:  132 KIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDRDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 515
            ++F++ D NKDGK+ + EL   LK+MG +  +    +++E  DT++DG +   EF            E +++ AF   D++K+G I + E+   L  LGI  S+D    ++K +D+DG   V++ E+R
Sbjct:   26 ELFHKLDVNKDGKVDILELQEGLKAMGMAVGKGAEEKIVEAGDTNKDGHLDFGEFMRYLEEH-----EKKMKIAFTSLDKNKDGKIESSEVMNSLKTLGINISLDHAEKILKSMDSDGTLTVDWNEWR 148          
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: MLR_PHYPO (Myosin regulatory light chain OS=Physarum polycephalum PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12
Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 3
Query:  114 SPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDRDGFISLSEFETICRTSSGAAGEA--ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 530
            S +++Q+ F  FD++ DGK+S+ EL + L+S+G +    EL  +   L+        L+ F+T+ R       E   E+ +AF   D++ NG I   EL  +L  LG   +      ++K V   GDG +N+E F  M+ T
Sbjct:    3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140          
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: CDPKF_ARATH (Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12
Identity = 48/166 (28.92%), Postives = 82/166 (49.40%), Query Frame = 3
Query:   45 NKRKRKAMAATTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDRDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGI--KCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSL 536
            NK K+ A+    E+ S  +      + ++ +F   D +K G I+  EL   L  +GS   E E+ ++ME  D D +G I   EF +          +  + +AF  +D+D +G I+ +EL   +   G+  + S+   +A    VD D DG +N+EEF +MM + +
Sbjct:  385 NKLKKLALKVIAESLSEEEI-----KGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLMEAADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNSGFITMDELESAMKEYGMGDEASIKEVIA---EVDTDNDGRINYEEFCAMMRSGI 542          
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12
Identity = 51/163 (31.29%), Postives = 82/163 (50.31%), Query Frame = 3
Query:   45 NKRKRKAMAATTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDRDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVL-NRLGIKCSVDGCVA--MIKPVDADGDGNVNFEEFRSMM 524
            N+ K+K +    E  S     I   E ++ +F+  D++KDGKI+  EL   L+ +GS   E E+  +ME  D D +GF+   EF  +         +   + AF  +D+D +  I  +EL   L + LG     D  V   +++ VD D DG +N++EF +MM
Sbjct:  347 NRFKKKVLRVIAEHLS-----IQEVEVIKNMFSLMDDDKDGKITYPELKAGLQKVGSQLGEPEIKMLMEVADVDGNGFLDYGEFVAVIIHLQKIENDELFKLAFMFFDKDGSTYIELDELREALADELG---EPDASVLSDIMREVDTDKDGRINYDEFVTMM 501          
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAF7 (Calcium-dependent protein kinase 4 OS=Plasmodium falciparum (isolate 3D7) GN=CPK4 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12
Identity = 46/146 (31.51%), Postives = 76/146 (52.05%), Query Frame = 3
Query:  120 EEMQKIFNQFDENKDGKISLTELAT----VLKSMGSSYK-------EEELVRVMEDLDTDRDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 524
            +E+ KIF + D+N DG++   EL      +LK  G           E E+ +++  +D D++G+I  SEF T+            L +AF L+D+D +G ISA EL  +     +  S +    ++K VD + DG ++F+EFR M+
Sbjct:  379 KELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGEDTSDLDNAAIEYEVDQILNSIDLDQNGYIEYSEFLTVSIDRKLLLSTERLEKAFKLFDKDGSGKISANELAQLFGLSDV--SSECWKTVLKEVDQNNDGEIDFKEFRDML 522          
BLAST of FC875420 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12
Identity = 49/159 (30.82%), Postives = 80/159 (50.31%), Query Frame = 3
Query:   54 KRKAMAATTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDRDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELN--LVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 524
            K K MA    A +  ++ I   + ++++F   D +  G I+  EL   L  +GS   E E+ ++ME  D D +G I   EF T          +  L +AF  +D+D +G I+ +EL   L+ + +G   ++     +I  VD D DG +N+EEF +MM
Sbjct:  350 KLKKMALKVIASNLNEEEI---KGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIR---EIISEVDTDNDGRINYEEFCAMM 502          
The following BLAST results are available for this feature:
BLAST of FC875420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 321
Match NameE-valueIdentityDescription
CDPK1_PLAF71.673e-1231.94Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
CDC31_SCHPO1.673e-1226.74Cell division control protein 31 OS=Schizosaccharo... [more]
CABP2_MOUSE1.673e-1232.30Calcium-binding protein 2 OS=Mus musculus GN=Cabp2... [more]
CABP2_HUMAN1.673e-1232.92Calcium-binding protein 2 OS=Homo sapiens GN=CABP2... [more]
SCM1A_XENLA2.185e-1232.03Calcium-binding mitochondrial carrier protein SCaM... [more]
MLR_PHYPO2.185e-1231.21Myosin regulatory light chain OS=Physarum polyceph... [more]
CDPKF_ARATH2.185e-1228.92Calcium-dependent protein kinase 15 OS=Arabidopsis... [more]
CDPKA_ARATH2.185e-1231.29Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPK4_PLAF72.185e-1231.51Calcium-dependent protein kinase 4 OS=Plasmodium f... [more]
CDPK2_MAIZE2.185e-1230.82Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31403G02EF CTVClemen1 Citrus clementina cDNA clone C31403G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875420 ID=FC875420; Name=FC875420; organism=Citrus clementina; type=EST; length=739bp
GTCTTCTATACCGTGTCTCTTAAATTATCTTTTCCCCCAAACAGAACAAA
AGAAAAAGAAAAGCAATGGCAGCAACGACGGAGGCAGATTCGAATAGGAA
ACAGCTAATAGTGAGCCCGGAGGAGATGCAGAAGATCTTCAACCAGTTCG
ACGAGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTG
AAATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGA
GGATCTCGATACCGACAGGGACGGATTCATCAGCCTGTCGGAGTTCGAAA
CGATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAG
GCGTTTGATCTCTACGATCAGGACAAGAACGGTTTGATTTCGGCGGAGGA
GTTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGAT
GTGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAAT
TTTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGC
GCCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATAT
CAACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGT
CTACTACTTTTAATGGTAATAAACTCTGATGCATTTTCAATGGTTTAAAA
ATTGGCTTACGATATTGAAAAAAAAAAAAAAAAAAAAAA
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