FC875422

Overview
NameFC875422
Unique NameFC875422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length642
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15338 contig Ccv1_Contig15338:125..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: ARK72_HUMAN (Aflatoxin B1 aldehyde reductase member 2 OS=Homo sapiens GN=AKR7A2 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 9.010e-14
Identity = 62/204 (30.39%), Postives = 95/204 (46.57%), Query Frame = 2
Query:   14 GCMSLSGGYNSPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPREN--IQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGK 601
            G M +    ++P S     + ++    +G T  DTA  Y    +E +LG     L   +  +++ATK        D   +K  P+ VRS  E SLKRL    +DL+Y H  D   P+EET+   ++L +EGK   +GLS       A   T+ +++     T  Q  ++  TR +E E+ P  R  G+    Y+PL  G   GK
Sbjct:   43 GTMEMGRRMDAPASA----AAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKAN----PWDGKSLK--PDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGK 236          
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: YEAE_ECOLI (Uncharacterized protein yeaE OS=Escherichia coli (strain K12) GN=yeaE PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.621e-13
Identity = 50/175 (28.57%), Postives = 90/175 (51.43%), Query Frame = 2
Query:   68 ISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE---ASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGR 583
            ++ ++     G+T  DTA+ Y     E ++G+AL  L  +   V+  + +   G  A+          + CEASL+RL+ +Y+DLY  H    S   EET+  M+KL+ +GKI+  G+S    A    + +    +     Q+ + L +R IE +++P C++  + ++ YSPL +
Sbjct:   35 VAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSKVYPWNAGGQKAI----------NACEASLRRLNTDYLDLYLLH-WSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQ 198          
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: Y2320_MYCBO (Uncharacterized oxidoreductase Mb2320 OS=Mycobacterium bovis GN=Mb2320 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.471e-13
Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 2
Query:   35 GYNSPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGK 601
            GY    +      I+K A   G+T FDTA+ YG   +E +LG+AL    R  + VA+K            V   P  +++   AS +RL +  I LY  H+ +  VP    +  M+ L++ G I   G+S  S    R+A A    P+ + Q+ +SL   D   ++VP        ++ YSPL +G  GGK
Sbjct:   28 GYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGD-DRTEVVVASK---------VFPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGK 208          
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: Y2298_MYCTU (Uncharacterized oxidoreductase Rv2298/MT2355 OS=Mycobacterium tuberculosis GN=Rv2298 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.471e-13
Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 2
Query:   35 GYNSPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGK 601
            GY    +      I+K A   G+T FDTA+ YG   +E +LG+AL    R  + VA+K            V   P  +++   AS +RL +  I LY  H+ +  VP    +  M+ L++ G I   G+S  S    R+A A    P+ + Q+ +SL   D   ++VP        ++ YSPL +G  GGK
Sbjct:   28 GYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGD-DRTEVVVASK---------VFPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGK 208          
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: ARK73_HUMAN (Aflatoxin B1 aldehyde reductase member 3 OS=Homo sapiens GN=AKR7A3 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.471e-13
Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 2
Query:   14 GCMSLSGGYNSPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFGFAELGLDAVIVKGN---PEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGK 601
            G M +    ++P S     ++ +    +G T  DTA  Y    +E +LG     L   + +V       ++   A+ + GN   P+ +R   E SLKRL    +DL+Y H  D S P+EET+    +L +EGK   +GLS       A   T+ +++     T  Q  ++  TR +E E+ P  R  G+    ++PL  G   GK
Sbjct:   15 GAMEMGRRMDAPTSA----AVTRAFLERGHTEIDTAFVYSEGQSETILGGLGLRLGGSDCRV-------KIDTKAIPLFGNSLKPDSLRFQLETSLKRLQCPRVDLFYLHMPDHSTPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGK 208          
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: AAD10_YEAST (Putative aryl-alcohol dehydrogenase AAD10 OS=Saccharomyces cerevisiae GN=AAD10 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.840e-13
Identity = 44/152 (28.95%), Postives = 73/152 (48.03%), Query Frame = 2
Query:  182 RENIQVATKFGFAELGLD------AVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGK 601
            R+ I +ATKF     G D      A     +   +      SL++L  ++ID+ Y H  D    IEE +  +  LV++GK+ Y+G+S+     +  A      H   P +  Q +W++  RD E +I+P+ R  G+ + P+  +G G F  K
Sbjct:    7 RDQIVIATKFTTDYKGYDVGKGKSANFCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSK 158          
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: YP088_YEAST (Putative aryl-alcohol dehydrogenase YPL088W OS=Saccharomyces cerevisiae GN=YPL088W PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.627e-13
Identity = 62/218 (28.44%), Postives = 101/218 (46.33%), Query Frame = 2
Query:   14 GCMSLSGGYNSPVSEEDG---ISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKM--LPRENIQVATKFGFAE---------------LGLDAVIVKG-NPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRG 586
            GCMS      +    ED      I+KH ++KG+  FDTAD Y    +E ++ + L+   + RE + + TK  F                   LD    +G + +++ +  E S+KRL   YIDL   HR+D   P++E +  +  +VE G ++YIG S       A        +      + Q  ++L  R+ E E++P  +   IG++P+SP  RG
Sbjct:   22 GCMSYGSKKWADWVIEDKTQIFKIMKHCYDKGLRTFDTADFYSNGLSERIIKEFLEYYSIKRETVVIMTKIYFPVDETLDLHHNFTLNEFEELDLSNQRGLSRKHIIAGVENSVKRLGT-YIDLLQIHRLDHETPMKEIMKALNDVVEAGHVRYIGASSMLATEFAELQFTADKYGWFQFISSQSYYNLLYREDERELIPFAKRHNIGLLPWSPNARG 238          
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: YDBC_ECOLI (Putative oxidoreductase ydbC OS=Escherichia coli (strain K12) GN=ydbC PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.961e-13
Identity = 55/202 (27.23%), Postives = 102/202 (50.50%), Query Frame = 2
Query:    2 KLGFGCMSLSGG--YNSPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFGFAELGLDAVIVKG-NPEYVRSCCEASLKRLDVEYIDLYYQHRV--DTSVP----IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLG 580
            +LG+G M L+G   +  P      I++++ A   G+   DT+D YGP+    ++ +AL     +++ + TK G A  G DA  +   +P  ++     +L+ L ++ +D+     +  D   P    IE ++  + ++ ++G +K+IGLS  +P  +  A  +  I  VQ E+++  R  +  I  L  + GI  VP+ PLG
Sbjct:   15 RLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPY-SDDLTIVTKIG-ARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALAHD-GIAYVPFFPLG 213          
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: ARK72_MOUSE (Aflatoxin B1 aldehyde reductase member 2 OS=Mus musculus GN=Akr7a2 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 2
Query:  257 PEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGK 601
            P+ VRS  E SLKRL    +DL+Y H  D S P+EET+    +L +EGK   +GLS       A   T+ +++     T  Q  ++  TR +E E++P  R  G+    Y+PL  G   GK
Sbjct:  124 PDSVRSQLETSLKRLQCPRVDLFYLHAPDHSTPVEETLRACHQLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVEAELLPCLRHFGLRFYAYNPLAGGLLTGK 244          
BLAST of FC875422 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.219e-12
Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 2
Query:   38 YNSPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLP--RENIQVATKFGFAELGLDAVIVKG-NPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWTRD-IENEIVPLCRELGIGIVPYSPL 577
            + S +S+E    ++  A+  G+  FDTA+ Y     E  LG  LK     R +  + TK  +   G  A   +G + +++    + SL RL +EY+D+ + +R D S P+EE +  M  ++ +G   Y G S  S   I  A+++       P    Q E   + R+ +E ++  L  ++G+G V +SPL
Sbjct:  101 FGSQISDETAEDLLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFW---GGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPVCEQAENHFFQREKVEMQLPELYHKIGVGSVTWSPL 287          
The following BLAST results are available for this feature:
BLAST of FC875422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
ARK72_HUMAN9.010e-1430.39Aflatoxin B1 aldehyde reductase member 2 OS=Homo s... [more]
YEAE_ECOLI2.621e-1328.57Uncharacterized protein yeaE OS=Escherichia coli (... [more]
Y2320_MYCBO4.471e-1330.89Uncharacterized oxidoreductase Mb2320 OS=Mycobacte... [more]
Y2298_MYCTU4.471e-1330.89Uncharacterized oxidoreductase Rv2298/MT2355 OS=My... [more]
ARK73_HUMAN4.471e-1328.78Aflatoxin B1 aldehyde reductase member 3 OS=Homo s... [more]
AAD10_YEAST5.840e-1328.95Putative aryl-alcohol dehydrogenase AAD10 OS=Sacch... [more]
YP088_YEAST7.627e-1328.44Putative aryl-alcohol dehydrogenase YPL088W OS=Sac... [more]
YDBC_ECOLI9.961e-1327.23Putative oxidoreductase ydbC OS=Escherichia coli (... [more]
ARK72_MOUSE1.699e-1236.36Aflatoxin B1 aldehyde reductase member 2 OS=Mus mu... [more]
KCAB3_RAT2.219e-1228.42Voltage-gated potassium channel subunit beta-3 OS=... [more]

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Properties
Property NameValue
Genbank descriptionC31403G04EF CTVClemen1 Citrus clementina cDNA clone C31403G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875422 ID=FC875422; Name=FC875422; organism=Citrus clementina; type=EST; length=642bp
AAAGCTGGGATTTGGATGCATGAGCCTGAGTGGAGGTTACAATTCTCCAG
TCTCTGAAGAGGATGGCATCTCTATAATAAAGCATGCTTTCAATAAAGGA
ATCACTTTCTTTGATACTGCTGATAAATATGGACCATATACTAATGAAAT
TCTTCTTGGAAAGGCCTTGAAGATGTTGCCCAGAGAAAACATACAAGTAG
CCACAAAGTTTGGGTTTGCAGAATTGGGACTTGATGCTGTGATCGTGAAG
GGTAACCCTGAGTATGTGCGCTCATGTTGTGAAGCTAGCTTGAAGCGCCT
TGATGTGGAATACATTGATCTGTATTATCAACATAGAGTGGACACATCAG
TCCCCATAGAGGAAACTATTGGCGAAATGAAAAAGCTGGTGGAAGAGGGT
AAAATCAAGTACATAGGATTATCTGAGGCTAGCCCAGATACAATTAGGAG
AGCACATGCTGTTCATCCTATCACAGCTGTACAACTGGAATGGTCTCTTT
GGACTCGTGACATTGAGAACGAGATAGTACCACTTTGCAGGGAGCTTGGC
ATTGGAATAGTTCCATACAGTCCTCTTGGTCGTGGATTTTTCGGTGGCAA
GCCGTTGTGGAAGTGTGCCTCAGATAGCTTTTTGAATTTCTT
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