FC875424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15_CHICK (60S ribosomal protein L15 (Fragment) OS=Gallus gallus GN=RPL15 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.237e-46 Identity = 98/161 (60.87%), Postives = 108/161 (67.08%), Query Frame = 2 Query: 206 RPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW-KRNQLSL 682 RPTRPDKARRLGYKAKQ YGKP + GV QLKF RS +SVAEERAGR G L+VLNSYW+ EDSTYK+FEVIL+D H IR +P WI KPVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W +RN L L Sbjct: 2 RPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKRIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQL 161
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15_PIG (60S ribosomal protein L15 (Fragment) OS=Sus scrofa GN=RPL15 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.575e-40 Identity = 87/150 (58.00%), Postives = 97/150 (64.67%), Query Frame = 2 Query: 239 GYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW-KRNQLSL 682 GYKAKQ YGKP + GV QLKF RS +SV EERAGR G L+VLNSYW+ EDSTYK+FEVIL+D H AIR +P WI KPVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W +RN L L Sbjct: 1 GYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVXEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQL 149
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_METJA (50S ribosomal protein L15e OS=Methanocaldococcus jannaschii GN=rpl15e PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.575e-40 Identity = 86/196 (43.88%), Postives = 116/196 (59.18%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 673 MG YKY+ E W++ + +R L R ++R+ P++VR+ RPTR D+AR LGYK KQ KP GV ++ +S + +AEERA RK ++VLNSYW+ ED +K++EVILVD H AI+ DP++NW+C H+ R RGLTSAGKK RGLR KG K RPS RA +R + Sbjct: 1 MGIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSK--KPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKGIGAEKVRPSIRAHGRRGK 194
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_METM7 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl15e PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.115e-38 Identity = 84/194 (43.30%), Postives = 113/194 (58.25%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 667 M Y YV E W+ + ++ LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L+VLNSYW+ +D K++EVILVD+ H +I++D NW+CK HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGTEKVRPSVRANSKK 192
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.115e-38 Identity = 84/194 (43.30%), Postives = 113/194 (58.25%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 667 M Y YV E W+ + ++ LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L+VLNSYW+ +D K++EVILVD+ H +I++D NW+CK HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGAEKVRPSVRANSKK 192
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_METM5 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl15e PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.115e-38 Identity = 83/196 (42.35%), Postives = 112/196 (57.14%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 673 M Y YV E W+ + ++ LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA +K ++VLNSYW+ +D K++EVILVD +I+ND NW+CK HK R RGLTSAGKK RGL KG KARPS RA K+ + Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVIRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATMGINKITMAKSIQRIAEERAAKKYPNMEVLNSYWVGQDGKQKWYEVILVDPCQPSIKNDKSYNWLCKGTHKGRVTRGLTSAGKKGRGLMYKGKGAEKARPSVRANGKKTK 194
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_THEON (50S ribosomal protein L15e OS=Thermococcus onnurineus (strain NA1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.050e-37 Identity = 84/190 (44.21%), Postives = 111/190 (58.42%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 655 MG YKY+ E W+ + + L + R ++R+ P +VRV RPTR D+AR LGY+AKQ KP+ G+ + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAG+K RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKKRMIKWRREPVVVRVERPTRLDRARSLGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGRKSRGLRNKGKGAEKVRPSVRA 188
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_THEGJ (50S ribosomal protein L15e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl15e PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.050e-37 Identity = 84/190 (44.21%), Postives = 111/190 (58.42%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 655 MG YKY+ E W+ + + L + R ++R+ P +VR+ RPTR D+AR LGY+AKQ KP+ G+ + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGELLKKRMIKWRREPVVVRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWITGKAHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSVRA 188
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_PYRHO (50S ribosomal protein L15e OS=Pyrococcus horikoshii GN=rpl15e PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.050e-37 Identity = 85/190 (44.74%), Postives = 111/190 (58.42%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 655 MG YKY+ E W+ + + L + R ++R+ PS+VR+ RPTR D+AR LGY+AKQ KP+ G + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGYIIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRA 188
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_PYRAB (50S ribosomal protein L15e OS=Pyrococcus abyssi GN=rpl15e PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.339e-37 Identity = 84/190 (44.21%), Postives = 111/190 (58.42%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 655 MG YKY+ E W+ + + L + R ++R+ P++VR+ RPTR D+AR LGY+AKQ KP+ G + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPAVVRIERPTRLDRARALGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRA 188 The following BLAST results are available for this feature:
BLAST of FC875424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875424 ID=FC875424; Name=FC875424; organism=Citrus clementina; type=EST; length=697bpback to top |