FC875424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15_QUESU (60S ribosomal protein L15 OS=Quercus suber GN=RPL15 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.054e-37 Identity = 93/200 (46.50%), Postives = 112/200 (56.00%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR-NQLSL 682 MGAYKYV+E+ R+KQSDV+RFL RVRCWEYRQ I R +RP+RPDKARRLGYKAKQ +GKP NQG+ QLKFQRS RS AEER R+ GGL++LNSYWI + + + L + P P L GK+ RGL G+G H K+ A WKR N+L L Sbjct: 1 MGAYKYVAEMERRKQSDVLRFLLRVRCWEYRQLNVIHRASRPSRPDKARRLGYKAKQGYVIYRVRVRRGNRKRPAPKGATFGKPVNQGINQLKFQRSLRSTAEERVARRCGGLRILNSYWITKTVSTSTLKSSLSTPSTRLSVVMPVSTGSATPYTSAENLAVSHPLGKQNRGL-GRGSKHTKS--PNHAFWKRTNKLFL 197
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_PYRFU (50S ribosomal protein L15e OS=Pyrococcus furiosus GN=rpl15e PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.989e-37 Identity = 84/190 (44.21%), Postives = 110/190 (57.89%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 655 MG YKY+ E W+ + + L + R ++R+ P +VR+ RPTR D+AR LGY+AKQ KP+ G + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGELLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSIRA 188
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_PYRKO (50S ribosomal protein L15e OS=Pyrococcus kodakaraensis GN=rpl15e PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.411e-36 Identity = 81/190 (42.63%), Postives = 109/190 (57.37%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 655 MG YKY+ E W+ + + L + R ++R+ P + R+ RPTR D+AR LGY+AKQ KP+ G+ + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGK+ RGL KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGELLKKRMIQWRRDPVVKRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGKRSRGLLNKGKGAEKVRPSIRA 188
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_STAMF (50S ribosomal protein L15e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36 Identity = 83/195 (42.56%), Postives = 110/195 (56.41%), Query Frame = 2 Query: 89 GAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 673 G Y Y+++LW++ M L R R ++R+ P+I+R+ +PTR D+AR LGYKAKQ +P G+ +S R +AEERA RK L+VLNSY++ ED YK++EVILVD H AI NDP I WIC+ H+ R RGLTSAGKK RGLR L + + + WKR Q Sbjct: 4 GMYHYIAQLWKRPYEGDMLTLMRQRLIKWRREPAIIRIEKPTRLDRARALGYKAKQGFIIVRVRVRKGGLRKQRPNK--GRRPKRMGIYGFAPSKSLRLIAEERAARKYPNLEVLNSYYVGEDGNYKWYEVILVDPHHPAICNDPDIKWICEKQHRRRVFRGLTSAGKKMRGLRKSRGLKY----TIKYKWKRKQ 192
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.876e-35 Identity = 78/196 (39.80%), Postives = 110/196 (56.12%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 673 M Y YV E W+ + ++ LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA ++ ++VLNSYW+ +D K++E+ILVD H +I+ND +W+ HK R RGLTSAGKK RGL KG KARP RA K+ + Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAEKARPGVRANGKKTK 194
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_METKA (50S ribosomal protein L15e OS=Methanopyrus kandleri GN=rpl15e PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.086e-34 Identity = 81/193 (41.97%), Postives = 109/193 (56.48%), Query Frame = 2 Query: 95 YKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 673 YKY E W++ + + L + R ++R+ PS+ R+ RPTR ++ARRLGY+AK +P G + +SK+ +AEERA RK L+VLNSYW+ ED YKY+EVI+VD H I++D RINWIC+ K R RG T AGKK RGLR +G K RPS RA +R + Sbjct: 7 YKYQREAWKRPKDSYVGELLKERLPKWRKGPSVQRIKRPTRIERARRLGYRAKPGYVVVRVRVPKGGRRKSRPKK--GRRPKRMGKNKFSPGKSKQWIAEERAQRKYPNLEVLNSYWVGEDGQYKYYEVIMVDPYHPQIKSDHRINWICQKSQKGRVFRGKTGAGKKARGLRKRGKGAEKVRPSLRAHRRRGK 197
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_DESK1 (50S ribosomal protein L15e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl15e PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.420e-34 Identity = 86/201 (42.79%), Postives = 114/201 (56.72%), Query Frame = 2 Query: 95 YKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKY------RGLRGKGHLHHKARPSRRATWKRNQLS 679 Y Y++E W++K + + L R R E+R+ PS+VR+ +PTR DKAR LGYKAK +P GV +S R +AEERA RK GL+VLNSY++ ED YK++EVILVD H +I NDP +NWIC+P ++ R RGLTSAGKK RGLRG + K + R KR++ S Sbjct: 6 YHYIAEAWKEKSRE-LEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDS--GRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFRGLTSAGKKMRGLRKSRGLRGTVYYKWKRKLKERELKKRHEAS 203
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_AERPE (50S ribosomal protein L15e OS=Aeropyrum pernix GN=rpl15e PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33 Identity = 84/204 (41.18%), Postives = 108/204 (52.94%), Query Frame = 2 Query: 86 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLR------GKGHLHHKARPSRRATWKRNQLS 679 + Y Y++ W+K + L + R E+R+ PSI+RV +PTR D+AR LGYKAKQ +P GV +S R +AEERA RK L VLNSY++ ED YK++EVILVD H AI+NDP +NW+ HK R RGLTSAGKK RGLR G K + R KR++ S Sbjct: 3 LSMYHYIAREWKKPYEGLHGELMKARLLEWRRQPSILRVEKPTRLDRARALGYKAKQGVIVARVRVRKGGRRKPRPNK--GRRPKRMGVYGFAPAKSLRLIAEERAQRKYPNLVVLNSYYVGEDGRYKWYEVILVDPNHPAIKNDPELNWVTTGKHKGRPFRGLTSAGKKMRGLRKSRGLKGTHKYKWKKKAKERILRKRHEAS 204
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_METTH (50S ribosomal protein L15e OS=Methanobacterium thermoautotrophicum GN=rpl15e PE=3 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33 Identity = 76/182 (41.76%), Postives = 102/182 (56.04%), Query Frame = 2 Query: 95 YKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKAR 640 Y+YV + W+ + +R L R ++R+ P I R+ RPTR D+AR LGY+AK +PT GV ++ +S + +AEER RK ++VLNSYW+ ED YK++EVILVD H AI+NDP+I WIC H+ R RGL S GKK RGLR +G K R Sbjct: 3 YRYVKDAWKNPKDSYVRELMWERAPKWRRDPVIKRIERPTRIDRARALGYRAKPGYIVVRTRVRRGSQRKTRFK--AGRRPTRMGVKKITTAKSIKRIAEERVARKYPNMEVLNSYWVWEDGKYKFYEVILVDPNHLAIKNDPKIYWICVKQHRGRVFRGLISEGKKNRGLRNRGKGAEKVR 182
BLAST of FC875424 vs. ExPASy Swiss-Prot
Match: RL15E_METST (50S ribosomal protein L15e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl15e PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33 Identity = 78/183 (42.62%), Postives = 103/183 (56.28%), Query Frame = 2 Query: 95 YKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKAR 640 YKY+ E W+ ++ L R R ++R+ P I+R+ +PTR D+ARRLGYKAK G+ P GV ++ ++S + +AEER RK L+VLNSYW+ ED KY+EVILVD +I++D +INWIC H R RGLTSAGKK RGL KG K R Sbjct: 7 YKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFKN---GRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRRAFRGLTSAGKKGRGLNKKGKGAEKVR 186 The following BLAST results are available for this feature:
BLAST of FC875424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875424 ID=FC875424; Name=FC875424; organism=Citrus clementina; type=EST; length=697bpback to top |