FC875434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB2_MOUSE (Prohibitin-2 OS=Mus musculus GN=Phb2 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41 Identity = 92/194 (47.42%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 136 YATTHSLYNVEGGHRAIMFNRIVGVK-DKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 Y S++ VEGGHRAI FNRI GV+ D + EG H IPWF+ P+IYD+RARP + S TGS DLQMV I LRVL+RP A +LP++Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR SL + F + LDDV+IT L+F +E+T A+E Sbjct: 34 YGVRESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLI-----------------------------RRELTERAKDFSLILDDVAITELSFSREYTAAVE 198
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB2_HUMAN (Prohibitin-2 OS=Homo sapiens GN=PHB2 PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41 Identity = 92/194 (47.42%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 136 YATTHSLYNVEGGHRAIMFNRIVGVK-DKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 Y S++ VEGGHRAI FNRI GV+ D + EG H IPWF+ P+IYD+RARP + S TGS DLQMV I LRVL+RP A +LP++Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR SL + F + LDDV+IT L+F +E+T A+E Sbjct: 34 YGVRESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLI-----------------------------RRELTERAKDFSLILDDVAITELSFSREYTAAVE 198
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB_HUMAN (Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.796e-40 Identity = 90/188 (47.87%), Postives = 119/188 (63.30%), Query Frame = 1 Query: 151 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 +LYNV+ GHRA++F+R GV+D V EGTH +IPW ++P+I+D R+RP V TGS DLQ V I LR+L RPVA QLP I+ ++GE+Y+ERVLPSI E LK+VVA+++A +LITQRE+ S S+D + F + LDDVS+T LTFGKEFT A+E Sbjct: 26 ALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQV-----------------------------SDDLTERAATFGLILDDVSLTHLTFGKEFTEAVE 184
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB_BOVIN (Prohibitin OS=Bos taurus GN=PHB PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.796e-40 Identity = 90/188 (47.87%), Postives = 119/188 (63.30%), Query Frame = 1 Query: 151 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 +LYNV+ GHRA++F+R GV+D V EGTH +IPW ++P+I+D R+RP V TGS DLQ V I LR+L RPVA QLP I+ ++GE+Y+ERVLPSI E LK+VVA+++A +LITQRE+ S S+D + F + LDDVS+T LTFGKEFT A+E Sbjct: 26 ALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQV-----------------------------SDDLTERAATFGLILDDVSLTHLTFGKEFTEAVE 184
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB2_BOVIN (Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.345e-40 Identity = 92/194 (47.42%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 136 YATTHSLYNVEGGHRAIMFNRIVGVK-DKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 Y S++ VEGGHRAI FNRI GV+ D + EG H IPWF+ P+IYD+RARP + S TGS DLQMV I LRVL+RP A +LP++Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR SL + F + LDDV+IT L+F +E+T A+E Sbjct: 34 YGIRESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAMELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLI-----------------------------RRELTERAKDFSLILDDVAITELSFSREYTAAVE 198
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB_CHICK (Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.063e-40 Identity = 89/188 (47.34%), Postives = 118/188 (62.77%), Query Frame = 1 Query: 151 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 +LYNV+ GHRA++F+R GV+D V EGTH +IPW ++P+I+D R+RP + TGS DLQ V I LR+L RPV QLP I+ ++GE+Y+ERVLPSI E LK+VVA+++A +LITQRE+ S SED + F + LDDVS+T LTFGKEFT A+E Sbjct: 26 ALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQV-----------------------------SEDLTERAATFGLILDDVSLTHLTFGKEFTEAVE 184
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB2_CHICK (Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.911e-40 Identity = 92/194 (47.42%), Postives = 117/194 (60.31%), Query Frame = 1 Query: 136 YATTHSLYNVEGGHRAIMFNRIVGVK-DKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 Y S++ VEGG RAI FNRI GV+ D + EG H IPWF+ P+IYD+RARP + S TGS DLQMV I LRVLTRP A +LP++Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR SL + F + LDDV+IT L+F +E+T A+E Sbjct: 34 YGVRESVFIVEGGQRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLTRPNAAELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLI-----------------------------RRELTERAKDFSLILDDVAITELSFSREYTAAVE 198
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB1_SCHPO (Prohibitin-1 OS=Schizosaccharomyces pombe GN=phb1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.681e-38 Identity = 87/188 (46.28%), Postives = 118/188 (62.77%), Query Frame = 1 Query: 151 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 S+Y+V GG RA++F+R+ GV+ +V EGTH +IPW ++ ++YDVR RP + +TTGS DLQMV + LRVL RP LP IY+ LG +Y+ERVLPSI +E LK+VVAQ++A++LITQREV S ++ + F I L+DVSIT +TFGKEFT A+E Sbjct: 25 SIYDVPGGKRAVLFDRLSGVQKQVVQEGTHFLIPWLQKAIVYDVRTRPRNIATTTGSKDLQMVSLTLRVLHRPEVGMLPQIYQNLGLDYDERVLPSIGNEILKSVVAQFDAAELITQREVVSAKI-----------------------------RQELVQRATEFGIRLEDVSITHMTFGKEFTKAVE 183
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB1_CAEEL (Mitochondrial prohibitin complex protein 1 OS=Caenorhabditis elegans GN=phb-1 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.867e-38 Identity = 85/188 (45.21%), Postives = 120/188 (63.83%), Query Frame = 1 Query: 151 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 +LYNV+GG RA++F+R GVK++V EGTH +IPW ++P+I+D+R+ P V + TGS DLQ V I LR+L RP D+LP IY +G +Y ERVLPSI +E LKAVVAQ++A ++ITQREV S S+++ ++ + F + LDD++IT L FG+EFT A+E Sbjct: 29 ALYNVDGGQRAVIFDRFSGVKNEVVGEGTHFLIPWVQKPIIFDIRSTPRAVTTITGSKDLQNVNITLRILHRPSPDRLPNIYLNIGLDYAERVLPSITNEVLKAVVAQFDAHEMITQREVVSQRA----------SVALRER-------------------AAQFGLLLDDIAITHLNFGREFTEAVE 187
BLAST of FC875434 vs. ExPASy Swiss-Prot
Match: PHB1_YEAST (Prohibitin-1 OS=Saccharomyces cerevisiae GN=PHB1 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.858e-37 Identity = 83/189 (43.92%), Postives = 118/189 (62.43%), Query Frame = 1 Query: 148 HSLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREVSSLACSF*PGFS*C*SLSMIDQ*AFHLLDCK*GNSEDSD*EGSLFHIALDDVSITSLTFGKEFTFAIE 714 +S+Y+V+GG R ++F+RI GVK +V EGTH ++PW ++ +IYDVR +P + + TG+ DLQMV + LRVL RP QLP IY+ LG +Y+ERVLPSI +E LK++VAQ++A++LITQRE+ S ++ + F I L+DVSIT +TFG EFT A+E Sbjct: 27 YSMYDVKGGSRGVIFDRINGVKQQVVGEGTHFLVPWLQKAIIYDVRTKPKSIATNTGTKDLQMVSLTLRVLHRPEVLQLPAIYQNLGLDYDERVLPSIGNEVLKSIVAQFDAAELITQREIISQKI-----------------------------RKELSTRANEFGIKLEDVSITHMTFGPEFTKAVE 186 The following BLAST results are available for this feature:
BLAST of FC875434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875434 ID=FC875434; Name=FC875434; organism=Citrus clementina; type=EST; length=715bpback to top |