FC875435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875435 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.142e-25 Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 327 ATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFA-FKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLITRLTYTLDEIEGPFEVSPDGTIKFVEKDGM 689 A +A ++ A G LT+DEIQ TY++VKG+G AN CP ++ G + K G Y+ + FC+EPTSFTVK E K +F TKL+TRLTYTLD + G F+V DG+ + E DG+ Sbjct: 34 AAAAAALATAMVAGSANALTFDEIQGLTYLQVKGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGI 155
BLAST of FC875435 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.546e-22 Identity = 57/129 (44.19%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 309 IAGFALATSALVVSGASAEGV-PKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDS-FAFKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLITRLTYTLDEIEGPFEVSPDGTIKFVEKDGM 689 +AG A A ++ A A LTYDE+QS +Y+EVK +G A CP + GV S + K GKY+ +CLEP+SF VK K +F+ TKL+TRLTYTLD I V DG+ EKDG+ Sbjct: 71 LAGAGRAMGAALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGVSSKLSLKAGKYEINNWCLEPSSFQVKLPPTEKQQVTEFERTKLMTRLTYTLDAISADLNVGGDGSWTIQEKDGL 199
BLAST of FC875435 vs. ExPASy Swiss-Prot
Match: PSBO_THEEB (Photosystem II manganese-stabilizing polypeptide OS=Thermosynechococcus elongatus (strain BP-1) GN=psbO PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.939e-16 Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 399 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLITRLTYTLDEIEGPFEVSPDGTIKFVEKDGMTM--LL*QFTGWSDVCLPFT 743 Q+ TY ++ GTG AN+CPT+D ++ + Y+ + CL+PT+F VK E NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DG+ + Q G + L FT Sbjct: 29 QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFT 147
BLAST of FC875435 vs. ExPASy Swiss-Prot
Match: PSBO_SYNEN (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus naegeli GN=psbO PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.939e-16 Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 399 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLITRLTYTLDEIEGPFEVSPDGTIKFVEKDGMTM--LL*QFTGWSDVCLPFT 743 Q+ TY ++ GTG AN+CPT+D ++ + Y+ + CL+PT+F VK E NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DG+ + Q G + L FT Sbjct: 29 QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFT 147
BLAST of FC875435 vs. ExPASy Swiss-Prot
Match: PSBO_ANASP (Photosystem II manganese-stabilizing polypeptide OS=Anabaena sp. (strain PCC 7120) GN=psbO PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14 Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 408 TYMEVKGTGTANQCP----TIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLITRLTYTLDEIEGPFEVSPDGTIKFVEKDGM 689 TY +++GTG AN+CP T G + + K Y K+ CLEPT+F VK E NK +F KL+TR T T+D++ G + + D ++ FVEKDG+ Sbjct: 34 TYEQIRGTGLANKCPQLTETSRGSIPLDSSK--SYVLKELCLEPTNFFVKEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGL 129
BLAST of FC875435 vs. ExPASy Swiss-Prot
Match: PSBO_SYNY3 (Photosystem II manganese-stabilizing polypeptide OS=Synechocystis sp. (strain PCC 6803) GN=psbO PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12 Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 3 Query: 408 TYMEVKGTGTANQCPTIDGGV-DSFAFKPG-KYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLITRLTYTLDEIEGPFEVSPDGTIKFVEKDGM 689 TY ++ TG AN CP I + +P KY FC+EP + VK E VNK ++ K++TR T +L++I G V DGT+ F EKDG+ Sbjct: 35 TYDDIVNTGLANVCPEISSFTRGTIEVEPNTKYFVSDFCMEPQEYFVKEEPVNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGI 130
BLAST of FC875435 vs. ExPASy Swiss-Prot
Match: PSBO_CYAA5 (Photosystem II manganese-stabilizing polypeptide OS=Cyanothece sp. (strain ATCC 51142) GN=psbO PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.977e-11 Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 3 Query: 399 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLITRLTYTLDEIEGPFEVSPDGTIKFVEKDGM 689 Q TY E+ TG AN+CP I S +PG+ Y CLEP + VK E VNK ++ KL+TR T +L++I G V DG + F E+ G+ Sbjct: 32 QDLTYDEILNTGLANKCPQISEFTRGSIPIEPGQTYFVDDLCLEPQEYFVKEEPVNKRQEAEYVPGKLLTRYTTSLEQISGKITVDEDGVVTFYEEGGI 130
BLAST of FC875435 vs. ExPASy Swiss-Prot
Match: PSBO_SYNE7 (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus (strain PCC 7942) GN=psbO PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11 Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 3 Query: 384 TYDEIQSKTYMEVKGTGTANQCPTI-DGGVDSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLITRLTYTLDEIEGPFEVSPDGTIKFVEKDGM 689 T ++ + TY ++K TG AN+C ++ + + + GK Y CLEP F VK E NK +F K++TR T +LD++ G + DGT+ F EK G+ Sbjct: 26 TAADLGTLTYDQIKDTGLANKCLSLKESARGTIPLEAGKKYALTDLCLEPQEFFVKEEPGNKRQKAEFVPGKVLTRYTSSLDQVYGDLALKADGTVSFTEKGGI 129 The following BLAST results are available for this feature:
BLAST of FC875435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875435 ID=FC875435; Name=FC875435; organism=Citrus clementina; type=EST; length=764bpback to top |