FC875438

Overview
NameFC875438
Unique NameFC875438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:11..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP5 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.437e-29
Identity = 74/164 (45.12%), Postives = 96/164 (58.54%), Query Frame = 3
Query:  204 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            F  +I  + +   LT  EA A+ D +++ EA  + + A L+ LR +GET  EI G   AM      V    DAVD+VGTGGDG+ +VN+ST A+ + A CGA VAK             DVL ALGV ID+ P+ V RC+ EAGIGFM +  +HPAMK V P R
Sbjct:    4 FKSIIGKVATGATLTRDEATAAFDAMMSGEATPSQMGALLMGLRVRGETVDEIAGAVSAMRAKMLTVTAPPDAVDVVGTGGDGSGSVNVSTCAAFIVAGCGAPVAKHGNRALSSRSGAADVLAALGVKIDITPDQVGRCIAEAGIGFMFAPTHHPAMKNVGPTR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_DESAA (Anthranilate phosphoribosyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.437e-29
Identity = 70/167 (41.92%), Postives = 100/167 (59.88%), Query Frame = 3
Query:  204 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKS 698
            F+EL+  ++S  DL E E    +D +++ E +   I+AF+  L  KGETF E+ G AR+M + AT+++      VD  GTGGDGA+T NIST ++ + A CG  VAK             DVLEALGV +D  PE V + ++E GIGF+ +  YH AM+F  P R++
Sbjct:    2 FSELLKKIVSGQDLAEDETTTMMDAIMSGEVEVPAIAAFMAALATKGETFTELAGAARSMRRKATRIQVSSNTVVDTCGTGGDGASTFNISTTSAFVVAGCGVTVAKHGNRSVSSKCGSADVLEALGVKLDTHPEVVEQGIEEIGIGFLFAPMYHSAMRFAMPARQA 168          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_METMA (Anthranilate phosphoribosyltransferase OS=Methanosarcina mazei GN=trpD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.452e-29
Identity = 74/164 (45.12%), Postives = 98/164 (59.76%), Query Frame = 3
Query:  210 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E I  L    DL+  EA+A+L+ +L+ A++  I  FL+ L+AKGE   EIVG  R M K    ++       VD  GTGGDG NT+N+ST A+I+ AA G  VAK             DVLEALG+ +DL PE VR+ +++ GIGFM +  +HPAMK V  VRK
Sbjct:    6 EYIKKLEEGCDLSSEEAEAALEEVLSTAEDGEIETFLLALKAKGEKPQEIVGFVRGMKKAGNMIKPNTPFRIVDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGNRAATSMTGSSDVLEALGIKVDLSPEYVRKTIEKIGIGFMFAPVFHPAMKRVAGVRK 169          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_SYMTH (Anthranilate phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.202e-29
Identity = 72/154 (46.75%), Postives = 95/154 (61.69%), Query Frame = 3
Query:  240 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            DLTEA+A+A++  ++  EA  A ++AFL+ LR KGET  EI G AR M + A ++       VD  GTGGDG++T NIST A+ + A  G  VAK             DVLEALG+ +DL PE V RC+DE GIGF+ +   H +MK V PVR+
Sbjct:   13 DLTEAQAEAAMTLMMTGEATPAQVAAFLMALRIKGETVAEITGAARVMRERAIRIHHSRPLVVDTCGTGGDGSHTFNISTTAAFVVAGAGVAVAKHGNRAATSLTGSADVLEALGIHLDLTPEEVGRCIDEVGIGFLYAPALHTSMKHVAPVRR 166          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPS (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.202e-29
Identity = 74/164 (45.12%), Postives = 95/164 (57.93%), Query Frame = 3
Query:  204 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            F  +I  + +   LT  EA ++ D +++ +A  + + A L+ LR +GET  EI G    M      V+   DAVDIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL ALGV ID+ PE V RCV EAGIGFM +  +HPAMK V P R
Sbjct:    4 FKAIIAKVATGATLTRDEAASAFDGMMSGDATPSQMGALLMGLRVRGETVDEITGAVSTMRAKMLTVDAPADAVDIVGTGGDGSGSVNVSTCASFIVAGCGVPVAKHGNRALSSKSGAADVLNALGVRIDITPEHVGRCVTEAGIGFMFAPTHHPAMKNVGPTR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_SALAI (Anthranilate phosphoribosyltransferase OS=Salinispora arenicola (strain CNS-205) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29
Identity = 74/167 (44.31%), Postives = 101/167 (60.48%), Query Frame = 3
Query:  210 ELIDCLISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD----AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            +L+  L+   +L+ A+ A A  + +   A  A I+ F + LRAKGET  E+ GL  AM+++A +VE   D    AVD+VGTGGD A+TVNIST AS++ A  G +V K             DVLE LG+ +DL PEGV  CV EAGIGF  + ++HP M+   PVR+
Sbjct:    8 QLLAALLRGDELSTADTAWAMGEIMSGSAGSAQIAGFAIALRAKGETPAEVSGLVEAMLQHAVRVELPEDLRATAVDVVGTGGDLAHTVNISTMASLVVAGAGVRVVKHGNRAASSSCGTADVLEFLGLPLDLGPEGVAACVAEAGIGFCFAARFHPGMRHAGPVRR 174          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_RHOSR (Anthranilate phosphoribosyltransferase OS=Rhodococcus sp. (strain RHA1) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29
Identity = 78/175 (44.57%), Postives = 106/175 (60.57%), Query Frame = 3
Query:  174 SDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            +D  RP    +  ++  L    DL+  EA+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A KV    D VDIVGTGGD +NTVNIST AS++ AA G +V K             DVLEALGV I+L P+ V RCV E GIGF  +  +HPA++F    RK
Sbjct:   10 NDGVRPART-WPSVLGTLTDGRDLSVDEAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIGFCFAPVFHPALRFAGAPRK 183          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPA (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29
Identity = 74/164 (45.12%), Postives = 94/164 (57.32%), Query Frame = 3
Query:  204 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            F  +I  + +   LT  EA  + D +++ +A  + + A L+ LR +GET  EI G    M      V    DAVDIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL ALGV ID+ PE V RCV+EAGIGFM +  +HPAMK V P R
Sbjct:    4 FKSIIAKVATGATLTRDEATDAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLPVTAPADAVDIVGTGGDGSGSVNVSTCASFVVAGCGVTVAKHGNRALSSKSGAADVLAALGVKIDITPEQVGRCVNEAGIGFMFAPTHHPAMKNVGPTR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_ROSS1 (Anthranilate phosphoribosyltransferase OS=Roseiflexus sp. (strain RS-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 72/153 (47.06%), Postives = 92/153 (60.13%), Query Frame = 3
Query:  240 DLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            DL+E +A  +++ ++   A  A ++A L  L  KGET  EI G+AR M   A  V      +D  GTGGDGA T NIST A+ +AA  GA VAK             DVLE LGV I+LD   V RC+D+AGIGFM + K+HPAM+FV PVR+
Sbjct:   15 DLSEDQAAEAMEEIMTGMATPAQVAALLTALHLKGETDAEIAGMARVMRAKAIPVHFDAPLLDTCGTGGDGAGTFNISTTAAFIAAGAGAIVAKHGNRAMSSVCGSADVLEGLGVNIELDAASVARCLDQAGIGFMFAQKFHPAMRFVGPVRR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPB (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 72/164 (43.90%), Postives = 94/164 (57.32%), Query Frame = 3
Query:  204 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            F  +I  L + V L+  E+  + D +++ EA  + + A L+ LR +GET  EI G   AM     +V    DAVD+VGTGGDG+ +VN+ST AS + A  G  VAK             DVL ALGV ID+ P  V RC+ EAGIGFM +  +HPAMK V P R
Sbjct:    4 FKSIIGKLATGVTLSREESAGAFDAMMSGEATPSQMGALLMALRVRGETVEEITGAVAAMRSKMLRVTAPADAVDVVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVKIDITPAEVGRCIKEAGIGFMFAPTHHPAMKNVGPTR 167          
The following BLAST results are available for this feature:
BLAST of FC875438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_RHOP51.437e-2945.12Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_DESAA1.437e-2941.92Anthranilate phosphoribosyltransferase OS=Desulfat... [more]
TRPD_METMA2.452e-2945.12Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_SYMTH3.202e-2946.75Anthranilate phosphoribosyltransferase OS=Symbioba... [more]
TRPD_RHOPS3.202e-2945.12Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_SALAI7.134e-2944.31Anthranilate phosphoribosyltransferase OS=Salinisp... [more]
TRPD_RHOSR7.134e-2944.57Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_RHOPA7.134e-2945.12Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_ROSS19.318e-2947.06Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_RHOPB9.318e-2943.90Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]

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Properties
Property NameValue
Genbank descriptionC31403H10EF CTVClemen1 Citrus clementina cDNA clone C31403H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875438 ID=FC875438; Name=FC875438; organism=Citrus clementina; type=EST; length=721bp
GGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCCATTT
AATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAAACTG
TGGATTTACGACTGCGGGTACTAATCCGAGATGCAGAGAATTAACTGCTA
TTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAACGCCC
TGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGA
GGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGG
CCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTT
GGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGT
GGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTG
CAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGT
GGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGG
AAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAG
AGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCG
ACNAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAGCTC
AAAGTAAAACTGTATTCATAT
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