FC875438
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BURMS (Anthranilate phosphoribosyltransferase OS=Burkholderia mallei (strain SAVP1) GN=trpD PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 65/133 (48.87%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 303 LISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 + +A + LR K ET GEI A M ++A +VE +A VDIVGTGGDG++T NIST +AAA GAKVAK DVLEALGV IDL PE V + E G+GFM + +HPAM+ + PVR+ Sbjct: 39 MAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAPVRR 171
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BURMA (Anthranilate phosphoribosyltransferase OS=Burkholderia mallei GN=trpD PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 65/133 (48.87%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 303 LISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 + +A + LR K ET GEI A M ++A +VE +A VDIVGTGGDG++T NIST +AAA GAKVAK DVLEALGV IDL PE V + E G+GFM + +HPAM+ + PVR+ Sbjct: 39 MAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAPVRR 171
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BURM9 (Anthranilate phosphoribosyltransferase OS=Burkholderia mallei (strain NCTC 10229) GN=trpD PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 65/133 (48.87%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 303 LISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 + +A + LR K ET GEI A M ++A +VE +A VDIVGTGGDG++T NIST +AAA GAKVAK DVLEALGV IDL PE V + E G+GFM + +HPAM+ + PVR+ Sbjct: 39 MAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAPVRR 171
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BURM7 (Anthranilate phosphoribosyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=trpD PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 65/133 (48.87%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 303 LISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 + +A + LR K ET GEI A M ++A +VE +A VDIVGTGGDG++T NIST +AAA GAKVAK DVLEALGV IDL PE V + E G+GFM + +HPAM+ + PVR+ Sbjct: 39 MAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAPVRR 171
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_AGRT5 (Anthranilate phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=trpD PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 65/151 (43.05%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 243 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692 L +A+ + D L++ EA + I FL+ LR +GET EIVG +M V +A+DIVGTGGDG T NIST ASI+ A G VAK D L ALGV +D+ P+ + RC+ EAG+GFM + +H AM+ V P R Sbjct: 17 LNREDARTAFDILMSGEATPSQIGGFLMALRVRGETVDEIVGAVSSMRARMLPVSAPANAIDIVGTGGDGIGTYNISTLASIITAGTGLPVAKHGNRALSSKSGTADALSALGVRLDIGPDLIARCIAEAGLGFMFAQMHHSAMRHVGPSR 167
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_ACISJ (Anthranilate phosphoribosyltransferase OS=Acidovorax sp. (strain JS42) GN=trpD PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 70/172 (40.70%), Postives = 96/172 (55.81%), Query Frame = 3 Query: 189 PLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 P+TP E + I ++ E + +++ E + +A LR K ET GEI A+ M +++ KV+ VDIVGTGGDGANT NIST A+ + AA GAKV+K D +EALGV I+L P + +C+ + GIGFM + +HPAMK V PVRK Sbjct: 3 PITP--QEALQRTIEHREIFHDEMLHLMRMIMSGELSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPVRK 172
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_RHIME (Anthranilate phosphoribosyltransferase OS=Rhizobium meliloti GN=trpD PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 64/155 (41.29%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 231 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692 +R L+ +A+A+ + +++ A + I FL+ LR +GET EIVG AM VE A+DIVGTGGDGA T NIST A+++ A G VAK D L LGV +D+ P + RC+ EAG+GFM + ++H AM+ V P R Sbjct: 13 AREALSREDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLPVEAPDGAIDIVGTGGDGAGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGTADALSCLGVNLDIGPAVISRCIAEAGLGFMFAQQHHSAMRHVGPTR 167
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=trpD PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 67/164 (40.85%), Postives = 92/164 (56.10%), Query Frame = 3 Query: 210 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 E ++ ++ ++DLT E QA + ++ + +A + AFL+ +R K ET EIVG + M + A V D VD GTGGDG N N+ST AS + AA G KVAK D+LEA GV +DL PE V R VD G+GFM + +H AMK+ R+ Sbjct: 5 EALNRIVGQLDLTTEEMQAVMRQIMTGQCTDAQVGAFLMGMRMKSETIDEIVGAVQVMRELAAPVRFDTDKLVDTCGTGGDGMNIFNVSTAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVFLDLTPEQVARSVDTVGVGFMFAPAHHGAMKYAAGPRR 168
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU2 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpD PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 67/160 (41.88%), Postives = 90/160 (56.25%), Query Frame = 3 Query: 225 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 +++++DLT E + + + + EA I AFL+ +R K ET EIVG M + A KVE L VDIVGTGGDGAN N+ST ++ + AA G VAK D+LEA GV ++L P V RC+D GIGFM + +H AMK R+ Sbjct: 14 VVNQLDLTTEEMSDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELAGKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFMFAQSHHTAMKHTAGPRR 173
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPU (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida GN=trpD PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 66/160 (41.25%), Postives = 90/160 (56.25%), Query Frame = 3 Query: 225 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 ++ ++DLT E + + ++ + EA I AFL+ +R K E+ EIVG M + A KVE L VDIVGTGGDGAN N+ST +S + AA G VAK D+LEA G+ ++L P V RC+D GIGFM + +H AMK R+ Sbjct: 10 IVGQLDLTTEEMRDVMRQIMTGQCTEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMKHAAGPRR 169 The following BLAST results are available for this feature:
BLAST of FC875438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875438 ID=FC875438; Name=FC875438; organism=Citrus clementina; type=EST; length=721bpback to top |