FC875438
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_MYCGI (Anthranilate phosphoribosyltransferase OS=Mycobacterium gilvum (strain PYR-GCK) GN=trpD PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 72/183 (39.34%), Postives = 100/183 (54.64%), Query Frame = 3 Query: 159 PQPAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 P+PA TP + ++ L + L + ++D ++ A A I+AF V ++ K T E+ LA M+K+A V + +G VDIVGTGGDGANTVN+ST ASI+ AA G V K D LEALG+ IDL P+ V RCV E GIGF + ++HP+ + VR+ Sbjct: 6 PRPAAPTTDPGDTPTWAMILGRLTTGQSLLPGQTAWAMDQIMTGVATPAQIAAFAVSMKMKRPTSAEVTELAEIMLKHALPVPTDTIGTHTVDIVGTGGDGANTVNLSTMASIVVAAAGVPVVKHGNRAASSLSGGADTLEALGLRIDLGPDDVARCVAEVGIGFAFAPQFHPSYRHAGAVRR 188
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PSEFS (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=trpD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 64/160 (40.00%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 225 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 ++ +DL+ AE + + + + +A I AF++ +R K E+ EIVG M + A KVE L VD+VGTGGDGAN N+ST +S + AA G VAK D+LEA G+ ++L P V RC+D GIGFM + +H AMK RK Sbjct: 10 IVGHLDLSTAEMSDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQSHHGAMKHAAGPRK 169
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PSEF5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 62/160 (38.75%), Postives = 92/160 (57.50%), Query Frame = 3 Query: 225 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 ++ +DL+ E ++ + + + + +A I AF++ +R K E+ EIVG AM + A +VE L VD+VGTGGDGAN N+ST +S + AA G VAK D+LEA G+ ++L P V RC+D GIGFM + +H AMK+ R+ Sbjct: 10 IVGHLDLSTEEMRSVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSAMRELADRVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQSHHGAMKYAAGPRR 169
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_EUBE2 (Anthranilate phosphoribosyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=trpD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 68/163 (41.72%), Postives = 93/163 (57.06%), Query Frame = 3 Query: 210 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 E I L+ + DLT + ++ ++ EA +A +AFL L AKGET EI AR + + K D ++IVGTGGDG+N++NIST ASI+ +A G VAK D LEALGV ID P + + + + I F+ + KYHPAM+FV VRK Sbjct: 4 EAIAKLVKKEDLTAGQMNDVMEEIMTGEATDAQKAAFLTALAAKGETIDEITAAARVLRAHCEKFLNDMDVLEIVGTGGDGSNSINISTLASIIVSAAGIPVAKHGNRAASSKCGTADCLEALGVKIDAAPARMAQILKDINICFLFAQKYHPAMRFVGGVRK 166
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_CHLT3 (Anthranilate phosphoribosyltransferase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=trpD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 64/130 (49.23%), Postives = 78/130 (60.00%), Query Frame = 3 Query: 306 ISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 I+AFLVLLR +GE EI G ARA++ +A + GD +D GTGGDGANT NIST AS++A ACG KVAK DVLEA+G IDL + E G F+ + +H AMK V PVRK Sbjct: 38 IAAFLVLLRQRGEEVEEIYGAARAILNHAEQPILEGDPIDTCGTGGDGANTFNISTAASLIAHACGVKVAKHGNRSISSRCGSADVLEAMGFKIDLPKKETEELFKETGFVFLFAPIFHKAMKNVAPVRK 167
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BURXL (Anthranilate phosphoribosyltransferase OS=Burkholderia xenovorans (strain LB400) GN=trpD PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 65/138 (47.10%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 288 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695 E + +A + LR K ET GEI A M ++A VE ++ VDIVGTGGDG++T NIST ++AA GAKVAK DVLEALGV IDL PE V + E G+GFM + +HPAMK + PVR+ Sbjct: 34 ELSPVMAAAIITGLRVKKETIGEITAAATVMREFARHVEVQDNSNFVDIVGTGGDGSHTFNISTATMFVSAAAGAKVAKHGGRSVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMKNIAPVRR 171
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_VIBVU (Anthranilate phosphoribosyltransferase OS=Vibrio vulnificus GN=trpD PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.250e-25 Identity = 65/166 (39.16%), Postives = 94/166 (56.63%), Query Frame = 3 Query: 213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704 +I+ L + LTE E+Q D ++ E D L+++ L L+ KGET EI G A+A++ A D DIVGTGGDG NT+NIST A+ +AAACG KVAK D+L++ G+ + + E R VD G+ F+ + +YH +K PVR++ K Sbjct: 4 IINKLYQQASLTEQESQQLFDTIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANAQPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRSAVDNIGVAFLFAPQYHSGVKHAMPVRQTMK 169
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_VIBCH (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae GN=trpD PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.250e-25 Identity = 63/166 (37.95%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704 +I+ L + LT+AE+Q D ++ E D L++A L L+ KGET EI G A+A++ A D DIVGTGGDG+NT+NIST A+ +AAACG KVAK D+L + G+ + + + R+ +D+ G+ F+ + +YH ++ PVR++ K Sbjct: 4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGVAFLFAPQYHGGVRHAMPVRQTMK 169
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_VIBC3 (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=trpD PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.250e-25 Identity = 63/166 (37.95%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704 +I+ L + LT+AE+Q D ++ E D L++A L L+ KGET EI G A+A++ A D DIVGTGGDG+NT+NIST A+ +AAACG KVAK D+L + G+ + + + R+ +D+ G+ F+ + +YH ++ PVR++ K Sbjct: 4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGVAFLFAPQYHGGVRHAMPVRQTMK 169
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_SINMW (Anthranilate phosphoribosyltransferase OS=Sinorhizobium medicae (strain WSM419) GN=trpD PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.250e-25 Identity = 62/155 (40.00%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 231 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692 +R L+ +A+A+ + +++ A + I FL+ LR +GET EIVG AM V+ ++DIVGTGGDGA T NIST A+++ A G VAK D L LGV +++ PE + RC+ EAG+GFM + ++H AM+ V P R Sbjct: 13 AREALSRDDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLHVKAPDGSIDIVGTGGDGAGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGTADALSCLGVNLEIGPEAISRCIGEAGLGFMFAQQHHSAMRHVGPTR 167 The following BLAST results are available for this feature:
BLAST of FC875438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875438 ID=FC875438; Name=FC875438; organism=Citrus clementina; type=EST; length=721bpback to top |