FC875438

Overview
NameFC875438
Unique NameFC875438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_TOLAT (Anthranilate phosphoribosyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 63/154 (40.91%), Postives = 87/154 (56.49%), Query Frame = 3
Query:  246 TEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704
            +E   Q   + L  E D  ++S+ L  ++ KGE+  EI G ARA+I  A        +  DIVGTGGDG  T+NIS+ A+I+ A CG KVAK             D+LE LG+ +D+ PE  R C+DEA I F+ +  YH  M+F  PVR++ K
Sbjct:   16 SEQTEQLFGELLRGEMDPIVLSSLLTAMKVKGESPSEIEGAARALIAAAKPFPRPDYEFCDIVGTGGDGLYTINISSTAAIVGATCGIKVAKHGNRSVSSKTGSSDLLEKLGIKLDMSPETARHCLDEANICFLFAPHYHSGMRFAAPVRQALK 169          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PSYWF (Anthranilate phosphoribosyltransferase OS=Psychrobacter sp. (strain PRwf-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 60/163 (36.81%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704
            ++ R+DLT+ E +  +  +++    +A++ A L  L  K E+  EI   A  M+ +A K+E     + VDIVGTGGDG+N  N+ST ++ +AAA GA VAK             D+LE  G+ +++ PE  R C++  GIGF+ +  +H AMK   PVR++ K
Sbjct:   27 ILRRIDLTQQEMRQIMTIIMDGRCPDAMLGALLTGLNMKSESIDEITASASVMLDFAKKIEPKNRTNMVDIVGTGGDGSNLFNVSTASAFVAAAAGATVAKHGNRGVSSKSGSSDLLEQAGLNLNITPEQTRECIETQGIGFLFAPNHHTAMKHAIPVRRALK 189          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PSEMY (Anthranilate phosphoribosyltransferase OS=Pseudomonas mendocina (strain ymp) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 67/159 (42.14%), Postives = 92/159 (57.86%), Query Frame = 3
Query:  210 ELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 674
            E ++ +++++DLT  E QA + + +  +  +A I AFL+ +R K ET  EIVG A  M + A  V  + DA   VD  GTGGDG N  N+ST A+ + AA G KVAK             D+LEA GV + L PE V RCV+  G+GFM +  +H AMK
Sbjct:    5 EALNRIVAQLDLTTEEMQAVMREIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAASVMRELAAPV--VIDAERLVDTCGTGGDGMNIFNVSTAAAFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVYLGLKPEQVARCVESVGVGFMFAPSHHGAMK 161          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_MOOTA (Anthranilate phosphoribosyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = 3
Query:  216 IDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            I  +++   L+EAEA  ++D ++  EA  A I+AFL  LR KGE   EI G AR+M + A  +       VD  GTGGDG  T NIST A+ + A  G  VAK             D+LEALG+ +DL P+ V RC+DE G+ F+ +  +H AMK+    R+
Sbjct:    6 ISKVVAGQHLSEAEAAEAMDIIMAGEATPAQIAAFLTALRLKGEMVDEITGFARSMRRRAIPLTTSHPVFVDTCGTGGDGRQTFNISTTAAFVVAGAGVAVAKHGNRSVSSRCGSADMLEALGIKVDLPPDAVARCLDEVGMAFLFAPVFHGAMKYAAGPRR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_METPP (Anthranilate phosphoribosyltransferase OS=Methylibium petroleiphilum (strain PM1) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 67/139 (48.20%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  288 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E    +I+A  V LR K E+ GEI   A  M ++AT V  + D    VD+ GTGGD A+T NIST A  +AAA GA+VAK             DVLEALG  IDL P  V  C+ E+GIGFM +  +HPAMK   PVRK
Sbjct:   33 EMSPVMIAALAVGLRVKKESIGEIAAAATVMREFATPVP-VADTEHLVDLCGTGGDAAHTFNISTTAMFVAAAAGARVAKHGGRSVSSTSGSADVLEALGASIDLAPAQVAECLAESGIGFMFAPNHHPAMKHAGPVRK 170          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_METM7 (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 66/164 (40.24%), Postives = 95/164 (57.93%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704
            +++ LI R +L+  E+    + LLNE+ E  I+A+LV L+ KG T  EI G A+AM   A K++ LG+  D  GTGGDG+ T+N+ST  SI+ + C  KVAK             +V EALG  I   PE  ++ +D+    F+ + KYHPA+K + PVR   K
Sbjct:    1 MLNKLIERENLSFEESYELFNMLLNES-EMRIAAYLVALQTKGVTADEIAGFAKAMRDNAVKID-LGEVTDTCGTGGDGSKTINVSTAVSIILS-CFTKVAKHGNVSITSKSGSANVYEALGCKIPETPEDAKKSMDKTNFAFLFAPKYHPALKKIMPVRNELK 161          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_METM5 (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704
            +++ LI R +L+  E+    + LLNE+ E  I+A+LV L+ KG T  EI G A+AM   A K++ LG+  D  GTGGDG+ T+N+ST  SI+ A C  KVAK             +V EALG  I   PE  ++ +D+    F+ + KYHPA+K + PVR   K
Sbjct:    1 MLNKLIERENLSFKESYELFNMLLNES-EMRIAAYLVALQTKGVTADEIAGFAKAMRDNAVKID-LGEVTDTCGTGGDGSKTINVSTAVSIILA-CFTKVAKHGNVSITSNSGSANVYEALGCKIPETPEDAKKSMDKTNFVFLFAQKYHPALKKIMPVRNELK 161          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_CLOPH (Anthranilate phosphoribosyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 68/163 (41.72%), Postives = 92/163 (56.44%), Query Frame = 3
Query:  210 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E I  L+++ DL+   A+  +D +++ EA   LI ++L  LR KGET  EI   A  M K+  ++    D ++IVGTGGD ANT NIST    + +A G  VAK             DVLEALGV I L P    + ++E G+ FM +  YH AMKFV PVR+
Sbjct:    4 EAIYQLVNKEDLSYEVAEQVMDEIMSGEASNVLIGSYLTALRMKGETIDEITASAAGMRKHCVRLLHNMDVLEIVGTGGDEANTFNISTTTGFVVSAAGIPVAKHGNRCVSSKCGAADVLEALGVNIMLAPLESAKILEEMGLCFMFAQTYHSAMKFVAPVRR 166          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BURP8 (Anthranilate phosphoribosyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 63/133 (47.37%), Postives = 81/133 (60.90%), Query Frame = 3
Query:  303 LISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            + +A +  LR K ET GEI   A  M ++A  V+   ++  VDIVGTGGDG++T NIST    ++AA GAKVAK             DVLEALGV IDL PE V   + E G+GFM +  +HPAMK + PVR+
Sbjct:   38 MAAAIITGLRVKKETIGEITAAATVMREFARHVDVQDNSNFVDIVGTGGDGSHTFNISTATMFVSAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASITETGMGFMFAPNHHPAMKNIAPVRR 170          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PSESM (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24
Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            +++++DL+  E +  + + +  +  EA I AFL+ +R K ET  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + +A G  VAK             D+LEA GV ++L P  V RC+D  GIGFM +  +H AMK     R+
Sbjct:   10 VVNQLDLSTDEMRDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELADKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVISAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFMFAQSHHSAMKHTAGPRR 169          
The following BLAST results are available for this feature:
BLAST of FC875438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_TOLAT1.818e-2440.91Anthranilate phosphoribosyltransferase OS=Tolumona... [more]
TRPD_PSYWF1.818e-2436.81Anthranilate phosphoribosyltransferase OS=Psychrob... [more]
TRPD_PSEMY1.818e-2442.14Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_MOOTA1.818e-2440.74Anthranilate phosphoribosyltransferase OS=Moorella... [more]
TRPD_METPP1.818e-2448.20Anthranilate phosphoribosyltransferase OS=Methylib... [more]
TRPD_METM71.818e-2440.24Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_METM51.818e-2440.85Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_CLOPH1.818e-2441.72Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_BURP81.818e-2447.37Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_PSESM2.375e-2440.63Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

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Properties
Property NameValue
Genbank descriptionC31403H10EF CTVClemen1 Citrus clementina cDNA clone C31403H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875438 ID=FC875438; Name=FC875438; organism=Citrus clementina; type=EST; length=721bp
GGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCCATTT
AATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAAACTG
TGGATTTACGACTGCGGGTACTAATCCGAGATGCAGAGAATTAACTGCTA
TTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAACGCCC
TGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGA
GGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGG
CCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTT
GGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGT
GGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTG
CAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGT
GGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGG
AAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAG
AGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCG
ACNAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAGCTC
AAAGTAAAACTGTATTCATAT
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