FC875438

Overview
NameFC875438
Unique NameFC875438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BACP2 (Anthranilate phosphoribosyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 67/164 (40.85%), Postives = 91/164 (55.49%), Query Frame = 3
Query:  207 NELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            N+ +  L++   L+E EA Q   D +     +A ++A L +L  +GET  E+ G  RAM + A   E   D VD  GTGGDG +T NIST A+I+A+A GAK+AK             DVLE LG+ I   PE  RR + E  +GF+ +  YH +MK V  VRK
Sbjct:    2 NQRLSALVNGGFLSENEAHQLMHDMMSGSLTDAEVAASLSILAHRGETAEEMTGFVRAMRQKAEPAERSLDVVDTCGTGGDGLSTFNISTAAAIVASAAGAKIAKHGNRSVSSKSGSADVLECLGIHIQSTPEETRRQIQEKNMGFLFAPMYHSSMKQVAAVRK 165          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BACCA (Anthranilate phosphoribosyltransferase (Fragment) OS=Bacillus caldotenax GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 60/152 (39.47%), Postives = 88/152 (57.89%), Query Frame = 3
Query:  243 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            LTE EA A+++ +++ EA ++ I++ L +LR +GET  E+VG  RAM    T +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++  G+ F+ +  YH AMK     RK
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIHTSPSAAKQALETKGLAFLFAPLYHAAMKHAAGPRK 166          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_ANADE (Anthranilate phosphoribosyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 69/159 (43.40%), Postives = 86/159 (54.09%), Query Frame = 3
Query:  225 LISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            L+   DL+ AEA Q   +     A  A   AFL  LR KGET  EI G A  M + A +V    D  +D  GTGGDG +T NIST A+ +AA  G  VAK             DVL ALGV +D D E V RC++E GIGF+ + + HPA K +  VR+
Sbjct:    9 LLEGEDLSRAEAAQVMTEIADGGATPAQSGAFLAALRMKGETVEEIAGAADVMRQRADRVRVSRDVFIDTCGTGGDGRHTFNISTTAAFVAAGAGVCVAKHGNRAVSSRSGSADVLAALGVNVDADKETVERCIEEVGIGFLFAVRLHPAFKAIAGVRR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_MYCSJ (Anthranilate phosphoribosyltransferase OS=Mycobacterium sp. (strain JLS) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24
Identity = 68/171 (39.77%), Postives = 97/171 (56.73%), Query Frame = 3
Query:  195 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            TP +  ++  L +  +L   +A  ++D ++   A  A I+ F V ++ K  T  E+  LA  M+K+A ++  + +G + VDIVGTGGDGANTVN+ST A+I+ AA G  V K             D LEALGV IDL PE V   V E GIGF  + ++HP+ K    VR+
Sbjct:   11 TPTWPSILGRLTTGQNLGTGQAAWAMDQIMTGTATPAQIAGFAVAMKLKRPTSAEVTELADVMLKHARRIPTDVIGNETVDIVGTGGDGANTVNLSTMAAIVVAAAGVPVMKHGNRAASSLSGGADTLEALGVRIDLGPEQVAASVAEVGIGFAFANQFHPSYKHASAVRR 181          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPH (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24
Identity = 59/162 (36.42%), Postives = 89/162 (54.94%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            L + L+SR DL+  + Q  +   +  E  +  I+ FL L+R KGET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S + AA G KVAK             D+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R+
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKGETVNELTAAAQVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGNRSVSSRSGSADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQ 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPA (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Paris) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24
Identity = 59/162 (36.42%), Postives = 89/162 (54.94%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            L + L+SR DL+  + Q  +   +  E  +  I+ FL L+R KGET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S + AA G KVAK             D+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R+
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKGETVNELTAAAQVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGNRSVSSRSGSADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQ 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24
Identity = 66/173 (38.15%), Postives = 91/173 (52.60%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            ++ R DLTE+E    +D +++ EA  A I+AF+  LR KGET  EI G AR M    T++                 L   +D  GTGG   NT N+ST  + + +ACG KVAK             DVLE+LGV +D+  E + RC++E GIGF+ +   H AMK+    RK
Sbjct:    9 VVEREDLTESEMIQVMDQVMSGEATPAQIAAFITALRMKGETVAEITGAARVMRDKVTRIRVGKNILDMDRDDINVDLETILDTCGTGGSCTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSACGSADVLESLGVNLDVTQETIERCINEIGIGFLFAPALHGAMKYAIGPRK 181          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_SULSO (Anthranilate phosphoribosyltransferase OS=Sulfolobus solfataricus GN=trpD PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24
Identity = 70/165 (42.42%), Postives = 96/165 (58.18%), Query Frame = 3
Query:  207 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKS 698
            NE++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A K++ + +A+D  GTGGDG  TVN+ST ++IL +     VAK             DVLEALG  I + PE  +  V++    F+ +  YHPAMK V  VRK+
Sbjct:    4 NEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLVNP-VAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKT 166          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_MYCSS (Anthranilate phosphoribosyltransferase OS=Mycobacterium sp. (strain MCS) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24
Identity = 68/171 (39.77%), Postives = 97/171 (56.73%), Query Frame = 3
Query:  195 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            TP +  ++  L +  +L   +A  ++D ++   A  A I+ F V ++ K  T  E+  LA  M+K+A ++  + +G + VDIVGTGGDGANTVN+ST A+I+ AA G  V K             D LEALGV IDL PE V   V E GIGF  + ++HP+ K    VR+
Sbjct:   11 TPTWPSILGRLTTGQNLGTGQAAWAMDQIMTGTATPAQIAGFAVAMKLKRPTSAEVTELADVMLKHARRIPTDIIGNETVDIVGTGGDGANTVNLSTMAAIVVAAAGVPVMKHGNRAASSLSGGADTLEALGVRIDLGPEQVAASVAEVGIGFAFANQFHPSYKHASAVRR 181          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_MYCSK (Anthranilate phosphoribosyltransferase OS=Mycobacterium sp. (strain KMS) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24
Identity = 68/171 (39.77%), Postives = 97/171 (56.73%), Query Frame = 3
Query:  195 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            TP +  ++  L +  +L   +A  ++D ++   A  A I+ F V ++ K  T  E+  LA  M+K+A ++  + +G + VDIVGTGGDGANTVN+ST A+I+ AA G  V K             D LEALGV IDL PE V   V E GIGF  + ++HP+ K    VR+
Sbjct:   11 TPTWPSILGRLTTGQNLGTGQAAWAMDQIMTGTATPAQIAGFAVAMKLKRPTSAEVTELADVMLKHARRIPTDIIGNETVDIVGTGGDGANTVNLSTMAAIVVAAAGVPVMKHGNRAASSLSGGADTLEALGVRIDLGPEQVAASVAEVGIGFAFANQFHPSYKHASAVRR 181          
The following BLAST results are available for this feature:
BLAST of FC875438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BACP25.291e-2440.85Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACCA5.291e-2439.47Anthranilate phosphoribosyltransferase (Fragment) ... [more]
TRPD_ANADE5.291e-2443.40Anthranilate phosphoribosyltransferase OS=Anaeromy... [more]
TRPD_MYCSJ6.910e-2439.77Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_LEGPH6.910e-2436.42Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LEGPA6.910e-2436.42Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_GEOUR6.910e-2438.15Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_SULSO9.025e-2442.42Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_MYCSS9.025e-2439.77Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_MYCSK9.025e-2439.77Anthranilate phosphoribosyltransferase OS=Mycobact... [more]

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Properties
Property NameValue
Genbank descriptionC31403H10EF CTVClemen1 Citrus clementina cDNA clone C31403H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875438 ID=FC875438; Name=FC875438; organism=Citrus clementina; type=EST; length=721bp
GGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCCATTT
AATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAAACTG
TGGATTTACGACTGCGGGTACTAATCCGAGATGCAGAGAATTAACTGCTA
TTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAACGCCC
TGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGA
GGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGG
CCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTT
GGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGT
GGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTG
CAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGT
GGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGG
AAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAG
AGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCG
ACNAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAGCTC
AAAGTAAAACTGTATTCATAT
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