FC875438

Overview
NameFC875438
Unique NameFC875438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PARDP (Anthranilate phosphoribosyltransferase OS=Paracoccus denitrificans (strain Pd 1222) GN=trpD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 56/151 (37.09%), Postives = 75/151 (49.67%), Query Frame = 3
Query:  243 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            LT  EA+A+   L    A  A I   L+ +R +GET  E+    RAM     +++    A+DIVGTGGDG  T+NIST  + + A  G  VAK             D L  LG+ +   PE     +   GI FMM+  +HPAM+ V P R
Sbjct:   19 LTGTEAEAAFGALFEGAATPAQIGGLLMAMRVRGETVEEMAAATRAMRARMNRIKAPEGAMDIVGTGGDGKGTLNISTATAFVVAGAGVPVAKHGNRNLSSKSGSADALTHLGLNVMSTPEIAEAALAATGICFMMAPVHHPAMRHVGPAR 169          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_DESDG (Anthranilate phosphoribosyltransferase OS=Desulfovibrio desulfuricans (strain G20) GN=trpD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 58/164 (35.37%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  210 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E+++ L S   L    A  + D L++ E   A   +FL+ LR+ GET   +    RA + +A  ++GL  D +DIVGTGGDG N+ N ST A++  A  G KV K             DV+E LG+ ++  PE V   +      F+ +  YHPA + V PVR+
Sbjct:    5 EILETLASGGVLPPETAHMAFDRLMSGEMTPAQAGSFLMGLRSHGETPELVASAVRAALAHARLIQGLEYDRIDIVGTGGDGRNSFNCSTAAALTLAGMGYKVVKHGNRAVSSTSGSADVVEGLGLPLETAPEDVPVLLARHNFVFLFAPFYHPAFRHVMPVRR 168          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PASMU (Anthranilate phosphoribosyltransferase OS=Pasteurella multocida GN=trpD PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18
Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  288 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704
            + D + +SA L+ L+ +GET  EI G   A+   A     + D    DIVGTGGDGANT+NIST ++I+AA+ G KVAK             D+L ALGV + +     R+ +DE G+ F+ + +YH   +   PVR++ K
Sbjct:   32 QLDNSQLSAALIALKLRGETPEEISGAVTALQADAESFP-IPDYPFADIVGTGGDGANTINISTASAIVAASYGLKVAKHGNRSVSSQTGASDLLTALGVNVHISAHKARQALDEIGLCFLFAPQYHLGFQHAIPVRQALK 171          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_FRATO (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=trpD PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18
Identity = 54/162 (33.33%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            ++D L +  DL+  E+    DY +  + +  L ++ L+ L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    + ++  R
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILIALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLGFLFAPFYSDGFRHIKEAR 168          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_FRATF (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=trpD PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 54/162 (33.33%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            ++D L +  DL+  E+    DY +  + +  L ++ L+ L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    + ++  R
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILIALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNMGFLFAPFYSDGFRHIKEAR 168          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_CLAMS (Anthranilate phosphoribosyltransferase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 61/171 (35.67%), Postives = 88/171 (51.46%), Query Frame = 3
Query:  189 PLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTV-NISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            P  P +  LI  LI    L+ +E+  ++  ++  EA  A +   LV LRA GET  EIVG   A+++ A  ++    A+DIVGTGGD    V NIS+ ASI+AA+ G  V K             DVL ALG+ + + PE V   + E GI +  +  +HP  +     R+
Sbjct:    2 PSAPTWPALITTLIEGRHLSVSESTWAMRQVMRGEATPAQLGGLLVALRASGETVDEIVGFRDAVLEDALPLDADPRALDIVGTGGDPYGAVLNISSAASIVAASTGVPVIKHGNRGASSASGASDVLTALGIDLTIAPERVAAVLRETGITYAHAALFHPGFRHAAATRR 172          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_SODGM (Anthranilate phosphoribosyltransferase OS=Sodalis glossinidius (strain morsitans) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18
Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = 3
Query:  306 ISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704
            ++A L+ ++ +GE   EI G A A++  A+          DIVGTGGDG+N++NIST ++I+AA CGA+VAK             D+L A G+ +D+     R+ +DE GI F+ + +YH       PVR+  K
Sbjct:   36 LAAALISMKVRGEYSEEIAGAASALLADASPFPRPDYTFADIVGTGGDGSNSINISTASAIVAAGCGARVAKHGNRSVSSCSGSSDLLAAFGIRLDMPAALSRQALDELGICFLFAPQYHSGFSHAMPVRQLLK 169          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_METHJ (Anthranilate phosphoribosyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18
Identity = 59/160 (36.88%), Postives = 80/160 (50.00%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAT--KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            ++S  DL   EA+  +  + + +  +A I + L  L  KG T  EI   A  +   A   K +  G  VD  GTGGDGA+T NIST A+++AAA G +V K             DVLEALG+ I L PE     V    I F+ +  YHPA+  V   R+
Sbjct:    9 VVSMQDLAPDEARDLMTSIADGKVTDAQIGSILTALSMKGVTAHEITAFAHVLRDRAVQLKTDTSGTFVDTCGTGGDGAHTFNISTAAALVAAAAGVRVVKHGNRGVSSRSGSADVLEALGIPITLTPEEAAASVSSHNIAFLFAPGYHPAIGRVASARR 168          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_CALMQ (Anthranilate phosphoribosyltransferase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18
Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            L++ +   ++L+  EA  A+L  L  EA EA  +A L+ LR +GE   E+ G A+A+ +   ++  + D   +D  GTGGDG  T+N+ST +++LAA  G KV K             D LEALG  I + PE     ++     F  +  YHPAMK V PVR+
Sbjct:    4 LLEKIARGLELSLEEAYNAALAILKMEAGEAETAALLMGLRVRGERAFEVAGFAKALRETCLRIP-VNDPYVIDTAGTGGDGLRTMNVSTISALLAAYLGVKVLKHGNRSVSSSSGSADFLEALGFNISVKPETALLMLNNHRFSFAFAPMYHPAMKNVMPVRR 166          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_THEEB (Anthranilate phosphoribosyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 62/171 (36.26%), Postives = 90/171 (52.63%), Query Frame = 3
Query:  204 FNELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGV-VIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKSSK 704
            +++L+  L+ R  LT+ +A Q    +L  E  +AL  A L  L+ KG T  E+ G+A  ++  +      L +  +D  GTGGD A T NIST  + + AA G KVAK             DVLE LGV +   DP  +   + E GI F+ +  +HPAMK V P+R++ K
Sbjct:    2 WSDLLQQLLDRQALTQEQAAQLMQGWLAEEIPDALSGAILTALQLKGLTVEELTGMANVLLAQSAGAPLNLAEPLIDTCGTGGDRAGTFNISTAVAFVVAAAGVKVAKHGNRSVSSRVGSADVLETLGVNLAHSDPAFL---LKEVGITFLFAPGWHPAMKAVAPLRRTLK 169          
The following BLAST results are available for this feature:
BLAST of FC875438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PARDP4.338e-1837.09Anthranilate phosphoribosyltransferase OS=Paracocc... [more]
TRPD_DESDG4.338e-1835.37Anthranilate phosphoribosyltransferase OS=Desulfov... [more]
TRPD_PASMU5.666e-1839.01Anthranilate phosphoribosyltransferase OS=Pasteure... [more]
TRPD_FRATO5.666e-1833.33Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_FRATF7.400e-1833.33Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_CLAMS7.400e-1835.67Anthranilate phosphoribosyltransferase OS=Clavibac... [more]
TRPD_SODGM9.665e-1837.31Anthranilate phosphoribosyltransferase OS=Sodalis ... [more]
TRPD_METHJ9.665e-1836.88Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_CALMQ9.665e-1836.59Anthranilate phosphoribosyltransferase OS=Caldivir... [more]
TRPD_THEEB1.262e-1736.26Anthranilate phosphoribosyltransferase OS=Thermosy... [more]

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Properties
Property NameValue
Genbank descriptionC31403H10EF CTVClemen1 Citrus clementina cDNA clone C31403H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875438 ID=FC875438; Name=FC875438; organism=Citrus clementina; type=EST; length=721bp
GGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCCATTT
AATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAAACTG
TGGATTTACGACTGCGGGTACTAATCCGAGATGCAGAGAATTAACTGCTA
TTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAACGCCC
TGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGA
GGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGG
CCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTT
GGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGT
GGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTG
CAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGT
GGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGG
AAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAG
AGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCG
ACNAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAGCTC
AAAGTAAAACTGTATTCATAT
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