FC875438

Overview
NameFC875438
Unique NameFC875438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:11..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_STRZP (Anthranilate phosphoribosyltransferase OS=Streptococcus pneumoniae (strain P1031) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  210 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            E+I+ L    +L+  E    ++ ++     EA I++ L+ L+ KGET  E   +AR M  +A  +   + DA+D  GTGGD + + NIST A+ + A  G  +AK             DVLEALG+ +DL P  + +  D+ GI F+ +   HPAMK++ P R
Sbjct:    3 EIIEKLAKFENLSGVEMTDVIERIVTGRVTEAQIASLLLALKMKGETPEERTAIARVMRGHAQHIPTEIHDAMDNCGTGGDKSFSFNISTTAAFVLAGGGIHMAKHGNRSISSKSGSADVLEALGINLDLKPAELGKVFDKTGIVFLFAKNMHPAMKYIMPAR 165          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_STRP4 (Anthranilate phosphoribosyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  210 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            E+I+ L    +L+  E    ++ ++     EA I++ L+ L+ KGET  E   +AR M  +A  +   + DA+D  GTGGD + + NIST A+ + A  G  +AK             DVLEALG+ +DL P  + +  D+ GI F+ +   HPAMK++ P R
Sbjct:    3 EIIEKLAKFENLSGVEMTDVIERIVTGRVTEAQIASLLLALKMKGETPEERTAIARVMRGHAQHIPTEIHDAMDNCGTGGDKSFSFNISTTAAFVLAGGGIHMAKHGNRSISSKSGSADVLEALGINLDLKPAELGKVFDKTGIVFLFAKNMHPAMKYIMPAR 165          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_DICT6 (Anthranilate phosphoribosyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 52/136 (38.24%), Postives = 71/136 (52.21%), Query Frame = 3
Query:  288 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E  EA + A L+ LR KGE   EI G    + + A K+     AVD+ GTGGD +NT NIST  +   A+ G +VAK             DV+EALG     +PE + R +DE GIG + +  +HP +     VR+
Sbjct:   31 EITEAQLGAVLLGLRLKGENPEEIAGFVDVLHEKAKKIPNRTPAVDVCGTGGDKSNTFNISTAVAFTLASLGVRVAKHGNRAMSSKAGSIDVIEALGFKCSDNPEEIARDIDEKGIGIIFAPYFHPVVGKAVKVRR 166          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BUCBP (Anthranilate phosphoribosyltransferase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trpD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17
Identity = 48/140 (34.29%), Postives = 81/140 (57.86%), Query Frame = 3
Query:  279 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYA-TKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            +L + +   +SA L+ L+ +GE+  EI+G  +A +++  T  +      DIVGTGGD +N++NIST ++++ +ACG K+AK             D+L+  G+ I + PE  ++ +DE  I F+ + +YH   K V  VRK
Sbjct:   27 MLKKINNIELSAILIALKIRGESQNEILGAVKACLEHMITFPKPTYMFSDIVGTGGDNSNSINISTTSALVGSACGFKIAKHCNGNISSKTGSADILKKFGINIQISPEKSKKMLDELNICFLFAPQYHINFKVVTQVRK 166          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_AQUAE (Anthranilate phosphoribosyltransferase OS=Aquifex aeolicus GN=trpD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17
Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 3
Query:  291 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            A +A I A ++  + KGET  EI G  +   +   +V  +   + VD+VGTGGD ++T N+ST    + A  G KVAK             D LEALG  ++L PE V R ++E G GFM +  +HPAMK V   R+
Sbjct:   34 ATDAQIGALVMGTKMKGETPEEIEGAVKLFREKVVRVPVKDPEELVDVVGTGGDKSSTFNVSTVTGFVLAGAGVKVAKHGNRSVSSKSGSADFLEALGAKVELLPEKVARLIEEVGFGFMFAPLFHPAMKRVVSPRR 170          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_LEPBL (Anthranilate phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            LI    ++  EA+  ++ ++  E  E L+S+F+  +RAKGE+  E++G   A+ K A K + +   D +D  GTGGDG  T+N+ST ++I  A+ G KVAK             D+L  LG   +   E V   +   G  F+ +  +HP+MK+   VRK
Sbjct:   10 LIEHKHISVEEAEFFMNRVMKGEVSEILLSSFVTAMRAKGESVDEVLGCTLALRKNALKPKTVFPFDLLDTCGTGGDGQGTINVSTLSAITLASLGVKVAKHGNRSVSSHTGSSDILARLGYQTEATQEEVEAHLISRGFTFLFAPMWHPSMKYAGSVRK 169          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_LEPBJ (Anthranilate phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            LI    ++  EA+  ++ ++  E  E L+S+F+  +RAKGE+  E++G   A+ K A K + +   D +D  GTGGDG  T+N+ST ++I  A+ G KVAK             D+L  LG   +   E V   +   G  F+ +  +HP+MK+   VRK
Sbjct:   10 LIEHKHISVEEAEFFMNRVMKGEVSEILLSSFVTAMRAKGESVDEVLGCTLALRKNALKPKTVFPFDLLDTCGTGGDGQGTINVSTLSAITLASLGVKVAKHGNRSVSSHTGSSDILARLGYQTEATQEEVEAHLISRGFTFLFAPMWHPSMKYAGSVRK 169          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_FRATW (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=trpD PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17
Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            ++D L +  DL+  E+    DY +  + +  L ++ L  L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+    Y    + ++  R
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILTALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLGFLFVPFYSDGFRHIKEAR 168          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_DICTD (Anthranilate phosphoribosyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17
Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 3
Query:  288 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E  EA + A L+ LR KGE   EI G    + + A KV     A+D+ GTGGD +NT NIST  +   A+ G KVAK             DV+EALG     +PE + + +D+ GIG + +  +HP +     VR+
Sbjct:   31 EITEAQLGAILLGLRLKGENPEEIAGFVDVLHEKAKKVPNKTPAIDVCGTGGDKSNTFNISTAVAFTLASLGIKVAKHGNRAMSSKAGSIDVIEALGFKCSDNPEEIAKDIDDKGIGIIFAPYFHPVVGKAVKVRR 166          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_CHLL2 (Anthranilate phosphoribosyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17
Identity = 56/158 (35.44%), Postives = 79/158 (50.00%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            L+S    ++ E    ++ ++N    + +I+A L LL  KG T  E+ G   ++I  A  ++   DAVD  GTGGD A T NIST  SI+A + G  +AK             DVLE LG  IDL  E         G  F+ +  +HP+MK V  +RK
Sbjct:   10 LLSGDHFSQEEMTQCMNAIMNGVFPDTVIAALLALLEHKGVTSTEVAGAYYSLIAKANTIDLSPDAVDTCGTGGDHAGTYNISTIGSIIANSTGVSIAKHGNRSVTSSCGSADVLEELGFRIDLPVEATVELYARTGFSFLFAPLFHPSMKRVAHIRK 167          
The following BLAST results are available for this feature:
BLAST of FC875438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_STRZP1.262e-1734.97Anthranilate phosphoribosyltransferase OS=Streptoc... [more]
TRPD_STRP41.262e-1734.97Anthranilate phosphoribosyltransferase OS=Streptoc... [more]
TRPD_DICT61.262e-1738.24Anthranilate phosphoribosyltransferase OS=Dictyogl... [more]
TRPD_BUCBP1.649e-1734.29Anthranilate phosphoribosyltransferase OS=Buchnera... [more]
TRPD_AQUAE2.153e-1738.69Anthranilate phosphoribosyltransferase OS=Aquifex ... [more]
TRPD_LEPBL2.812e-1733.75Anthranilate phosphoribosyltransferase OS=Leptospi... [more]
TRPD_LEPBJ2.812e-1733.75Anthranilate phosphoribosyltransferase OS=Leptospi... [more]
TRPD_FRATW2.812e-1733.33Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_DICTD2.812e-1737.50Anthranilate phosphoribosyltransferase OS=Dictyogl... [more]
TRPD_CHLL22.812e-1735.44Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]

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Properties
Property NameValue
Genbank descriptionC31403H10EF CTVClemen1 Citrus clementina cDNA clone C31403H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875438 ID=FC875438; Name=FC875438; organism=Citrus clementina; type=EST; length=721bp
GGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCCATTT
AATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAAACTG
TGGATTTACGACTGCGGGTACTAATCCGAGATGCAGAGAATTAACTGCTA
TTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAACGCCC
TGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGA
GGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGG
CCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTT
GGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGT
GGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTG
CAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGT
GGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGG
AAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAG
AGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCG
ACNAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAGCTC
AAAGTAAAACTGTATTCATAT
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