FC875438

Overview
NameFC875438
Unique NameFC875438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:11..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK1 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=trpD PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27
Identity = 67/165 (40.61%), Postives = 99/165 (60.00%), Query Frame = 3
Query:  207 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+     A+D  GTGGDG  T NIST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D  G+GF+ +  YH AMK V  +R+
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAMKNVAGIRR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BRASO (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=trpD PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27
Identity = 68/151 (45.03%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  243 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            L+  +A ++ D +++ EA  + + A L+ LR +GET  EI G    M     +V+   +AVDIVGTGGDG+ +VN+ST AS + A  G  VAK             DVL ALGV IDL P+ V RC+ EAGIGFM +  +HPAMK V P R
Sbjct:   17 LSREQAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPANAVDIVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCIREAGIGFMFAPAHHPAMKNVGPTR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_BRASB (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=trpD PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27
Identity = 69/151 (45.70%), Postives = 89/151 (58.94%), Query Frame = 3
Query:  243 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            L+  EA ++ D +++ EA  + + A L+ LR +GET  EI G    M     +V+    AVDIVGTGGDG+ +VN+ST A+ + A  G  VAK             DVL ALGV IDL P+ V RCV EAGIGFM +  +HPAMK V P R
Sbjct:   17 LSREEAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPAGAVDIVGTGGDGSGSVNVSTCAAFIVAGAGIPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCVQEAGIGFMFAPAHHPAMKNVGPTR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_PARL1 (Anthranilate phosphoribosyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=trpD PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 70/164 (42.68%), Postives = 96/164 (58.54%), Query Frame = 3
Query:  204 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVR 692
            F  +I  L     L  AEA+A+ + +++ EA +A I AFL+ LR +GET  EI   A  M + A +V    +A+DIVGTGGDG  T NIST  +++ AA G  VAK             D L+ALGV +D+DP  +   +++AGIGFM +  +H AMK V PVR
Sbjct:    4 FKTIIARLAEGRALDAAEARAAFEIVMSGEATQAQIGAFLMGLRVRGETVAEITAGATVMRERALRVTAPANAIDIVGTGGDGVGTWNISTATALVVAAAGVPVAKHGNRKASSLSGTADALQALGVNLDIDPATIAASIEKAGIGFMFAQAHHAAMKHVAPVR 167          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_ACIAC (Anthranilate phosphoribosyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.677e-27
Identity = 69/139 (49.64%), Postives = 84/139 (60.43%), Query Frame = 3
Query:  288 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E    + +A +  LR K ET GEI   A+ M + + KV  + D    VDIVGTGGDGANT NIST A  +AAA GAK AK             DV+E+LGV IDL PE + RC+ + GIGFM +  +HPAMK V PVRK
Sbjct:   34 ELSPVMTAAIVTGLRVKKETIGEITAAAQVMRELSRKV-AVADTTHLVDIVGTGGDGANTFNISTCAMFVAAAAGAKTAKHGGRGVSSKSGSADVMESLGVHIDLPPEAIARCIADTGIGFMFAPNHHPAMKNVAPVRK 171          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_RHOFD (Anthranilate phosphoribosyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27
Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = 3
Query:  279 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            +  E    +++A +  LR K ET GEI   A+ M +++TKV        VDIVGTGGDG++T NIST A  +AAA GA+V+K             DV+E+LGV I+L PE + +C+++ G+GFM +  +HPAMK V PVRK
Sbjct:   35 MTGEWSPVMMAALITGLRVKKETIGEITAAAQVMREFSTKVNVADTSHLVDIVGTGGDGSHTFNISTCAMFVAAAAGARVSKHGGRSVSSKSGSADVMESLGVNINLSPEAIAQCIEQVGVGFMFAPNHHPAMKNVAPVRK 175          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_XANCP (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.139e-26
Identity = 69/138 (50.00%), Postives = 85/138 (61.59%), Query Frame = 3
Query:  288 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HPAMK V PVR+
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPVRR 171          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_XANCB (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.139e-26
Identity = 69/138 (50.00%), Postives = 85/138 (61.59%), Query Frame = 3
Query:  288 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HPAMK V PVR+
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRCHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPVRR 171          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_XANC8 (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.139e-26
Identity = 69/138 (50.00%), Postives = 85/138 (61.59%), Query Frame = 3
Query:  288 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HPAMK V PVR+
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPVRR 171          
BLAST of FC875438 vs. ExPASy Swiss-Prot
Match: TRPD_THEFY (Anthranilate phosphoribosyltransferase OS=Thermobifida fusca (strain YX) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.139e-26
Identity = 65/165 (39.39%), Postives = 99/165 (60.00%), Query Frame = 3
Query:  204 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRK 695
            ++ LI  L++   LT  + + +++ +++  A +A I+ F + LRAKGE+  E+ GLA+ M+ +A  +   G  +DIVGTGGD A+TVN+ST ASI+A+A GA+V K             DVLE LGV+IDLDP       +E  I F  +  YHP++K+    R+
Sbjct:    6 WSHLISALLNGTSLTADDTKWAMNEIMSGSATDAQIAGFAIALRAKGESVAEVRGLAQGMLDHAVTISVPGATLDIVGTGGDRAHTVNVSTMASIVASAAGARVVKHGNRAASSSCGTADVLERLGVIIDLDPADAVAVAEEVDITFCFAPLYHPSLKYAAKPRR 170          
The following BLAST results are available for this feature:
BLAST of FC875438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_CLOK13.915e-2740.61Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_BRASO3.915e-2745.03Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_BRASB3.915e-2745.70Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_PARL15.113e-2742.68Anthranilate phosphoribosyltransferase OS=Parvibac... [more]
TRPD_ACIAC6.677e-2749.64Anthranilate phosphoribosyltransferase OS=Acidovor... [more]
TRPD_RHOFD8.721e-2744.68Anthranilate phosphoribosyltransferase OS=Rhodofer... [more]
TRPD_XANCP1.139e-2650.00Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANCB1.139e-2650.00Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANC81.139e-2650.00Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_THEFY1.139e-2639.39Anthranilate phosphoribosyltransferase OS=Thermobi... [more]

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Properties
Property NameValue
Genbank descriptionC31403H10EF CTVClemen1 Citrus clementina cDNA clone C31403H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875438 ID=FC875438; Name=FC875438; organism=Citrus clementina; type=EST; length=721bp
GGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCCATTT
AATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAAACTG
TGGATTTACGACTGCGGGTACTAATCCGAGATGCAGAGAATTAACTGCTA
TTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAACGCCC
TGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGA
GGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGG
CCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTT
GGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGT
GGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTG
CAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGT
GGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGG
AAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAG
AGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCG
ACNAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAGCTC
AAAGTAAAACTGTATTCATAT
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