FC875440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.846e-71 Identity = 103/173 (59.54%), Postives = 126/173 (72.83%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQT HETTGGWP AP G YAWGYCF RE G+ DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFKSAIWFWMT Q PKPSCH+VI W+PS D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ Sbjct: 125 KREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDP----VISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFY 290 HSP 2 Score: 74.3294 bits (181), Expect = 2.846e-71 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 7 GECDPD-DGTAGDGGELGKIISREMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 G C G G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T RKREIAAF Sbjct: 56 GNCQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAF 131
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 2.381e-70 Identity = 95/174 (54.60%), Postives = 121/174 (69.54%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREV-GAASSDYC--DPNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQT HETTGGW AP G Y+WGYCF E G SDYC +PC KYYGRGPIQ+++NYNY G+ +G +LL+NPDL+A++ +SFK+A WFWMT Q PKPSCH V+ +W P+ ND AGR+PGYG+ TNIINGG+ECG+G + V +RIGF+ Sbjct: 131 KREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIG--SNLLSNPDLVASD----ATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFY 298 HSP 2 Score: 83.9593 bits (206), Expect = 2.381e-70 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 4 CGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 CG P + G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ RKRE+AAF Sbjct: 63 CGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAF 137
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 4.050e-70 Identity = 100/173 (57.80%), Postives = 123/173 (71.10%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQT HETTGGWP AP G Y+WGYCF E + YC+P +PC KYYGRGPIQ+T+NYNY G+ +G DLLNNPDL+A++ +SFK+A WFWMT Q PKPSCH VI +W PSA+D AGR+PGYG TNIINGG+ECG+G +D V +RIGF+ Sbjct: 128 KREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIG--SDLLNNPDLVASD----ATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFY 294 HSP 2 Score: 70.4774 bits (171), Expect = 4.050e-70 Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 19 PDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 P ++G G + IIS +F+ +L +RND+ C A+ FYTYDAF+ AA A+P F +G+ KRE+AAF Sbjct: 65 PTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAF 134
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 9.794e-69 Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F QT HETTGGWP AP G ++WGYCF +E S DYC P+ +PC KYYGRGPIQL++N+NY G +G DLL+NPDL+AT+ +SFK+A+WFWMT Q KPS H+VI W PS D AGR PGYG+ TNI+NGG+ECG+G +D V NRIGF+ Sbjct: 141 KREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPS-DYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIG--VDLLSNPDLVATD----ATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFY 306 HSP 2 Score: 82.0333 bits (201), Expect = 9.794e-69 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1 Query: 19 PDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 P + DG +G I+ R++FE LL +RND CPAR FYTY+AF+ AA AFPAFG +GN RKRE+AAF Sbjct: 80 PTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAF 147
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 9.799e-69 Identity = 102/172 (59.30%), Postives = 122/172 (70.93%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP-NYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K++L F AQT HETTGGWP AP G YAWGYCF E YC P ++PC KYYGRGPIQLT NYNY G+ + EDL+NNPDLL+TN +SFK+AIWFWMT Q KPS H+VI W PSA D +AGR+PGYG+ TNIINGGIECG+G ++ V +R+GF+ Sbjct: 132 KKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEV-YCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIK--EDLINNPDLLSTNP----TVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFY 296 HSP 2 Score: 75.8702 bits (185), Expect = 9.799e-69 Identity = 30/62 (48.39%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 43 GGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 GG++G+++ +F+ +L+YRND RC FYTYDAFI AA++F FG +G++ +K+E+AAF Sbjct: 77 GGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAF 138
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.210e-68 Identity = 103/173 (59.54%), Postives = 123/173 (71.10%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQT HETTGGW AP G +AWGYCF +E GA SSDYC P+ +PC +YYGRGPIQL+ NYNY G +G DLL NPDL+AT+ G FK+AIWFWMTAQPPKPS H VI +W PS D AGR+PG+G+ TNIINGGIECG+G + V +RIGF+ Sbjct: 77 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGA-SSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIG--VDLLANPDLVATDATVG----FKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFY 242 HSP 2 Score: 72.0182 bits (175), Expect = 8.210e-68 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 46 GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 G + I+SR F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ +KRE+AAF Sbjct: 23 GSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAF 83
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.069e-67 Identity = 100/173 (57.80%), Postives = 124/173 (71.68%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQT HETTGGW AP G +AWGYCF +E GA +S+YC P+ +PC GK YYGRGPIQL+ NYNY G +G DLL NPDL+AT+ +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR+PG+G+ TNI+NGGIECG+G + V +RIGF+ Sbjct: 132 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGA-TSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIG--VDLLRNPDLVATDP----TVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFY 297 HSP 2 Score: 76.6406 bits (187), Expect = 1.069e-67 Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 31 TAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 T GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKRE+AAF Sbjct: 73 TPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAF 138
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 2.370e-67 Identity = 98/174 (56.32%), Postives = 122/174 (70.11%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVG-AASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQT HETTGGW AP G YAWGYCF E G AA DYC + +PC KYYGRGPIQL++N+NY G+ +G DLL +PDL+A++ +SF +A WFWMT Q PKPSCH V +W PSA+D AGR+PGYG+ TNIINGG+ECG+G +D V +RIGF+ Sbjct: 134 KREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGA--DLLGDPDLVASD----ATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFY 301 HSP 2 Score: 73.559 bits (179), Expect = 2.370e-67 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 4 CGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAF 228 CG P + G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + KRE+AAF Sbjct: 65 CGGGGPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAF 140
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 201.83 bits (512), Expect = 4.031e-67 Identity = 100/173 (57.80%), Postives = 124/173 (71.68%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQT HETTGGW AP G +AWGYCF +E GA +S+YC P+ +PC GK YYGRGPIQL+ NYNY G +G DLL NPDL+AT+ +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR+PG+G+ TNI+NGGIECG+G + V +RIGF+ Sbjct: 129 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGA-TSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIG--VDLLRNPDLVATDP----TVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFY 294 HSP 2 Score: 74.7146 bits (182), Expect = 4.031e-67 Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 7 GECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 G P T GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AF FG +G RKRE+AAF Sbjct: 62 GGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAF 135
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.273e-65 Identity = 99/173 (57.23%), Postives = 121/173 (69.94%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K + F AQT HETTGGW AP G +AWGYCF +E GAA+ DYC P+ +PC +YYGRGPIQL+ NYNY G +G DLL NPDL+AT+ +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR PG+G+ TNIINGG+ECG+G + V +RIGF+ Sbjct: 77 KRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAA-DYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIG--VDLLRNPDLVATDP----TVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFY 242 HSP 2 Score: 70.4774 bits (171), Expect = 1.273e-65 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 46 GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 G + IIS F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKR++AAF Sbjct: 23 GSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 The following BLAST results are available for this feature:
BLAST of FC875440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875440 ID=FC875440; Name=FC875440; organism=Citrus clementina; type=EST; length=723bpback to top |