FC875440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 6.610e-55 Identity = 85/174 (48.85%), Postives = 114/174 (65.52%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQ HETTGGW AP G YAWG C+ E+ SS YCD +PC GK Y+GRGPIQ++WN+NY G+ LG D L NP+++A ++F++A+WFWMT + KPSCH+V++ E++P DV A R G+GL TNI+NGG+EC G+ V NRIGF+ Sbjct: 101 KREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSS-YCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGF--DGLRNPEIVANCSD----IAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFY 267 HSP 2 Score: 60.8474 bits (146), Expect = 6.610e-55 Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 1 Query: 28 GTAGDGG------ELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 G G GG + I+S +++ L +++D CPAR FYTY +F+ AA FP F +G RKRE+AAF Sbjct: 35 GGGGGGGYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAF 107
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 7.807e-53 Identity = 84/174 (48.28%), Postives = 106/174 (60.92%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP----NYPCRGKYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K +L FFAQT ET+G + WGYC E+ +SDYCDP +YPC YYGRGP+QL WNYNY CG LG ++LL+ P+ +AT+ VLSF++A+WFWM PSCHEVI EW PS D+ AGR PG+G+ TNII G EC G +NRI ++ Sbjct: 115 KRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNP-NSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLG--QNLLDEPEKVATDP----VLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYY 281 HSP 2 Score: 63.929 bits (154), Expect = 7.807e-53 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 1 Query: 67 SREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 + MFE +L RN+ CP + FYTYDA+ A + +P FG +G++ RKRE+AAFF Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFF 122
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 7.066e-51 Identity = 81/174 (46.55%), Postives = 113/174 (64.94%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQT H T+GG Y+WGYC+ +EV A+SD+C PN +PC GK Y+ RGP+Q+ +NYNY GE +G DLL NP+L+AT+ ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ Sbjct: 149 KREVAAFLAQTSHATSGG-------PYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGA--DLLGNPELVATDP----TVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFY 306 HSP 2 Score: 69.707 bits (169), Expect = 7.066e-51 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 31 TAGDGGELG--KIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 TA GG G +++ + FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF Sbjct: 88 TAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 7.066e-51 Identity = 81/174 (46.55%), Postives = 113/174 (64.94%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ F AQT H T+GG Y+WGYC+ +EV A+SD+C PN +PC GK Y+ RGP+Q+ +NYNY GE +G DLL NP+L+AT+ ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ Sbjct: 149 KREVAAFLAQTSHATSGG-------PYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGA--DLLGNPELVATDP----TVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFY 306 HSP 2 Score: 69.707 bits (169), Expect = 7.066e-51 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 31 TAGDGGELG--KIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 TA GG G +++ + FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF Sbjct: 88 TAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.065e-40 Identity = 84/184 (45.65%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 164 KLFQPLVTLEMKPCVKEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K F T K ++ F AQT HETTGGWP AP G Y E+G+ S Y+GRGPIQ+++NYNY G+ +G DLL NPDL+ +++ + FK+A+WFWMT Q PKPS H+VI W PS+ D AGR+PGYG+ TNII+GG+ECG G V +RIG++ Sbjct: 30 KSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSD------------YFGRGPIQISYNYNYGAAGKAIG--VDLLRNPDLVTSDN----TVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYY 187
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.732e-32 Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC-DPNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGND-AVR-NRIGFF 715 K ++ F A T+G D +AWG C +D+C ++PC KY RGPIQLT N+NY G+ +G EDL+ NPDL+ ++ ++SFK+A+WFWM+ KPSCH++++ +AN A R+P G+ NII+ +G +D AVR + IGF+ Sbjct: 180 KREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIG--EDLIQNPDLV----EKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISR----AFGHDDFAVRSSSIGFY 336 HSP 2 Score: 57.7658 bits (138), Expect = 1.732e-32 Identity = 24/56 (42.86%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 61 IISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 228 +++ +F+ + +R D CP++ FY+Y +F+ AA++FPAFG G+ RKRE+AAF Sbjct: 133 VVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAF 186
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.724e-28 Identity = 62/176 (35.23%), Postives = 81/176 (46.02%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREV-GAASSDYCDPN----YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ FFA HETT C E G YCD + YPC KYYGRGP+QL+WNYNY G+ + G D L NP+ +AT+ SFK+A+WFWMT +V++ G+G TT ING +EC D +RI F+ Sbjct: 136 KREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAI--GFDGLGNPEKVATDVN----TSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFY 271 HSP 2 Score: 51.6026 bits (122), Expect = 8.724e-28 Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 1 Query: 28 GTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 GT G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ KREIAAFF Sbjct: 79 GTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFF 143
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.379e-27 Identity = 54/174 (31.03%), Postives = 83/174 (47.70%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ FFA HET +C+ E+ S +YCD +PC GK YYGRGP+Q++WN+NY G+ + G D L +PD +A + VL+F++A+W+W + H+ + G+G T ING +EC AV NR+ ++ Sbjct: 119 KREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSI--GFDGLGDPDAVARSP----VLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYY 254 HSP 2 Score: 54.6842 bits (130), Expect = 9.379e-27 Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 4 CG---ECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 CG + P D A + + I++ E F L+ +D C A+ FYT DAF+ AA +P+FG +G+ KREIAAFF Sbjct: 49 CGTGCQAGPCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFF 126
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.693e-26 Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 2 Query: 299 YCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 +C+ E+ AS DYCD N YPC GK Y+GRGPIQL+WNYNY CG+ L +LL P+L+++N ++F++ +WFWM + P ++++ G+G T IN G+EC G + AV RI ++ Sbjct: 136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNL--NLLGQPELVSSNP----TVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYY 251 HSP 2 Score: 46.9802 bits (110), Expect = 2.693e-26 Identity = 28/77 (36.36%), Postives = 38/77 (49.35%), Query Frame = 1 Query: 7 GECDPDDGTAGD--GGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 G C GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA F Sbjct: 55 GPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMF 126
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.702e-25 Identity = 60/174 (34.48%), Postives = 84/174 (48.28%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ FFA HET C+ E+ AS DYCD N +PC+ KYYGRGP+Q++WNYNY G+ + G D L +PD +A + +SFK+A+WFWM N+V+ L G+G T ING +EC AV R+ ++ Sbjct: 138 KREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNI--GFDGLRDPDRVA----QDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYY 271 HSP 2 Score: 38.891 bits (89), Expect = 1.702e-25 Identity = 23/71 (32.39%), Postives = 34/71 (47.89%), Query Frame = 1 Query: 28 GTAGDGGELG---KIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 G G GG G + + E F + ++ + C + FYT +F+ AA ++ F KREIAAFF Sbjct: 75 GGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFF 145 The following BLAST results are available for this feature:
BLAST of FC875440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875440 ID=FC875440; Name=FC875440; organism=Citrus clementina; type=EST; length=723bpback to top |