FC875440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.366e-25 Identity = 58/175 (33.14%), Postives = 85/175 (48.57%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRN-RIGFF 715 K ++ FFA HET +C+ E+ +++ YCDP +PC KYYGRGP+Q++WNYNY G + G D L +P +A + V++FK+A+WFWM S H V+ G+G TT + +ECG G N A N R+G++ Sbjct: 120 KREIAAFFAHATHETGH-------------FCYISEINKSNA-YCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAI--GFDGLGDPGRVARD----AVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMNARVGYY 252 HSP 2 Score: 51.6026 bits (122), Expect = 6.366e-25 Identity = 23/68 (33.82%), Postives = 37/68 (54.41%), Query Frame = 1 Query: 28 GTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 G+ G G + +++ F + + + C + FYT AF+ A K +P F + G++ KREIAAFF Sbjct: 61 GSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFF 127
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.381e-24 Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ +FA HET C+ E +++YC + YPC +Y+GRGP+QL+WNYNY+ G+ L D LN+PD++ + ++SFK+++WFW+ + VI+D P+ G+G T IINGG EC + R+G++ Sbjct: 97 KREIAAYFAHVTHETGH-------------LCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKEL--HFDGLNDPDIVGRDP----IISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARVGYY 233 HSP 2 Score: 50.447 bits (119), Expect = 2.381e-24 Identity = 27/69 (39.13%), Postives = 35/69 (50.72%), Query Frame = 1 Query: 25 DGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 D GDG I + F D + + CP + FYT F+EA A+P FG + RKREIAA+F Sbjct: 36 DPCEGDGTLTVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYF 104
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 3.089e-24 Identity = 56/174 (32.18%), Postives = 83/174 (47.70%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFF 715 K ++ FFA HET C+ E+ A+ DYCD + +PC+ KYYGRGP+Q++WN+NY G+ + G D L +PD +A + +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ Sbjct: 135 KREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNI--GFDGLRDPDKVA----QDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYY 268 HSP 2 Score: 41.9726 bits (97), Expect = 3.089e-24 Identity = 21/66 (31.82%), Postives = 34/66 (51.52%), Query Frame = 1 Query: 34 AGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 AG G + +++ F + + + C + FYT +F+ AA+++ F N KREIAAFF Sbjct: 78 AGAGVSVESVVTEAFFNGI-KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 142
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.864e-24 Identity = 56/175 (32.00%), Postives = 85/175 (48.57%), Query Frame = 2 Query: 209 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRN-RIGFF 715 K ++ FFA HET +C+ E+ +++ YCD + +PC KYYGRGP+Q++WNYNY G +G L +P+ +A + V++FK+A+WFWM N+V+ G+G T ING +EC G N A N R+G++ Sbjct: 131 KREIAAFFAHVTHETGH-------------FCYISEINKSNA-YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNG--LADPNRVA----QDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECN-GNNPAQMNARVGYY 263 HSP 2 Score: 48.9062 bits (115), Expect = 8.864e-24 Identity = 25/68 (36.76%), Postives = 35/68 (51.47%), Query Frame = 1 Query: 28 GTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 G G GG + + F + ++ + C + FYT AF+ A A+P F + G E KREIAAFF Sbjct: 71 GGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFF 138
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.319e-21 Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 299 YCFNREVGAASSDYCDPN----YPCRGK--YYGRGPIQLTWNYNYLRCG-----EGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFT 718 +C+ E+ AS DYCD YPC Y+GRGPIQL+WN+NY G +GLG E + N+ V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++T Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDV-----------VVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYT 254 HSP 2 Score: 41.9726 bits (97), Expect = 1.319e-21 Identity = 20/42 (47.62%), Postives = 25/42 (59.52%), Query Frame = 1 Query: 106 DKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 231 D C + FYT DAF+ A ++ FG G+E KREIAA F Sbjct: 85 DSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAF 126
BLAST of FC875440 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 533 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 670 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of FC875440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875440 ID=FC875440; Name=FC875440; organism=Citrus clementina; type=EST; length=723bpback to top |