FC875443

Overview
NameFC875443
Unique NameFC875443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_BARQU (Chaperone protein dnaK OS=Bartonella quintana GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.993e-55
Identity = 104/143 (72.73%), Postives = 119/143 (83.22%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+M+GKN KVIENSEG+RTTPSVVAF   GE LVG PAKRQAVTNP  T+F  KRLIGR+FDDP  +K+  +V YKIV+  NGDAWVE  G++YSPSQI A +L KMKETAESYLG+ V +AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENSEGARTTPSVVAFTDGGERLVGQPAKRQAVTNPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEAGKKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_BARHE (Chaperone protein dnaK OS=Bartonella henselae GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.993e-55
Identity = 104/143 (72.73%), Postives = 119/143 (83.22%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+M+GKN KVIENSEG+RTTPSVVAF   GE LVG PAKRQAVTNP  T+F  KRLIGR+FDDP  +K+  +V YKIV+  NGDAWVE  G++YSPSQI A +L KMKETAESYLG+ V +AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENSEGARTTPSVVAFTDGGERLVGQPAKRQAVTNPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEAGKKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_ZYMMO (Chaperone protein dnaK OS=Zymomonas mobilis GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 102/143 (71.33%), Postives = 121/143 (84.62%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEG  PKVIEN+EG+RTTPS+VAF +  E L+G PAKRQAVTN  NT+F  KRLIGR+FDDP T+++ ++V Y IVR  NGDAWV+A GQ YSPSQI AF+L KMKETAESYLG++V +AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGGQPKVIENAEGARTTPSIVAFTKDSERLIGQPAKRQAVTNSENTIFAVKRLIGRRFDDPVTKRDTELVPYHIVRGSNGDAWVKAGGQDYSPSQISAFILQKMKETAESYLGETVDQAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RHOCS (Chaperone protein dnaK OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 103/143 (72.03%), Postives = 122/143 (85.31%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEG   KVIEN+EG+RTTPS+VAF Q GE LVG PAKRQAVTNP NT F  KRLIGR++DDP TQK+  +V Y+IV   NGDAWVE++G+QYSPS+I AF+L KMKETAE+YLG+ V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAIMEGTQAKVIENAEGARTTPSMVAFTQGGERLVGQPAKRQAVTNPENTFFAIKRLIGRRYDDPLTQKDKGLVPYRIVGGKNGDAWVESHGKQYSPSEISAFILQKMKETAENYLGEKVTQAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RHILW (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 102/143 (71.33%), Postives = 122/143 (85.31%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+M+GK+ KVIEN+EG+RTTPS+VAF+  GE LVG PAKRQAVTNPTNTLF  KRLIGR+++DP  +K+  +V + IV+  NGDAWVEANG+ YSP+QI A +L KMKETAESYLG+ V KAVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMDGKDAKVIENAEGARTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFTIVKGDNGDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RHILE (Chaperone protein dnaK OS=Rhizobium leguminosarum GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 102/143 (71.33%), Postives = 122/143 (85.31%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+M+GK+ KVIEN+EG+RTTPS+VAF+  GE LVG PAKRQAVTNPTNTLF  KRLIGR+++DP  +K+  +V + IV+  NGDAWVEANG+ YSP+QI A +L KMKETAESYLG+ V KAVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMDGKDAKVIENAEGARTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFTIVKGDNGDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RHIL3 (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 102/143 (71.33%), Postives = 122/143 (85.31%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+M+GK+ KVIEN+EG+RTTPS+VAF+  GE LVG PAKRQAVTNPTNTLF  KRLIGR+++DP  +K+  +V + IV+  NGDAWVEANG+ YSP+QI A +L KMKETAESYLG+ V KAVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMDGKDAKVIENAEGARTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFTIVKGDNGDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_BRAJA (Chaperone protein dnaK OS=Bradyrhizobium japonicum GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 102/143 (71.33%), Postives = 120/143 (83.92%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+M+GKN KVIENSEG RTTPS+VA    GE LVG PAKRQAVTNP  T F  KRLIGR++DDP  +K+ ++V YKIV+A NGDAWVEA+GQ YSPSQ+ AF+L KMKETAE++LG+ V +AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENSEGMRTTPSIVAVTDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWVEADGQTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_BART1 (Chaperone protein dnaK OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dnaK PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 104/143 (72.73%), Postives = 119/143 (83.22%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+M+GKN KVIENSEG+RTTPSVVAF   GE LVG PAKRQAVTNP  T+F  KRLIGR+FDDP  +K+  +V YKIV+  NGDAWVE  G++YSPSQI A +L KMKETAESYLG+ V +AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENSEGARTTPSVVAFTDGGERLVGQPAKRQAVTNPEGTVFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEAGKKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_MESSB (Chaperone protein dnaK OS=Mesorhizobium sp. (strain BNC1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.811e-55
Identity = 102/143 (71.33%), Postives = 121/143 (84.62%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+M+GK+ KVIEN+EG+RTTPS+VAF    E LVG PAKRQAVTNP NT F  KRLIGR+F+DP  +K+ ++V YKIV+A NGDAWVE++G +YSPSQI A +L KMKETAESYLG+ V KAVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMDGKDAKVIENAEGARTTPSIVAFTDSDERLVGQPAKRQAVTNPENTFFAIKRLIGRRFEDPMVEKDKKLVPYKIVKADNGDAWVESHGTKYSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYF 146
The following BLAST results are available for this feature:
BLAST of FC875443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BARQU3.993e-5572.73Chaperone protein dnaK OS=Bartonella quintana GN=d... [more]
DNAK_BARHE3.993e-5572.73Chaperone protein dnaK OS=Bartonella henselae GN=d... [more]
DNAK_ZYMMO5.215e-5571.33Chaperone protein dnaK OS=Zymomonas mobilis GN=dna... [more]
DNAK_RHOCS5.215e-5572.03Chaperone protein dnaK OS=Rhodospirillum centenum ... [more]
DNAK_RHILW5.215e-5571.33Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_RHILE5.215e-5571.33Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_RHIL35.215e-5571.33Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_BRAJA5.215e-5571.33Chaperone protein dnaK OS=Bradyrhizobium japonicum... [more]
DNAK_BART15.215e-5572.73Chaperone protein dnaK OS=Bartonella tribocorum (s... [more]
DNAK_MESSB6.811e-5571.33Chaperone protein dnaK OS=Mesorhizobium sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31404A03EF CTVClemen1 Citrus clementina cDNA clone C31404A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875443 ID=FC875443; Name=FC875443; organism=Citrus clementina; type=EST; length=675bp
GGTCGAACTAAATCTCTGTTTCTCCTCACACGCAGCTGAAACAGATCGAT
TCAGCGACCTTTAGCTATGGCCACCTCCGTTCTGCTTCGACAATTACGGC
GCCGTGAAGTTGCCTCCGCCCCCATCTCCGCCTACAAATGCTTTACTAGC
AATGTTAAGCCCTCATGGGCCCCTTCTAATCTGGGTAAAAGTTGGGCGAG
TTTGACTAGACCTTTCAGTTCAAAACCTGCTGGTAATGACATTATTGGAA
TTGATCTCGGAACTACCAACTCATGTGTTGCACTTATGGAGGGAAAGAAC
CCCAAAGTTATTGAGAACTCCGAAGGATCTAGGACTACACCATCAGTTGT
AGCTTTCAATCAGAAGGGAGAGCTACTTGTGGGTACACCAGCAAAGCGTC
AGGCTGTGACCAACCCAACTAACACGCTCTTTGGCACCAAGCGTTTAATT
GGTAGAAAATTTGATGATCCCCAGACGCAAAAAGAAATGCAGATGGTTTC
ATATAAGATAGTAAGGGCCCCCAATGGGGATGCTTGGGTTGAAGCCAATG
GGCAGCAGTACTCGCCAAGTCAGATTGGGGCCTTTGTTCTGACCAAGATG
AAAGAAACTGCAGAATCCTACCTTGGAAAGTCAGTTTCAAAAGCAGTAAT
CACAGTTCCAGCTTATTTCACGATG
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