FC875443

Overview
NameFC875443
Unique NameFC875443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_SILPO (Chaperone protein dnaK OS=Silicibacter pomeroyi GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.420e-52
Identity = 101/143 (70.63%), Postives = 120/143 (83.92%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+M+G  PKVIENSEG+RTTPS+VAF  + E LVG PAKRQAVTNP+NT+FG KRLIGR+ DD +  K+ +MV + IV   NGDAWVEA G++YSPSQI A +L KMKETAESYLG+ V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAIMDGAQPKVIENSEGARTTPSIVAFTDE-ERLVGQPAKRQAVTNPSNTIFGVKRLIGRRVDDAEVTKDKKMVPFTIVNGGNGDAWVEAKGEKYSPSQISAVILGKMKETAESYLGEEVTQAVITVPAYF 145          
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_GLUDA (Chaperone protein dnaK OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.855e-52
Identity = 100/143 (69.93%), Postives = 117/143 (81.82%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+ EG   +VIENSEG+RTTPS+VAF   GE+LVG  AKRQAVTNP NTL+  KRLIGR++DDP   K+  +V Y IV   NGDAWVEA G++Y+PSQI AFVL KMKETAE+YLG+ VS+AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAIREGDETRVIENSEGARTTPSMVAFADNGEMLVGQSAKRQAVTNPANTLYAVKRLIGRRYDDPTVTKDKALVPYSIVAGDNGDAWVEAQGKKYAPSQIAAFVLGKMKETAEAYLGEPVSQAVITVPAYF 146          
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RICTY (Chaperone protein dnaK OS=Rickettsia typhi GN=dnaK PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.422e-52
Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEGK PKVI+N+EG RTTPS++AF    E LVG PAKRQAVTNP NT++  KRLIGR F DP  +K+  +V Y IV+A NGDAWVEA+  +YSPSQI AF+L KMKETAE+YLG+ V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTTPSIIAF-ANSERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYF 145          
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.422e-52
Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEGK PKVI+N+EG RTTPS++AF    E LVG PAKRQAVTNP NT++  KRLIGR F DP  +K+  +V Y IV+A NGDAWVEA+  +YSPSQI AF+L KMKETAE+YLG+ V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTTPSIIAF-ANSERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWVEADNHKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYF 145          
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RICFE (Chaperone protein dnaK OS=Rickettsia felis GN=dnaK PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.422e-52
Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEGK PKVI+N+EG RTTPS++AF    E LVG PAKRQAVTNP NT++  KRLIGR F DP  +K+  +V Y IV+A NGDAWVEA+  +YSPSQI AF+L KMKETAE+YLG+ V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTTPSIIAF-ANSERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYF 145          
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: HSP7E_DROME (Heat shock 70 kDa protein cognate 5 OS=Drosophila melanogaster GN=Hsc70-5 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.048e-52
Identity = 99/144 (68.75%), Postives = 120/144 (83.33%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEA-NGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSC+A+MEGK  KVIEN+EG+RTTPS VAF + GE LVG PAKRQAVTN  NT + TKRLIGR+FDDP+ +K++  +SYK+V+A NGDAWV + +G+ YSPSQIGAF+L KMKETAE+YL   V  AV+TVPAYF
Sbjct:   54 VIGIDLGTTNSCLAVMEGKQAKVIENAEGARTTPSHVAFTKDGERLVGMPAKRQAVTNSANTFYATKRLIGRRFDDPEVKKDITNLSYKVVKASNGDAWVSSTDGKVYSPSQIGAFILMKMKETAEAYLNTPVKNAVVTVPAYF 197          
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RICRS (Chaperone protein dnaK OS=Rickettsia rickettsii (strain Sheila Smith) GN=dnaK PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.048e-52
Identity = 100/143 (69.93%), Postives = 117/143 (81.82%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEGK PKVIEN+EG RTTPS++AF   GE LVG  AKRQAVTNP NT++  KRLIGR F DP  +K+  +V Y IV+A NGDAWVEA+  +YSPSQI AF+L KMKETAE+YLG  V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAF-ANGEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYF 145          
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RICRO (Chaperone protein dnaK OS=Rickettsia rickettsii (strain Iowa) GN=dnaK PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.048e-52
Identity = 100/143 (69.93%), Postives = 117/143 (81.82%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEGK PKVIEN+EG RTTPS++AF   GE LVG  AKRQAVTNP NT++  KRLIGR F DP  +K+  +V Y IV+A NGDAWVEA+  +YSPSQI AF+L KMKETAE+YLG  V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAF-ANGEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYF 145          
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RICCN (Chaperone protein dnaK OS=Rickettsia conorii GN=dnaK PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.048e-52
Identity = 100/143 (69.93%), Postives = 117/143 (81.82%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEGK PKVIEN+EG RTTPS++AF   GE LVG  AKRQAVTNP NT++  KRLIGR F DP  +K+  +V Y IV+A NGDAWVEA+  +YSPSQI AF+L KMKETAE+YLG  V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAF-ANGEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYF 145          
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RICAE (Chaperone protein dnaK OS=Rickettsia africae (strain ESF-5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.048e-52
Identity = 100/143 (69.93%), Postives = 117/143 (81.82%), Query Frame = 1
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEGK PKVIEN+EG RTTPS++AF   GE LVG  AKRQAVTNP NT++  KRLIGR F DP  +K+  +V Y IV+A NGDAWVEA+  +YSPSQI AF+L KMKETAE+YLG  V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAF-ANGEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYF 145          
The following BLAST results are available for this feature:
BLAST of FC875443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SILPO1.420e-5270.63Chaperone protein dnaK OS=Silicibacter pomeroyi GN... [more]
DNAK_GLUDA1.855e-5269.93Chaperone protein dnaK OS=Gluconacetobacter diazot... [more]
DNAK_RICTY2.422e-5269.23Chaperone protein dnaK OS=Rickettsia typhi GN=dnaK... [more]
DNAK_RICPR2.422e-5269.23Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_RICFE2.422e-5269.23Chaperone protein dnaK OS=Rickettsia felis GN=dnaK... [more]
HSP7E_DROME7.048e-5268.75Heat shock 70 kDa protein cognate 5 OS=Drosophila ... [more]
DNAK_RICRS7.048e-5269.93Chaperone protein dnaK OS=Rickettsia rickettsii (s... [more]
DNAK_RICRO7.048e-5269.93Chaperone protein dnaK OS=Rickettsia rickettsii (s... [more]
DNAK_RICCN7.048e-5269.93Chaperone protein dnaK OS=Rickettsia conorii GN=dn... [more]
DNAK_RICAE7.048e-5269.93Chaperone protein dnaK OS=Rickettsia africae (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31404A03EF CTVClemen1 Citrus clementina cDNA clone C31404A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875443 ID=FC875443; Name=FC875443; organism=Citrus clementina; type=EST; length=675bp
GGTCGAACTAAATCTCTGTTTCTCCTCACACGCAGCTGAAACAGATCGAT
TCAGCGACCTTTAGCTATGGCCACCTCCGTTCTGCTTCGACAATTACGGC
GCCGTGAAGTTGCCTCCGCCCCCATCTCCGCCTACAAATGCTTTACTAGC
AATGTTAAGCCCTCATGGGCCCCTTCTAATCTGGGTAAAAGTTGGGCGAG
TTTGACTAGACCTTTCAGTTCAAAACCTGCTGGTAATGACATTATTGGAA
TTGATCTCGGAACTACCAACTCATGTGTTGCACTTATGGAGGGAAAGAAC
CCCAAAGTTATTGAGAACTCCGAAGGATCTAGGACTACACCATCAGTTGT
AGCTTTCAATCAGAAGGGAGAGCTACTTGTGGGTACACCAGCAAAGCGTC
AGGCTGTGACCAACCCAACTAACACGCTCTTTGGCACCAAGCGTTTAATT
GGTAGAAAATTTGATGATCCCCAGACGCAAAAAGAAATGCAGATGGTTTC
ATATAAGATAGTAAGGGCCCCCAATGGGGATGCTTGGGTTGAAGCCAATG
GGCAGCAGTACTCGCCAAGTCAGATTGGGGCCTTTGTTCTGACCAAGATG
AAAGAAACTGCAGAATCCTACCTTGGAAAGTCAGTTTCAAAAGCAGTAAT
CACAGTTCCAGCTTATTTCACGATG
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