FC875443

Overview
NameFC875443
Unique NameFC875443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_RALPJ (Chaperone protein dnaK OS=Ralstonia pickettii (strain 12J) GN=dnaK PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.048e-52
Identity = 96/143 (67.13%), Postives = 119/143 (83.22%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            IIGIDLGTTNSCVA+MEG  PKVIEN+EG+RTTPS++A+ + GE+LVG PAKRQAVTNP NTL+  KRLIGRKF++ + QK++ ++ Y IV+A NGDAWVE  GQ+ +P QI A  L KMK+TAE YLG+ V++AVITVPAYF
Sbjct:    4 IIGIDLGTTNSCVAIMEGNTPKVIENAEGARTTPSIIAYMEDGEILVGAPAKRQAVTNPKNTLYAVKRLIGRKFEEKEVQKDIGLMPYSIVKADNGDAWVEVRGQKLAPPQISAETLRKMKKTAEDYLGEEVTEAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_METFK (Chaperone protein dnaK OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaK PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.048e-52
Identity = 97/143 (67.83%), Postives = 119/143 (83.22%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            IIGIDLGTTNSCVA+MEG  P+VIEN+EG+RTTPSV+A+ + GE+LVG PAKRQAVTNP NTLF  KRLIGR+FD+ + QK++ ++ Y I +A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYF
Sbjct:    4 IIGIDLGTTNSCVAVMEGGKPRVIENAEGARTTPSVIAYQEDGEILVGAPAKRQAVTNPKNTLFAVKRLIGRRFDEKEVQKDIGLMPYTITKADNGDAWVEVRGQKLAPPQISAEVLRKMKKTAEDYLGEEVTEAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_NITOC (Chaperone protein dnaK OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaK PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.570e-51
Identity = 98/143 (68.53%), Postives = 118/143 (82.52%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            IIGIDLGTTNSCVALMEG  P+VIEN+EG RTTPSVVAF ++GE LVG  AKRQA+TNP NTL+  KRLIGR+FD+   Q++++MV YKIV+A NGDAWVEA G++ +P ++ A VL KMK+TAE YLG+ V  AVITVPAYF
Sbjct:    4 IIGIDLGTTNSCVALMEGNKPRVIENAEGDRTTPSVVAFTKEGETLVGQSAKRQAITNPQNTLYAIKRLIGRRFDEEVVQRDIKMVPYKIVKADNGDAWVEATGKKMAPPEVSANVLRKMKKTAEDYLGEEVEAAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_PSESM (Chaperone protein dnaK OS=Pseudomonas syringae pv. tomato GN=dnaK PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.051e-51
Identity = 97/143 (67.83%), Postives = 120/143 (83.92%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            IIGIDLGTTNSCV+++E  N KVI+N+EG+RTTPS++A+   GE+LVG  AKRQAVTNP NTL+  KRLIGRKFD+   QK++QMV YKIV+A NGDAWVE NGQ+ +P QI A +L KMK+TAE YLG++V++AVITVPAYF
Sbjct:    4 IIGIDLGTTNSCVSILENGNVKVIDNAEGTRTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRKFDEQVVQKDIQMVPYKIVKADNGDAWVEVNGQKMAPPQISAEILKKMKKTAEDYLGEAVTEAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_ACIF5 (Chaperone protein dnaK OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=dnaK PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.051e-51
Identity = 96/143 (67.13%), Postives = 118/143 (82.52%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEG   KVIENSEG RTTPS+VA  ++GE+LVG  AKRQAVTNP NT++  KRLIGRKFDD + QK+++ V YK+++A NGDAWVE   ++YS  QI AF+L KMK+TAE YLG+ V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGDKVKVIENSEGKRTTPSIVAITEEGEVLVGEAAKRQAVTNPENTVYEVKRLIGRKFDDAEVQKDLKHVPYKVIKADNGDAWVEVRDKKYSAQQISAFILQKMKKTAEDYLGEKVTEAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_ACIF2 (Chaperone protein dnaK OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=dnaK PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.051e-51
Identity = 96/143 (67.13%), Postives = 118/143 (82.52%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            +IGIDLGTTNSCVA+MEG   KVIENSEG RTTPS+VA  ++GE+LVG  AKRQAVTNP NT++  KRLIGRKFDD + QK+++ V YK+++A NGDAWVE   ++YS  QI AF+L KMK+TAE YLG+ V++AVITVPAYF
Sbjct:    4 VIGIDLGTTNSCVAVMEGDKVKVIENSEGKRTTPSIVAITEEGEVLVGEAAKRQAVTNPENTVYEVKRLIGRKFDDAEVQKDLKHVPYKVIKADNGDAWVEVRDKKYSAQQISAFILQKMKKTAEDYLGEKVTEAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_PSEU2 (Chaperone protein dnaK OS=Pseudomonas syringae pv. syringae (strain B728a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.678e-51
Identity = 97/143 (67.83%), Postives = 120/143 (83.92%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            IIGIDLGTTNSCV+++E  N KVIEN+EG+RTTPS++A+   GE+LVG  AKRQAVTNP NTL+  KRLIGRKF++   QK++QMV YKIV+A NGDAWVE NGQ+ +P QI A +L KMK+TAE YLG++V++AVITVPAYF
Sbjct:    4 IIGIDLGTTNSCVSILENGNVKVIENAEGTRTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRKFEEDVVQKDIQMVPYKIVKADNGDAWVEVNGQKMAPPQISAEILKKMKKTAEDYLGEAVTEAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_PSESG (Chaperone protein dnaK OS=Pseudomonas syringae pv. glycinea GN=dnaK PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.678e-51
Identity = 97/143 (67.83%), Postives = 120/143 (83.92%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            IIGIDLGTTNSCV+++E  N KVIEN+EG+RTTPS++A+   GE+LVG  AKRQAVTNP NTL+  KRLIGRKF++   QK++QMV YKIV+A NGDAWVE NGQ+ +P QI A +L KMK+TAE YLG++V++AVITVPAYF
Sbjct:    4 IIGIDLGTTNSCVSILENGNVKVIENAEGTRTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRKFEEDVVQKDIQMVPYKIVKADNGDAWVEVNGQKMAPPQISAEILKKMKKTAEDYLGEAVTEAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_PSE14 (Chaperone protein dnaK OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.678e-51
Identity = 97/143 (67.83%), Postives = 120/143 (83.92%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            IIGIDLGTTNSCV+++E  N KVIEN+EG+RTTPS++A+   GE+LVG  AKRQAVTNP NTL+  KRLIGRKF++   QK++QMV YKIV+A NGDAWVE NGQ+ +P QI A +L KMK+TAE YLG++V++AVITVPAYF
Sbjct:    4 IIGIDLGTTNSCVSILENGNVKVIENAEGTRTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRKFEEDVVQKDIQMVPYKIVKADNGDAWVEVNGQKMAPPQISAEILKKMKKTAEDYLGEAVTEAVITVPAYF 146
[Close]
BLAST of FC875443 vs. ExPASy Swiss-Prot
Match: DNAK_HERAR (Chaperone protein dnaK OS=Herminiimonas arsenicoxydans GN=dnaK PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.678e-51
Identity = 96/143 (67.13%), Postives = 118/143 (82.52%), Query Frame = 1 
Query:  241 IIGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYF 669
            IIGIDLGTTNSCVA+MEG  PKVIENSEG+RTTPSV+A+ + GE+LVG PAKRQAVTNP NTL+  KRLIGRKFD+ + QK++ M+ Y+IV+A NGDAW+    ++ +P QI A  L KMK+TAE YLG+ V++AVITVPAYF
Sbjct:    4 IIGIDLGTTNSCVAIMEGGKPKVIENSEGARTTPSVIAYQEDGEILVGAPAKRQAVTNPKNTLYAVKRLIGRKFDEKEVQKDIGMMPYQIVKADNGDAWISVRDKKLAPPQISAETLRKMKKTAEDYLGEEVTEAVITVPAYF 146
The following BLAST results are available for this feature:
BLAST of FC875443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RALPJ7.048e-5267.13Chaperone protein dnaK OS=Ralstonia pickettii (str... [more]
DNAK_METFK7.048e-5267.83Chaperone protein dnaK OS=Methylobacillus flagella... [more]
DNAK_NITOC1.570e-5168.53Chaperone protein dnaK OS=Nitrosococcus oceani (st... [more]
DNAK_PSESM2.051e-5167.83Chaperone protein dnaK OS=Pseudomonas syringae pv.... [more]
DNAK_ACIF52.051e-5167.13Chaperone protein dnaK OS=Acidithiobacillus ferroo... [more]
DNAK_ACIF22.051e-5167.13Chaperone protein dnaK OS=Acidithiobacillus ferroo... [more]
DNAK_PSEU22.678e-5167.83Chaperone protein dnaK OS=Pseudomonas syringae pv.... [more]
DNAK_PSESG2.678e-5167.83Chaperone protein dnaK OS=Pseudomonas syringae pv.... [more]
DNAK_PSE142.678e-5167.83Chaperone protein dnaK OS=Pseudomonas syringae pv.... [more]
DNAK_HERAR2.678e-5167.13Chaperone protein dnaK OS=Herminiimonas arsenicoxy... [more]

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Properties
Property NameValue
Genbank descriptionC31404A03EF CTVClemen1 Citrus clementina cDNA clone C31404A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875443 ID=FC875443; Name=FC875443; organism=Citrus clementina; type=EST; length=675bp
GGTCGAACTAAATCTCTGTTTCTCCTCACACGCAGCTGAAACAGATCGAT
TCAGCGACCTTTAGCTATGGCCACCTCCGTTCTGCTTCGACAATTACGGC
GCCGTGAAGTTGCCTCCGCCCCCATCTCCGCCTACAAATGCTTTACTAGC
AATGTTAAGCCCTCATGGGCCCCTTCTAATCTGGGTAAAAGTTGGGCGAG
TTTGACTAGACCTTTCAGTTCAAAACCTGCTGGTAATGACATTATTGGAA
TTGATCTCGGAACTACCAACTCATGTGTTGCACTTATGGAGGGAAAGAAC
CCCAAAGTTATTGAGAACTCCGAAGGATCTAGGACTACACCATCAGTTGT
AGCTTTCAATCAGAAGGGAGAGCTACTTGTGGGTACACCAGCAAAGCGTC
AGGCTGTGACCAACCCAACTAACACGCTCTTTGGCACCAAGCGTTTAATT
GGTAGAAAATTTGATGATCCCCAGACGCAAAAAGAAATGCAGATGGTTTC
ATATAAGATAGTAAGGGCCCCCAATGGGGATGCTTGGGTTGAAGCCAATG
GGCAGCAGTACTCGCCAAGTCAGATTGGGGCCTTTGTTCTGACCAAGATG
AAAGAAACTGCAGAATCCTACCTTGGAAAGTCAGTTTCAAAAGCAGTAAT
CACAGTTCCAGCTTATTTCACGATG
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