FC875449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 53/118 (44.92%), Postives = 71/118 (60.17%), Query Frame = 2 Query: 2 YRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 Y + T Y +P DE AL++AVA + PVSV I+ +F Y+SG++ C +++HGV VGYGT +G DYW+VKNSWG ++G+ GYIRM RN CGIA SY Sbjct: 224 YNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARN----NKNHCGIASYCSY 337
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 2 Query: 2 YRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGT-SLDHGVTAVGYGT-ENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 + K T + D+P DEK + +AVA PVSVAI+ +FQ Y G++ +C +LDHGV VG+GT E+G DYW+VKNSWG++WG+ G+I+M RN +CGIA +SY Sbjct: 253 FNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN----KENQCGIASASSY 368
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20 Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 2 Query: 2 YRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF-TGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 + N+ T + ++ E LQ+AV + P+SV I+ +FQ Y SG++ C S LDH V AVGYG+E G D+W+VKNSW +SWG+ GYI+M RN CGIA ASY Sbjct: 206 FDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRN----RNNNCGIATVASY 320
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 2 YRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 Y + T Y ++P E L++AVAN+ PV V ++ +F LY SG++ C ++HGV +GYG NG +YW+VKNSWGS++GE GYIRM RN CGIA SY Sbjct: 214 YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKG----NHCGIASYPSY 327
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 2 Query: 2 YRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGG-MAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 Y + T Y ++P DE+AL++AVA + PVSV I+ +F LY+SG++ C +++HGV VGYGT +G DYW+VKNSWG +G+ GYIRM RN CGIA SY Sbjct: 213 YDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARN----NKNHCGIASYCSY 327
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 52/118 (44.07%), Postives = 70/118 (59.32%), Query Frame = 2 Query: 2 YRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 Y + T Y ++P E L++AVAN+ PVSV ++ +F LY SG++ C +++HGV VGYG NG +YW+VKNSWG ++GE GYIRM RN CGIA SY Sbjct: 215 YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG----NHCGIASFPSY 328
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 2 Query: 2 YRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 Y + T Y ++P E+AL++AVAN+ PVSV I+ +F LY++G++ C +++HGV VGYG +G DYW+VKNSWG +G+ GYIRM RN CGIA SY Sbjct: 215 YDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSG----NHCGIANYPSY 328
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 55/119 (46.22%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 23 VTIDDYEDVPLNDE-------KALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 VTID YE + ++DE +A A+ QP+SV+I+ F LY GI+ G TS ++H V VGYG+ +G DYWI KNSWG WGE GYI ++RN G L G CG+ ASY Sbjct: 239 VTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAKD--FHLYTGGIYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGFDWGEDGYIWIQRN-TGNLLGVCGMNYFASY 354
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 52/119 (43.70%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 2 YRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF-TGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 + N T Y + E AL+ A + P+SVAI+ +FQ Y +G++ C +S LDH V AVGYG+E G D+W+VKNSW +SWGE GYI+M RN CGIA +A Y Sbjct: 205 FNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWATSWGESGYIKMARN----RNNNCGIATDACY 319
BLAST of FC875449 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 2 YRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF--TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 349 Y K Y ++P ++EKAL++AVA PVSV I+ +FQ Y G++ TG +++H V AVGYG + G +WI+KNSWG+ WG GY+ + RN+ T CGIA AS+ Sbjct: 217 YSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGAQKGTKHWIIKNSWGTEWGNKGYVLLARNMKQT----CGIANLASF 331 The following BLAST results are available for this feature:
BLAST of FC875449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875449 ID=FC875449; Name=FC875449; organism=Citrus clementina; type=EST; length=699bpback to top |