FC875450

Overview
NameFC875450
Unique NameFC875450
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1D_BOVIN (Casein kinase I isoform delta OS=Bos taurus GN=CSNK1D PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 86/112 (76.79%), Postives = 99/112 (88.39%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ME RVGN++RLGRKIGSGSFG+IYLGT+I   EEVAIKLE VKTKHPQL  ESK+Y+++QGG GIP +RW G EGDYNV+VM+LLGPSLEDLFNFCSRK SLKTVL+LA+ M
Sbjct:    1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1D_XENLA (Casein kinase I isoform delta OS=Xenopus laevis GN=csnk1d PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45
Identity = 85/112 (75.89%), Postives = 100/112 (89.29%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ME RVGN++RLGRKIGSGSFG+IYLGT+I  +EEVAIKLE VKTKHPQL  ESK+Y+++QGG GIP ++W G EGDYNV+VM+LLGPSLEDLFNFCSRK SLKTVL+LA+ M
Sbjct:    1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAASEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1DB_DANRE (Casein kinase I isoform delta-B OS=Danio rerio GN=csnk1db PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45
Identity = 85/112 (75.89%), Postives = 99/112 (88.39%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ME RVGN++RLGRKIGSGSFG+IYLGT+I   EEVAIKLE VKTKHPQL  ESK+Y+++QGG GIP ++W G EGDYNV+VM+LLGPSLEDLFNFCSRK SLKTVL+LA+ M
Sbjct:    1 MELRVGNRYRLGRKIGSGSFGDIYLGTDISVGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1_EIMTE (Casein kinase I OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.061e-44
Identity = 82/112 (73.21%), Postives = 102/112 (91.07%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            M+ RVG K+RLGRKIGSGSFG+IYLGTNI T +EVAIKLE+V+++HPQL+YESKLY+IL GG GIP + W+G+EGDYNV++++LLGPSLEDLF+ C+RKLSLKTVLMLA+ M
Sbjct:    1 MDVRVGGKYRLGRKIGSGSFGDIYLGTNISTGDEVAIKLESVRSRHPQLIYESKLYKILTGGIGIPTLYWYGIEGDYNVMIIELLGPSLEDLFSICNRKLSLKTVLMLADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1D_XENTR (Casein kinase I isoform delta OS=Xenopus tropicalis GN=csnk1d PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.809e-44
Identity = 85/112 (75.89%), Postives = 99/112 (88.39%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ME RVGN++RLGRKIGSGSFG+IYLGT+I   EEVAIKLE VKTKHPQL  ESK+Y+++QGG GIP ++W G EGDYNV+VM+LLGPSLEDLFNFCSRK SLKTVL+LA+ M
Sbjct:    1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAAEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1_DICDI (Casein kinase I OS=Dictyostelium discoideum GN=cak1-1 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.086e-44
Identity = 83/112 (74.11%), Postives = 95/112 (84.82%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            M+ R+G K+R+ RKIG GSFGEIYLGTNI TNEEVAIKLE  K  HPQLL+ESKLY+I QGG GIP V+WFG +GDYN++VMDLLGPSLEDLFN+C RK SLKTVLML + M
Sbjct:    1 MDLRIGGKYRISRKIGGGSFGEIYLGTNISTNEEVAIKLEPAKAIHPQLLFESKLYKIFQGGIGIPAVKWFGFDGDYNIMVMDLLGPSLEDLFNYCGRKFSLKTVLMLGDQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1D_PONAB (Casein kinase I isoform delta OS=Pongo abelii GN=CSNK1D PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.979e-44
Identity = 84/112 (75.00%), Postives = 98/112 (87.50%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ME RVGN++RLGRKIGSGSFG+IYLGT+I   EEVAIKLE VKTK PQL  ESK+Y+++QGG GIP +RW G EGDYNV+VM+LLGPSLEDLFNFCSRK SLKT+L+LA+ M
Sbjct:    1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKPPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTILLLADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: HHP1_SCHPO (Casein kinase I homolog hhp1 OS=Schizosaccharomyces pombe GN=hhp1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.173e-43
Identity = 81/114 (71.05%), Postives = 100/114 (87.72%), Query Frame = 2
Query:  320 VSMEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ++++ R+GNK+R+GRKIGSGSFG+IYLGTN+ + EEVAIKLE+ + KHPQL YE ++YRIL GG GIP VRWFGVE DYN +VMDLLGPSLEDLFNFC+RK SLKTVL+LA+ +
Sbjct:    1 MALDLRIGNKYRIGRKIGSGSFGDIYLGTNVVSGEEVAIKLESTRAKHPQLEYEYRVYRILSGGVGIPFVRWFGVECDYNAMVMDLLGPSLEDLFNFCNRKFSLKTVLLLADQL 114          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: DCO_DROME (Discs overgrown protein kinase OS=Drosophila melanogaster GN=dco PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.000e-43
Identity = 84/112 (75.00%), Postives = 96/112 (85.71%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ME RVGNK+RLGRKIGSGSFG+IYLGT I T EEVAIKLE ++TKHPQL  ESK Y+ +QGG GIP + W G EGDYNV+VM+LLGPSLEDLFNFCSR+ SLKTVL+LA+ M
Sbjct:    1 MELRVGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLHIESKFYKTMQGGIGIPRIIWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1A_XENLA (Casein kinase I isoform alpha OS=Xenopus laevis GN=csnk1a1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.927e-42
Identity = 80/108 (74.07%), Postives = 94/108 (87.04%), Query Frame = 2
Query:  338 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            VG K++L RKIGSGSFG+IYL  NI   EEVA+KLE+ K +HPQLLYESKLY+ILQGG GIP++RW+G E DYNVLVMDLLGPSLEDLFNFCSR+ ++KTVLMLA+ M
Sbjct:   13 VGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQM 120          
The following BLAST results are available for this feature:
BLAST of FC875450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
KC1D_BOVIN4.761e-4576.79Casein kinase I isoform delta OS=Bos taurus GN=CSN... [more]
KC1D_XENLA8.121e-4575.89Casein kinase I isoform delta OS=Xenopus laevis GN... [more]
KC1DB_DANRE8.121e-4575.89Casein kinase I isoform delta-B OS=Danio rerio GN=... [more]
KC1_EIMTE1.061e-4473.21Casein kinase I OS=Eimeria tenella PE=2 SV=1[more]
KC1D_XENTR1.809e-4475.89Casein kinase I isoform delta OS=Xenopus tropicali... [more]
KC1_DICDI3.086e-4474.11Casein kinase I OS=Dictyostelium discoideum GN=cak... [more]
KC1D_PONAB8.979e-4475.00Casein kinase I isoform delta OS=Pongo abelii GN=C... [more]
HHP1_SCHPO1.173e-4371.05Casein kinase I homolog hhp1 OS=Schizosaccharomyce... [more]
DCO_DROME2.000e-4375.00Discs overgrown protein kinase OS=Drosophila melan... [more]
KC1A_XENLA4.927e-4274.07Casein kinase I isoform alpha OS=Xenopus laevis GN... [more]

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Properties
Property NameValue
Genbank descriptionC31404B01EF CTVClemen1 Citrus clementina cDNA clone C31404B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875450 ID=FC875450; Name=FC875450; organism=Citrus clementina; type=EST; length=667bp
AAAATTAGATATGCATATGAAGATAGCAAAACGATAGCGTTTCATTAACC
TAACTCTGAGTCCTGACCATAATTTCTTTCCTTTTTTTTCGTTTTTCCTT
TTTAAAATCTTGAAGAAAAAGAAACCCTAGATCTTCAAATTTATCTTCCT
ACTCACATTTTTTGTCGAGGAAATTTCTTTGCAATTTTTATCGGTTGTCG
GTGCGGTTGATTCGCTGCAGACTGTCGTGTTTTTTTTATAGCTTTTTTAA
CTTTCATCTTTCGATAATTTCAGTTTTTAGTTAGGGTTCTGCAATAGGGC
TAGGGTTTCAATCGCAATTGTATCGATGGAGCCACGTGTCGGGAACAAAT
TTCGGTTGGGTCGGAAGATCGGAAGCGGGTCGTTTGGAGAGATCTATCTT
GGCACTAATATTCAGACAAATGAAGAGGTCGCCATTAAGCTTGAAAATGT
CAAGACAAAGCATCCGCAGTTGTTATATGAATCCAAATTATACAGAATAC
TACAGGGAGGAACTGGGATCCCAAATGTGAGATGGTTTGGAGTGGAAGGA
GACTATAATGTTCTGGTGATGGATTTACTTGGACCTAGTCTTGAAGATCT
ATTTAACTTCTGCAGCAGGAAACTTTCTTTGAAGACAGTTCTTATGCTTG
CAGAATCAATGGATCAT
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