FC875450

Overview
NameFC875450
Unique NameFC875450
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1_PLAYO (Casein kinase I OS=Plasmodium yoelii yoelii GN=CK1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.099e-39
Identity = 73/112 (65.18%), Postives = 93/112 (83.04%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ME RV NK+ LG+K+GSGSFG+IY+  +I T EE A+KLE+ ++KHPQLLYESKLY+IL GG G+P V W+G+EGD+ ++V+DLLGPSLEDLF  C+RK SLKTVLM A+ M
Sbjct:    1 MEIRVANKYALGKKLGSGSFGDIYVAKDIVTMEEFAVKLESTRSKHPQLLYESKLYKILGGGIGVPKVYWYGIEGDFTIMVLDLLGPSLEDLFTLCNRKFSLKTVLMTADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1_PLAF7 (Casein kinase I OS=Plasmodium falciparum (isolate 3D7) GN=CK1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.099e-39
Identity = 73/112 (65.18%), Postives = 93/112 (83.04%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ME RV NK+ LG+K+GSGSFG+IY+  +I T EE A+KLE+ ++KHPQLLYESKLY+IL GG G+P V W+G+EGD+ ++V+DLLGPSLEDLF  C+RK SLKTVLM A+ M
Sbjct:    1 MEIRVANKYALGKKLGSGSFGDIYVAKDIVTMEEFAVKLESTRSKHPQLLYESKLYKILGGGIGVPKVYWYGIEGDFTIMVLDLLGPSLEDLFTLCNRKFSLKTVLMTADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1_PLAF4 (Casein kinase I OS=Plasmodium falciparum (isolate Dd2) GN=CK1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.530e-38
Identity = 72/112 (64.29%), Postives = 92/112 (82.14%), Query Frame = 2
Query:  326 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ME RV NK+ LG+K+GSGSFG+IY+  +I T EE A+KLE+ ++KHPQLLYESKLY+IL GG G+P V W+G+EGD+ ++V+DLLGPSLEDLF  C+RK SLKTV M A+ M
Sbjct:    1 MEIRVANKYALGKKLGSGSFGDIYVAKDIVTMEEFAVKLESTRSKHPQLLYESKLYKILGGGIGVPKVYWYGIEGDFTIMVLDLLGPSLEDLFTLCNRKFSLKTVRMTADQM 112          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1A_DROME (Casein kinase I isoform alpha OS=Drosophila melanogaster GN=CkIalpha PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.813e-36
Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 2
Query:  338 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            VG K+R+ RKIGSGSFG+IYLG +IQ+ EEVAIK+E+   +HPQLLYE+KLYRIL GG G P +R  G E ++N LVMDLLGPSLEDLFNFC+R  ++KTVLML + M
Sbjct:   16 VGGKYRVIRKIGSGSFGDIYLGMSIQSGEEVAIKMESAHARHPQLLYEAKLYRILSGGVGFPRIRHHGKEKNFNTLVMDLLGPSLEDLFNFCTRHFTIKTVLMLVDQM 123          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: HHP2_SCHPO (Casein kinase I homolog hhp2 OS=Schizosaccharomyces pombe GN=hhp2 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.276e-36
Identity = 68/109 (62.39%), Postives = 87/109 (79.82%), Query Frame = 2
Query:  335 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            ++GNK+R+GRKIGSGSFG+IYLG N    E+VA+KLE +K +H QL YE ++Y IL+G  GIP +RWFGV   YN +VMDLLGPSLEDLF +C RK +LKTVL+LA+ +
Sbjct:    7 KIGNKYRIGRKIGSGSFGQIYLGLNTVNGEQVAVKLEPLKARHHQLEYEFRVYNILKGNIGIPTIRWFGVTNSYNAMVMDLLGPSLEDLFCYCGRKFTLKTVLLLADQL 115          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1B_BOVIN (Casein kinase I isoform beta OS=Bos taurus GN=CSNK1B PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.000e-36
Identity = 68/108 (62.96%), Postives = 88/108 (81.48%), Query Frame = 2
Query:  338 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            VG +++L R+IG GSFG +YL  ++  +E+VA+KLE+  T+ P+LL+E +LY  LQGG GIP +RW+G E DYNVLVMDLLGPSLEDLFNFCSR+ S+KTVLMLA+ M
Sbjct:   13 VGGRYKLVREIGFGSFGHVYLAIDLTNHEQVAVKLESENTRQPRLLHEKELYNFLQGGVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQM 120          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1A_PIG (Casein kinase I isoform alpha (Fragment) OS=Sus scrofa GN=CSNK1A1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31
Identity = 62/80 (77.50%), Postives = 73/80 (91.25%), Query Frame = 2
Query:  422 EEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAESM 661
            EEVA+KLE+ K +HPQLLYESKLY+ILQGG GIP++RW+G E DYNVLVMDLLGPSLEDLFNFCSR+ ++KTVLMLA+ M
Sbjct:    2 EEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQM 81          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1G3_RAT (Casein kinase I isoform gamma-3 OS=Rattus norvegicus GN=Csnk1g3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.100e-28
Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  338 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLA 652
            VG  FR+G+KIG G+FGE+ LG N+ TNE VAIKLE +K++ PQL  E + Y+ L  G GIP V +FG  G YN +V++LLGPSLEDLF+ C R  SLKTVLM+A
Sbjct:   39 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIA 143          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1G3_PONAB (Casein kinase I isoform gamma-3 OS=Pongo abelii GN=CSNK1G3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.100e-28
Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  338 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLA 652
            VG  FR+G+KIG G+FGE+ LG N+ TNE VAIKLE +K++ PQL  E + Y+ L  G GIP V +FG  G YN +V++LLGPSLEDLF+ C R  SLKTVLM+A
Sbjct:   39 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIA 143          
BLAST of FC875450 vs. ExPASy Swiss-Prot
Match: KC1G3_MOUSE (Casein kinase I isoform gamma-3 OS=Mus musculus GN=Csnk1g3 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.100e-28
Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  338 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLA 652
            VG  FR+G+KIG G+FGE+ LG N+ TNE VAIKLE +K++ PQL  E + Y+ L  G GIP V +FG  G YN +V++LLGPSLEDLF+ C R  SLKTVLM+A
Sbjct:   39 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIA 143          
The following BLAST results are available for this feature:
BLAST of FC875450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
KC1_PLAYO5.099e-3965.18Casein kinase I OS=Plasmodium yoelii yoelii GN=CK1... [more]
KC1_PLAF75.099e-3965.18Casein kinase I OS=Plasmodium falciparum (isolate ... [more]
KC1_PLAF42.530e-3864.29Casein kinase I OS=Plasmodium falciparum (isolate ... [more]
KC1A_DROME1.813e-3666.67Casein kinase I isoform alpha OS=Drosophila melano... [more]
HHP2_SCHPO5.276e-3662.39Casein kinase I homolog hhp2 OS=Schizosaccharomyce... [more]
KC1B_BOVIN9.000e-3662.96Casein kinase I isoform beta OS=Bos taurus GN=CSNK... [more]
KC1A_PIG2.294e-3177.50Casein kinase I isoform alpha (Fragment) OS=Sus sc... [more]
KC1G3_RAT3.100e-2859.05Casein kinase I isoform gamma-3 OS=Rattus norvegic... [more]
KC1G3_PONAB3.100e-2859.05Casein kinase I isoform gamma-3 OS=Pongo abelii GN... [more]
KC1G3_MOUSE3.100e-2859.05Casein kinase I isoform gamma-3 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionC31404B01EF CTVClemen1 Citrus clementina cDNA clone C31404B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875450 ID=FC875450; Name=FC875450; organism=Citrus clementina; type=EST; length=667bp
AAAATTAGATATGCATATGAAGATAGCAAAACGATAGCGTTTCATTAACC
TAACTCTGAGTCCTGACCATAATTTCTTTCCTTTTTTTTCGTTTTTCCTT
TTTAAAATCTTGAAGAAAAAGAAACCCTAGATCTTCAAATTTATCTTCCT
ACTCACATTTTTTGTCGAGGAAATTTCTTTGCAATTTTTATCGGTTGTCG
GTGCGGTTGATTCGCTGCAGACTGTCGTGTTTTTTTTATAGCTTTTTTAA
CTTTCATCTTTCGATAATTTCAGTTTTTAGTTAGGGTTCTGCAATAGGGC
TAGGGTTTCAATCGCAATTGTATCGATGGAGCCACGTGTCGGGAACAAAT
TTCGGTTGGGTCGGAAGATCGGAAGCGGGTCGTTTGGAGAGATCTATCTT
GGCACTAATATTCAGACAAATGAAGAGGTCGCCATTAAGCTTGAAAATGT
CAAGACAAAGCATCCGCAGTTGTTATATGAATCCAAATTATACAGAATAC
TACAGGGAGGAACTGGGATCCCAAATGTGAGATGGTTTGGAGTGGAAGGA
GACTATAATGTTCTGGTGATGGATTTACTTGGACCTAGTCTTGAAGATCT
ATTTAACTTCTGCAGCAGGAAACTTTCTTTGAAGACAGTTCTTATGCTTG
CAGAATCAATGGATCAT
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