FC875453

Overview
NameFC875453
Unique NameFC875453
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17
Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 3
Query:  147 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713
            ++A LAEF+ +LL+   G+G+++ +       A  P G++  A+  G A    V    ++SGGH+NPA+T    L  Q+++   + Y +AQLLG++  + +L  VT     G L +   +                  F  +  V+A+  D   G  G+ A + +GF +    L   PF+G  MNPARSF PAV
Sbjct:   10 WRAILAEFLGSLLYTLLGLGASLRW-------APGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVVELLLTAQF--ILCVFASFDDRHDGRPGS-AALPVGFSLALGHLFGIPFTGAGMNPARSFAPAV 193          
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16
Identity = 58/188 (30.85%), Postives = 90/188 (47.87%), Query Frame = 3
Query:  150 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713
            K  ++E ++T L VF   G+A  + +  A  +      +  ++  G  + V +    +ISG H+NPAVT   A       +   FYW AQ  G++ A+F+LK V   +AV                     TF +++   A A D +  ++G +A +A+G  V    + AGP SGG MNPAR+  PAV
Sbjct:   55 KKVISEVVATFLLVFVTCGAASIYGEDNARISQ-----LGQSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAV-IGTTTPSGPHWHALAIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAV 234          
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16
Identity = 61/193 (31.61%), Postives = 89/193 (46.11%), Query Frame = 3
Query:  147 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKV----VTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713
            ++  +AE I T   V  GVGS       T  +   PS +  IA   G  +        +ISG H+NPAVT G  + G+++I+  + Y   Q +G+I  + ++KV       GL +   +                 TF LV  V    +DP +  +   AP+A+G  + A  L A   +G  MNPARSFGPAV
Sbjct:   23 WRQLMAELIGTFFLVVIGVGSC------TGGSEWSPS-IPQIAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKG-VSDPGRTDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAV 207          
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16
Identity = 61/199 (30.65%), Postives = 92/199 (46.23%), Query Frame = 3
Query:  120 FDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNK-MTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713
            F D F     K  ++E ++T L VF   G+A  + + M   + L  S      +  G  + V +    +ISG H+NPAVT   A       +   FYW AQ  G++ A+F+L+ V   + V                     TF +++   A A D +  ++G +A +A+G  V    + AGP SGG MNPAR+  PAV
Sbjct:   42 FADIFPPNLLKKVISEVVATFLLVFVTCGAASIYGEDMKRISQLGQS------VVGGLIVTVMIYATGHISGAHMNPAVTLSFAFFRHFPWIQVPFYWAAQFTGAMCAAFVLRAVLYPIEV-LGTTTPTGPHWHALVIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAV 231          
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16
Identity = 57/188 (30.32%), Postives = 89/188 (47.34%), Query Frame = 3
Query:  150 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713
            K  ++E ++T L VF   G+A  + +     +      +  ++  G  + V +    +ISG H+NPAVT   A       +   FYW AQ  G++ A+F+LK V   +AV                     TF +++   A A D +  ++G +A +A+G  V    + AGP SGG MNPAR+  PAV
Sbjct:   52 KKVISEVVATFLLVFVTCGAASIYGEDNRRISQ-----LGQSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAV-IGTTTPSGPHWHALLIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAV 231          
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16
Identity = 63/197 (31.98%), Postives = 94/197 (47.72%), Query Frame = 3
Query:  126 DSFSLGSFKAYLAEFISTLLFVFAGVGSA-IAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713
            D F     K  ++E ++T L VF   G+A I+ + ++  + L  S      I  G  + V +    +ISG H+NPAVT   A+      +   FYW AQ  G+I ASF+LK V   + V                     TF +++   A A D +  ++G +A +A+G  V    + AG  SGG MNPAR+ GPA+
Sbjct:   41 DFFPPHLLKKVVSEVVATFLLVFMTCGAAGISGSDLSRISQLGQS------IAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIHPVDV-IGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVATDTR--AVGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPAL 228          
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15
Identity = 65/197 (32.99%), Postives = 98/197 (49.75%), Query Frame = 3
Query:  147 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPT----HNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKK----GSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713
            ++  +AEF++T LF++  + + +  +K T+  A    G+  IA   G  +   V   A ISG H+NPAVTFGL L  ++++   +FY I Q LG+I    ++K    GL +      +                  TF LVYTV+ +A D K+      +  +AP+ IGF V    LA    +G  +NPARS G AV
Sbjct:   53 YRPGIAEFVATFLFLYISILTVMGVSKSTSKCAT--VGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAV 245          
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 66/203 (32.51%), Postives = 95/203 (46.80%), Query Frame = 3
Query:  135 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVV----------TGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713
            S+   +  + EF+ T   +FAG  SAI  N+        P  L  IA+  G  + V +    ++SG H NPAV+   A   +        Y  AQLLGS +A+ +L++V           G + V T+                  TF L++ + A A D  K + G+ A IAIG  +  +IL +GP SG  MNPARS GPA+
Sbjct:   38 SVSFVQKLIGEFVGTFTMIFAGC-SAIVVNETYGK----PVTLPGIALVWGLVVTVMIYSIGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTY---PSNSNTTSFVMEFIATFNLMFVISAVATD--KRATGSFAGIAIGATIVLDILFSGPISGASMNPARSLGPAL 230          
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  129 SFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG---GLAVPTHN----XXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713
            S S+   +  +AE + T   +FAG  +A+A N     A   P     IAI  G  + V V    +ISG H NPAVT   A  G+  +     Y I+Q++GS +A+  L+++ G    +    H+                     TF L++ +   A D +  ++G +A +A+G  V  N++ AGP SG  MNP RS GPA+
Sbjct:   45 SISVPFLQKLMAEVLGTYFLIFAGC-AAVAVNTQHDKAVTLPG----IAIVWGLTVMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFVIEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAM 239          
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15
Identity = 72/208 (34.62%), Postives = 89/208 (42.79%), Query Frame = 3
Query:  150 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS----------GL---VAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLL-------KVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPK--KGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGP 707
            K  +AEFI T + VF G GSA A   M A     P+          GL   VAI +  GFA+  ++    NISG H+NPAVT GL    +      + Y IAQLLG+   SF+            GGL                       TF L+ T+   A D +  KG  G    I IG  V   I   G  SG  +NPAR+FGP
Sbjct:    6 KRCIAEFIGTFILVFFGAGSA-AVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATA--PFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAG----IIIGLTVAGIITTLGNISGSSLNPARTFGP 206          
The following BLAST results are available for this feature:
BLAST of FC875453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
MIP_CHICK8.051e-1730.93Lens fiber major intrinsic protein OS=Gallus gallu... [more]
NIP23_MAIZE1.051e-1630.85Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]
AQP_HAEIX2.342e-1631.61Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
NIP22_ORYSJ3.059e-1630.65Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica G... [more]
NIP22_MAIZE3.995e-1630.32Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]
NIP21_ORYSJ3.995e-1631.98Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
PIP11_MAIZE1.518e-1532.99Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
NIP31_ARATH1.983e-1532.51Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1... [more]
NIP12_ARATH2.590e-1531.19Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2... [more]
AQPM_METTM5.769e-1534.62Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]

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Properties
Property NameValue
Genbank descriptionC31404B04EF CTVClemen1 Citrus clementina cDNA clone C31404B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875453 ID=FC875453; Name=FC875453; organism=Citrus clementina; type=EST; length=715bp
GGTGCTCGATCGAGATAAAACCTTATCTTCTTCTTCTTCTTAAGAAAGAC
TCGAGAGAGTTTTTTTTCCCCTATTCTCTAGCTCTTTCTTGATCAACAAT
GGCTATTGCCTTCGGCCGCTTCGATGATTCTTTCAGCTTAGGCTCCTTCA
AGGCCTATCTTGCTGAGTTTATCTCAACTTTGCTCTTTGTTTTCGCCGGC
GTTGGCTCGGCCATTGCTTTCAACAAGATGACAGCAGATGCAGCACTTGA
TCCATCAGGGCTAGTAGCCATCGCTATTTGCCATGGATTTGCTCTATTTG
TCGCAGTTGCAATTGGTGCTAACATCTCAGGTGGCCACGTCAACCCAGCC
GTCACTTTTGGATTGGCTCTTGGTGGCCAAATCACCATCCTCACTGGCAT
CTTCTACTGGATTGCCCAACTTCTTGGCTCTATTGTTGCCAGCTTCCTCC
TCAAAGTTGTCACTGGAGGCTTGGCAGTTCCTACCCACAATGTTGCTGCT
GGAGTTGGAGCCATTGAAGGAGTTGTGATGGAGATCATCATCACATTTGG
TTTGGTCTACACGGTCTATGCCACGGCAGCTGACCCCAAGAAGGGATCAT
TGGGCACCATTGCACCCATTGCCATTGGTTTCATTGTCGGTGCCAACATC
CTGGCCGCCGGCCCATTCTCCGGTGGTTTCATGAACCCGGCCCGTTCCTT
CGGGCCTGCCGTTGC
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