FC875453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.189e-52 Identity = 106/209 (50.72%), Postives = 136/209 (65.07%), Query Frame = 3 Query: 102 AIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALD-----PSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 A FGR D++ S +A LAEF+ST +FVFA GS ++ +K+ + A P GL+ +A+ H FALF AV+ N+SGGHVNPAVTFG +GG++T + I+YWIAQLLG+I+A LL++ T G+ TFGLVY VY+T DPK+GSLG IAP+AIG IVGANIL GPFSG MNPAR+FGPA+ Sbjct: 8 AYGFGRADEATHPDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPAL 216
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.553e-52 Identity = 105/209 (50.24%), Postives = 136/209 (65.07%), Query Frame = 3 Query: 102 AIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALD-----PSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 A FGR D++ S +A LAEF+ST +FVFAG GS +A +K+ D A P GLV +A+ H ALF AV+ N+SGGHVNPAVTF +GG+I+++ I+YW+AQL+G+I+A LL++ T GL + TF LVY VY+TA DPK+GS+G IAP+AIG IVGANIL GPF G MNPAR+FGPA+ Sbjct: 8 AYGFGRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPAL 216
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.708e-52 Identity = 101/207 (48.79%), Postives = 138/207 (66.67%), Query Frame = 3 Query: 93 STMAIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 +T +FGR D++ S +A LAEF ST +FVFAG GS +A K+ D+A L+A+A+ H FALF AV+ ++SGGHVNPAV+FG +GG+I+++ ++YWIAQLLGSIVA+ +L++VT + + TFGL+YTVY TA DPK+G++ IAP+AIG IVGANIL GPF G MNPA +FGP++ Sbjct: 2 ATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSL 208
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.708e-52 Identity = 97/200 (48.50%), Postives = 137/200 (68.50%), Query Frame = 3 Query: 114 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 GR +D+ + +A ++EF++T +FVFA GS ++ K+ D + P GLVA+++ H AL VAVA+ NISGGHVNPA+TFG LGG+++++ +FYW+AQLLG++VA+ LL++ TGG+ P TFGL+Y YAT DPK+G +GTIAP+A+GF++GAN+LA GPF G MNPAR FGPA+ Sbjct: 15 GRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMST-PGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPAL 213
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.525e-51 Identity = 97/200 (48.50%), Postives = 134/200 (67.00%), Query Frame = 3 Query: 114 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 GR +D+ + +A ++EFI+T +FVFA GS ++ KM D + GLVA+A+ H AL VAVA+ NISGGHVNPAVTFG +GG+++++ + YW+AQLLG++ A+ LL++ TGG+ P TFGL+Y YAT DPK+G +GTIAP+A+GF++GAN+LA GPF G MNPAR FGPA+ Sbjct: 14 GRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDMST-AGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPAL 212
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.607e-49 Identity = 96/202 (47.52%), Postives = 130/202 (64.36%), Query Frame = 3 Query: 114 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAAL--DPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 GR +D+ + +A ++EFI+T +FVFA GS ++ KM D + GLVA+A+ H L VAVA+ N+SGGHVNPAVTFG +GG+++++ + YW AQLLG++ A+ LL++ TGG P TFG VY YAT DPK+G LGTIAP+A+GF++GAN+LA GPF G MNPAR FGPA+ Sbjct: 16 GRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPAL 217
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.466e-47 Identity = 98/203 (48.28%), Postives = 123/203 (60.59%), Query Frame = 3 Query: 105 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 I G ++ KA + EFI+T LFVFAGVGSA+A + + + + GL A+A+ H F + V ++ G +ISGGH+NPAVT GL LGG I++ YWI QLL S A FLL +TGG+ P H TF L++TVYAT DPKKGSL P+ GF+VGANILA G FSG MNPARSFGPA+ Sbjct: 4 IELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTLV---GLFAVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPAL 202
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.239e-42 Identity = 91/191 (47.64%), Postives = 117/191 (61.26%), Query Frame = 3 Query: 141 GSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 G+ +A L+EF++T +FVFA GS KM D GL+ +A+ H AL AVA+ N SGGHVNPAVTFG+ +G +I+ YW AQLLG+++A LL++ +GG+ TFGLVYTVYATA D + G G IAP+AIG + GANILA GPF G MNPAR+FGPA+ Sbjct: 26 GATRAALSEFVATAVFVFAAEGSVYGLWKMYRDTGT-LGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPAL 214
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 2.748e-41 Identity = 92/202 (45.54%), Postives = 117/202 (57.92%), Query Frame = 3 Query: 132 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLG--------TIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 FS + +AY AEF ST LFVF VGS I+ +T D D S L+A A+ F LF AV I A++SGGHVNPAVTF A+GG IT+ + IFYW +Q+LGS A +L ++ G AVPT TF +VYTV+ A DP+ G G + + +G + GA +LAAG +G MNPARSFGPAV Sbjct: 12 FSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH-VAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAV 212
BLAST of FC875453 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.326e-40 Identity = 90/203 (44.33%), Postives = 118/203 (58.13%), Query Frame = 3 Query: 108 AFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK-VVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGFMNPARSFGPAV 713 A G ++ G +A LAE I T LFVFAGVGSA+A K+ GL A+A+ H + V V+ G ++SGGH+NPAVT GLA G+IT+ Y AQLLGS +A LL + VP H TF L++ VYAT DP++ ++G + P+ +G +VGAN+LA GPFSG MNPARSFGPA+ Sbjct: 5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPAL 206 The following BLAST results are available for this feature:
BLAST of FC875453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875453 ID=FC875453; Name=FC875453; organism=Citrus clementina; type=EST; length=715bpback to top |