FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 6.795e-63 Identity = 120/209 (57.42%), Postives = 146/209 (69.86%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 KFFVGGNWKCNGT E + K+VS LN ++ VKSSL V+AQN W+ KGGAFTGEISAE LV++ VILGHSERR ++ E +EF+G K AYALSQ LKV+AC+GE LE+REAG T +V Q KA AD ++ W+N+V+AYEPVWAIGTGKVA+P QAQEVH +R WL N S ++A+ RIIYGGS Sbjct: 48 KFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFI--YIDQVKSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAIGTGKVASPEQAQEVHAAVRDWLKTNVSADVASTVRIIYGGS 254
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.977e-62 Identity = 122/209 (58.37%), Postives = 144/209 (68.90%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 KFFVGGNWKCNGT + + K++S LN ++ VKSSL ++ QN WV KGGAFTGEIS E L +L VILGHSERR ++ E +EF+G K AYALS+GL VIAC+GE LE+REAG T +V AQ KA AD V SW NIV+AYEPVWAIGTGKVA+P QAQEVH +R WL N S E+A+ TRIIYGGS Sbjct: 65 KFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFV--YIDQVKSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGS 271
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.186e-61 Identity = 120/209 (57.42%), Postives = 145/209 (69.38%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 KFFVGGNWKCNGT + + K+VS LN + +L VKSSL ++ QN WV KGGAFTGEIS E L ++ VILGHSERR ++ E ++F+G K AYAL++GL VIAC+GE LE+REAG T +V Q KA AD V SW NIV+AYEPVWAIGTGKVA+P QAQEVH +R+WL N S E+A+ TRIIYGGS Sbjct: 64 KFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFL--YLDQVKSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAIGTGKVASPQQAQEVHVAVREWLKKNVSAEVASKTRIIYGGS 270
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CULTA (Triosephosphate isomerase OS=Culex tarsalis GN=Tpi PE=1 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 2.262e-58 Identity = 119/212 (56.13%), Postives = 140/212 (66.04%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 MGRKF VGGNWK NG + + VL G +L L +S L VAAQNC+ GAFTGEIS ML +L I VILGHSERR I E +E + DKVA+AL++GLKVIAC+GETL++REAG T V QTKAIAD+V WSN+V+AYEPVWAIGTGK A+P QAQEVH LRKW N S +++AA RI YGGS Sbjct: 1 MGRKFCVGGNWKMNGDKASIADLCKVLTTGPLNADTEVVVGCPAP--YLTLARSQLPDSVCVAAQNCYKVPKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGETLQEREAGQTEAVCFRQTKAIADKVKDWSNVVIAYEPVWAIGTGKTASPEQAQEVHAALRKWFTENVSADVSAAIRIQYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPISB_DANRE (Triosephosphate isomerase B OS=Danio rerio GN=tpi1b PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.277e-57 Identity = 113/211 (53.55%), Postives = 140/211 (66.35%), Query Frame = 1 Query: 40 GRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GRKFFVGGNWK NG + ++++ + LN + +L +S L P VAAQNC+ GAFTGEIS M+ + + VILGHSERR + E +E +G KVA+AL GL VIAC+GE L++REAG T +VV AQTK IAD V WS +VLAYEPVWAIGTGK A+P QAQEVH +LR+WL N S +A + RIIYGGS Sbjct: 3 GRKFFVGGNWKMNGDKKSIEELANTLNSAKLNPDTEVVCGAPTI--YLDYARSKLDPNIDVAAQNCYKVAKGAFTGEISPAMIKDCGVKWVILGHSERRHVFGESDELIGQKVAHALENGLGVIACIGEKLDEREAGITEKVVFAQTKFIADNVKDWSKVVLAYEPVWAIGTGKTASPQQAQEVHDKLRQWLKTNVSEAVANSVRIIYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BOMMO (Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE=1 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 4.717e-56 Identity = 115/213 (53.99%), Postives = 138/213 (64.79%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV-SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 MGRKF VGGNWK NG ++ +IV+ L +G +L VK+ + VAAQNCW GAFTGEIS M+ ++ + VILGHSERR I E +E V +KVA+AL GLKVIAC+GETLE+RE+G T EVV Q KA+ + W NIVLAYEPVWAIGTGK ATP QAQ+VH LR WL AN S ++ A RI YGGS Sbjct: 1 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAI--YLSYVKTIIPDNVEVAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.051e-55 Identity = 111/210 (52.86%), Postives = 139/210 (66.19%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RKFFVGGNWK NG + + ++++ LN + ++ + L P VAAQNC+ GAFTGEIS M+ + V+LGHSERR + E +E +G KVA+ALS+GL VIAC+GE L++REAG T +VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QAQEVH +LR WL +N S +A +TRIIYGGS Sbjct: 4 RKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_XENTR (Triosephosphate isomerase OS=Xenopus tropicalis GN=tpi1 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.372e-55 Identity = 111/210 (52.86%), Postives = 139/210 (66.19%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RKFFVGGNWK NG + + ++++ LN G+ +L + L F V+AQNC+ GAFTGEIS M+ + VILGHSERR + E +E +G KVA+ALS+ + VI C+GE L+QREAG T +VV QTKAIAD V WS +VLAYEPVWAIGTGK ATP QAQEVH +LR+WL N S ++A + RIIYGGS Sbjct: 4 RKFFVGGNWKMNGDKKSLTELINTLNSGKISADTEVVCGAPTI--YLDFARQKLDAKFAVSAQNCYKVAKGAFTGEISPAMIKDCGATWVILGHSERRHVFGESDELIGQKVAHALSENVGVIGCIGEKLDQREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLREWLKTNVSEDVAKSVRIIYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.341e-55 Identity = 110/210 (52.38%), Postives = 138/210 (65.71%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RKFFVGGNWK NG + + +++ LN + ++ + L P VAAQNC+ GAFTGEIS M+ + V+LGHSERR + E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QAQEVH +LR WL +N S +A +TRIIYGGS Sbjct: 5 RKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.341e-55 Identity = 110/210 (52.38%), Postives = 138/210 (65.71%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RKFFVGGNWK NG + + +++ LN + ++ + L P VAAQNC+ GAFTGEIS M+ + V+LGHSERR + E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QAQEVH +LR WL +N S +A +TRIIYGGS Sbjct: 5 RKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGS 212 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |