FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACC2 (Triosephosphate isomerase OS=Bacillus cereus (strain G9842) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.278e-34 Identity = 93/213 (43.66%), Postives = 116/213 (54.46%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N T E V + +GQ FL LV ++ V AQN +K GAFTGEIS L +L++ V+LGHSERR + E +E V K A GL I C GETLE+RE+G T ++VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SPE A A RI YGGS Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTLAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPK (Triosephosphate isomerase OS=Pseudomonas putida (strain KT2440) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34 Identity = 89/214 (41.59%), Postives = 124/214 (57.94%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVK-KGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK +GT V ++ L+ F+ V L V AQN V+ + GA TGE++ E LV V++GHSERR I+ E +E + K A A ++GLK + C+GETLE+REAG T+EVV Q +I + V ++++ V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGS Sbjct: 2 RRPMVAGNWKMHGTRASVAELTKGLSN--LALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PSEP1 (Triosephosphate isomerase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34 Identity = 89/214 (41.59%), Postives = 124/214 (57.94%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVK-KGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK +GT V ++ L+ F+ V L V AQN V+ + GA TGE++ E LV V++GHSERR I+ E +E + K A A ++GLK + C+GETLE+REAG T+EVV Q +I + V ++++ V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGS Sbjct: 2 RRPMVAGNWKMHGTRASVAELTKGLSN--LALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CHLCH (Triosephosphate isomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34 Identity = 91/213 (42.72%), Postives = 114/213 (53.52%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLV---KSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK V GNWK N +++ + L FL L K + AQNC + GA+TGE+SA ML VI+GHSERR E N V +V AL++GL VI CVGETL +RE+G T ++V+AQ + VS SN+V+AYEPVWAIGTGK AT AQA+EVH +R + A A RI YGGS Sbjct: 2 RKKIVVGNWKMNNGVAASEQLAADLLAA--LGSSFTGCDVGIAPTFLSLTTAGKVIAGSTIQLVAQNCHYENDGAYTGEVSAAMLKGAGCSSVIIGHSERRQFFGETNATVNLRVKKALAEGLDVILCVGETLAERESGVTGDIVSAQVREGLVGVSDISNVVIAYEPVWAIGTGKTATSAQAEEVHLMIRTLVTELYGEPAAQALRIQYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PSEAE (Triosephosphate isomerase OS=Pseudomonas aeruginosa GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.885e-34 Identity = 92/214 (42.99%), Postives = 120/214 (56.07%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKK-GGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK +GT V +++ L Q F+ V L V AQN V+ GA TGE + L ++ V++GHSERRLIL E +E V K A A S GL + CVGET +REAG T+EVVA Q ++ D V +++ V+AYEPVWAIGTG A+PAQAQEVH +R L A + E+A R++YGGS Sbjct: 2 RRPLVAGNWKMHGTHSSVAELIKGLR--QLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PSEAB (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.885e-34 Identity = 92/214 (42.99%), Postives = 120/214 (56.07%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKK-GGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK +GT V +++ L Q F+ V L V AQN V+ GA TGE + L ++ V++GHSERRLIL E +E V K A A S GL + CVGET +REAG T+EVVA Q ++ D V +++ V+AYEPVWAIGTG A+PAQAQEVH +R L A + E+A R++YGGS Sbjct: 2 RRPLVAGNWKMHGTHSSVAELIKGLR--QLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA8 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain LESB58) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.885e-34 Identity = 92/214 (42.99%), Postives = 120/214 (56.07%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKK-GGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK +GT V +++ L Q F+ V L V AQN V+ GA TGE + L ++ V++GHSERRLIL E +E V K A A S GL + CVGET +REAG T+EVVA Q ++ D V +++ V+AYEPVWAIGTG A+PAQAQEVH +R L A + E+A R++YGGS Sbjct: 2 RRPLVAGNWKMHGTHSSVAELIKGLR--QLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA7 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain PA7) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.885e-34 Identity = 93/214 (43.46%), Postives = 119/214 (55.61%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKK-GGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK +GT V ++ L Q F+ V L V AQN V+ GA TGEI+ L + V++GHSERRLIL E +E V K A A S GL + CVGET +REAG T+EVVA Q ++ D V +++ V+AYEPVWAIGTG A+PAQAQEVH +R L A + E+A R++YGGS Sbjct: 2 RRPLVAGNWKMHGTHSSVADLIKGLR--QLALPSGVDVAVMPPCLFISQVVQGLAGKAIGVGAQNSAVEPMQGALTGEIAPSQLADAGCGMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTH (Triosephosphate isomerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.885e-34 Identity = 90/214 (42.06%), Postives = 116/214 (54.21%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK GNWK N T +E + V L +G+ G+V+++ VAAQN ++ GAFTGE+S ML L + VI+GHSERR E +E V KV A GLK I CVGE+L QRE G T E+V Q K +S+ V+AYEP+WAIGTGK AT QA+EV +R+ + ++A A RI YGGS Sbjct: 1 MSRKVIAAGNWKMNKTPKEAVEFVQAL-KGRVADADTEVVVGVPFVCLPGVVEAAKGSNIKVAAQNMHWEEKGAFTGEVSGPMLAELGVDYVIIGHSERRQYFGETDETVNKKVHAAFKYGLKPIICVGESLTQREQGVTAELVRYQVKIALLGLSAEQVKEAVIAYEPIWAIGTGKTATNEQAEEVCGIIRECIKELYGQDVAEAIRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CYTH3 (Triosephosphate isomerase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.627e-34 Identity = 85/213 (39.91%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVS-VLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N T EE + S V N + L V + + AQN + K+ GAFTGEISA ML ++ + VI+GHSERR E N+ + DKV +L+ GL + C GETL QREAG + V AQ +S + +V+AYEP+WAIGTG A+ QAQE+H ++R+ L + +A I+YGGS Sbjct: 2 RKKVIAGNWKMNKTLEEGLSLASEVANMAKDEVPADVNLVMCIPYISLAAVSKVINDKVAIGAQNVYQKESGAFTGEISAPMLKSVGVKYVIIGHSERREYFGETNQQLADKVTISLANGLTPLFCCGETLAQREAGIHINFVNAQLTESLFHLSPEDFKKVVIAYEPIWAIGTGVTASDEQAQEMHAKIREHLASKYGAAVADEISILYGGS 214 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |