FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACC0 (Triosephosphate isomerase OS=Bacillus cereus (strain AH820) GN=tpiA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33 Identity = 92/213 (43.19%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N T E V + +GQ FL LV ++ V AQN +K GAFTGEIS L +L++ V+LGHSERR + E +E V K A GL I C GETLE+RE+G T ++VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SP A A RI YGGS Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPAAAEAVRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACAN (Triosephosphate isomerase OS=Bacillus anthracis GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.476e-33 Identity = 92/213 (43.19%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N T E V + +GQ FL LV ++ V AQN +K GAFTGEIS L +L++ V+LGHSERR + E +E V K A GL I C GETLE+RE+G T ++VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SP A A RI YGGS Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEVVSPAAAEAVRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_OCEIH (Triosephosphate isomerase OS=Oceanobacillus iheyensis GN=tpiA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.518e-33 Identity = 87/212 (41.04%), Postives = 112/212 (52.83%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N E + ++ + LV+ + VAAQN + GAFTGE+S ML +L + V+LGHSERR + E NE V K A + L I CVGETL+QREA TM +V Q K A+A + + ++AYEPVWAIGTGK AT QA EV E+RK + TS ++A I YGGS Sbjct: 2 RKKVIAGNWKMNKVLSEAGEFMNSVVPKAPKGNDVEAIVCAPFPFLSKLVEQAKGSEVKVAAQNMHFEDSGAFTGEVSPVMLKDLGVTHVVLGHSERRELFAETNELVNKKTKAAFAHDLTPIVCVGETLDQREANETMNIVGEQVKQAVAGLTNEQVAETIIAYEPVWAIGTGKTATSEQANEVCTEIRKVVAEVTSADVAEKVIIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_THICR (Triosephosphate isomerase OS=Thiomicrospira crunogena (strain XCL-2) GN=tpiA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.289e-33 Identity = 88/214 (41.12%), Postives = 120/214 (56.07%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKK-GGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ FV GNWK +G +K +V+ LN + +L K+ L G + QN ++ GA+TGE SA ML ++ VILGHSERR I E ++ + KV AL GL I CVGETLE+RE+G V++ Q A+ V ++++V+AYEPVWAIGTGK A+ QAQ+VH +R LA +P +A I YGGS Sbjct: 2 RQLFVAGNWKMHGDKASIKTLVTGLN-AKADSVGDVLVAVCPPAIYLDYTKNCLMAGEIALGGQNMAIEPVQGAYTGETSASMLKDVGCQYVILGHSERRAIYGETDQDIAAKVKTALDSGLTPILCVGETLEERESGQLESVISQQLDAVISEVGIDQFADVVIAYEPVWAIGTGKTASAQQAQDVHAFIR-GQLAKLNPSVAEKVIIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACCN (Triosephosphate isomerase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=tpiA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.289e-33 Identity = 91/213 (42.72%), Postives = 114/213 (53.52%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N T E V + +GQ FL LV ++ V AQN +K GAFTGEIS L +L++ V+LGHSERR + E +E V K A GL I C GETLE+RE+G T ++VA Q TKA+A V+AYEP+WAIGTGK ++ A EV +RK + SP A A RI YGGS Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATQGTDLKVGAQNMHFEKNGAFTGEISPVALSDLKVSYVVLGHSERREMFAETDETVNKKTLAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSAEDANEVCAHIRKVVAEAVSPAAAEAVRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PSEMY (Triosephosphate isomerase OS=Pseudomonas mendocina (strain ymp) GN=tpiA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.296e-33 Identity = 88/213 (41.31%), Postives = 117/213 (54.93%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVK-KGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK +GT V +++ L Q +V+ V AQ+C + + GA TGE++ LV+ V++GHSERRLIL E +E V K A GL + CVGET EQREA +T+ VV Q A+ D V + +N V+AYEPVWAIGTG ATP QAQEVH +R +A ++A+ RI+YGGS Sbjct: 2 RRPLVAGNWKMHGTRASVAELIEGLRR-QELPVEVDVAVFPSSLHVTQVVEGLAGKAVKVGAQDCAAQVEQGALTGELAVSQLVDGGCELVLVGHSERRLILGESDEVVVSKFAAVQKAGLTPVLCVGETREQREANATLGVVGGQLAAVIDALGVQALNNAVVAYEPVWAIGTGLTATPEQAQEVHAAIRA-QVAQLDAQVASELRILYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_NITEC (Triosephosphate isomerase OS=Nitrosomonas eutropha (strain C91) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.327e-33 Identity = 92/216 (42.59%), Postives = 122/216 (56.48%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVA--AQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M R FV GNWK G + +++++ + G +L +S L+ G HVA QN GA+TGE+SA ML + VI+GHSERR + E N+ V +K A Q L I CVGETL QREA T +V+A Q A+ V++ V+AYEPVWAIGTG+ ATP QAQ+VH +R + A+ S EIAA +I+YGGS Sbjct: 1 MTRAGFVAGNWKMYGNLVQNQELLAAIVLG-IPSLQNASCAVCVPYPYLAQAQSVLK-GTHVAWGGQNISQHHQGAYTGEVSAGMLTDFGCRYVIVGHSERRTLYGEDNQMVAEKFHSAQEQSLVPILCVGETLAQREANETEQVIARQLDAVIGLVGVNAIKQSVIAYEPVWAIGTGETATPQQAQDVHAFVRNRIAAHNS-EIAADIQIVYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_VESOH (Triosephosphate isomerase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.570e-33 Identity = 81/213 (38.03%), Postives = 120/213 (56.34%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ + GNWK N + E +V + G ++ V++ + ++ AQ+ + K GAFTGE+S +M+ + VI+GHSERR + E NE V KV AL+ L + C+GE LE R++G T EVV+ Q +A+ D V ++ +I++AYEPVWAIGTG ATP QAQ+ H +R +LA ++ T I+YGGS Sbjct: 2 RQVIIAGNWKMNASKEATNILVMDILSGMVDVKSKVIICVPFP--YMAQVEALVGCSQLNLGAQDLNINKSGAFTGEVSVDMIKDFGARYVIVGHSERRSLYFENNEIVAQKVQVALNNNLTPLLCIGELLEDRDSGKTQEVVSEQIQAVIDLVGIDAFKDIIVAYEPVWAIGTGITATPQQAQDTHAFIRS-MLAKYDDNVSQITSILYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPH (Triosephosphate isomerase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.570e-33 Identity = 85/212 (40.09%), Postives = 118/212 (55.66%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI-ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK NG ++V ++VS + E ++ V+ LR G V AQN + K GA+TGE+SA ML + + V++GHSERR +E FV K + G+ + CVGETL +RE G T +V+A Q A+ A + + V+AYEPVWAIGTGK ATP QAQ++H +R L+ + A +IYGGS Sbjct: 2 RQKIVAGNWKMNGQIQQVTELVSQIEE-LIGFDCAAQVAVMPPSIYIPKVRDCLRTGKIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPVLCVGETLSERENGKTEQVIAQQVLAVSAKGKDCFRDCVVAYEPVWAIGTGKTATPEQAQKIHQFIRD-LVGEINDSDAKHLTLIYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPC (Triosephosphate isomerase OS=Legionella pneumophila (strain Corby) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.570e-33 Identity = 85/212 (40.09%), Postives = 118/212 (55.66%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI-ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK NG ++V ++VS + E ++ V+ LR G V AQN + K GA+TGE+SA ML + + V++GHSERR +E FV K + G+ I CVGETL +RE G T +++A Q A+ A + + V+AYEPVWAIGTGK ATP QAQ++H +R L+ + A +IYGGS Sbjct: 2 RQKIVAGNWKMNGQIQQVTELVSQIEE-LIGFDCAAQVAVMPPSIYIPKVRDCLRTGRIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPILCVGETLSERENGKTEQIIAQQVLAVSAKGKDCFRDCVVAYEPVWAIGTGKTATPEQAQKIHQFIRD-LVGEINDSDAKHLTLIYGGS 211 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |