FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CHLTE (Triosephosphate isomerase OS=Chlorobium tepidum GN=tpiA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.570e-33 Identity = 87/205 (42.44%), Postives = 107/205 (52.20%), Query Frame = 1 Query: 61 GNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GNWK N T E + + + E L V + G + AQNC + G FTGE+S ML VILGHSERR + E N V KV AL++GL VI CVGETL++RE G T ++V AQ V+ S +V+AYEPVWAIGTGK AT QAQEVH +R + + A RI YGGS Sbjct: 3 GNWKMNNTIAESVDLATAIAEKVGADGVQCEVGIAPTFPALYEVCKVIEWSGIRLCAQNCHYESDGPFTGEVSTRMLAAAGCSYVILGHSERRQLFGETNATVNLKVKKALAEGLSVILCVGETLDERERGVTGQIVTAQVVEGLIDVTDISKLVIAYEPVWAIGTGKTATKEQAQEVHALIRAKVTELYGQKAADHLRIQYGGS 207
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PELPB (Triosephosphate isomerase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32 Identity = 84/214 (39.25%), Postives = 114/214 (53.27%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK N + E +++ L EG ++ S + AQNC + GAFTGE+SA M++ + VI+GHSERR E N V ++ ALS+GL VI CVGETL +RE+G V+++Q + D + S IV+AYEPVWAIGTGK A+ AQA+EVH +R + + RI YGGS Sbjct: 2 RRKIVVGNWKMNNSVAESVQLATDVLAALGEGFSGCEVGIAPTYLALDATEKVIAES---EVQLVAQNCHYENDGAFTGEVSARMILAVGCSSVIIGHSERRQYFGETNATVNLRIKKALSEGLNVILCVGETLAERESGVMETVISSQVREGLDGIIDISAIVIAYEPVWAIGTGKTASSAQAEEVHLFIRTLVTGLYGQTASEKVRIQYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_HAHCH (Triosephosphate isomerase OS=Hahella chejuensis (strain KCTC 2396) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32 Identity = 84/211 (39.81%), Postives = 116/211 (54.98%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF-HVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK NG+ E K ++ + + +L V+S++ + +QNC + GA+TGE+SA+M +++ VILGHSERR + E +E + KV A+ GL I CVGETL RE+G EV Q A+ V + V+AYEPVWAIGTGK A+P AQ +H LR + P+IA RI+YGGS Sbjct: 2 RKKLIAGNWKSNGSLERNKALLEGIVNAKALGSVDVVVCPPFP--YLQSVESAVSDSMIELGSQNCSATEDGAYTGEVSAKMCADMKCSWVILGHSERRALYAENDEVIACKVKRAVESGLAPILCVGETLADRESGRAEEVTLKQLDAVFMSVQPDDSWVVAYEPVWAIGTGKTASPEDAQSMHKALRN-NIRKHFPQIADKIRILYGGS 209
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PSEHT (Triosephosphate isomerase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 83/212 (39.15%), Postives = 117/212 (55.19%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK V GNWK NG+ E VK++ +N + LV + + G Q GAFTGE+ A+++ L V++GHSERR I E N+ V K A A GL I CVGE+ ++E G T ++VAAQ A+ ++ V++ + V+AYEPVWAIGTGK A+P QAQ VH +R +A+ + ++A I+YGGS Sbjct: 4 RKAMVAGNWKMNGSLELVKQMSDAINNVKSNEIDIVLFPPFP------LVSAMIASGVSTGTQTVSENTPGAFTGEVDAQLIKELGAQYVLVGHSERRSIYKESNDVVAAKFARAQQVGLTPILCVGESESEQENGKTEQIVAAQIDAVIEKLGVAALKDSVIAYEPVWAIGTGKTASPEQAQSVHKFIRD-KIASLNSDLAQGLTILYGGS 208
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MARAV (Triosephosphate isomerase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 85/214 (39.72%), Postives = 112/214 (52.34%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK NG+ + VK++V + E +L V AQN + GA+TGEISAEM ++ V++GHSERR + E + KV L GL + CVGETL +REA VVA Q ++ +AD WS +V+AYEPVWAIGTGK AT AQ +H E+RK L +P A ++YGGS Sbjct: 2 RRRIVAGNWKMNGSKDLVKQLVGAVREQSGSVGEDVEVVIIPPAIYLDQVAEQGGGRITTGAQNVSQWQSGAYTGEISAEMARDMGCGYVLVGHSERRQLFGETDSVAAAKVEQVLLSGLVAVLCVGETLAEREADQAEAVVAEQVRSGLSVVAD--GQWSRVVVAYEPVWAIGTGKTATADDAQAMHSEIRKVLDGMNAP--ANEISVLYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPL (Triosephosphate isomerase OS=Legionella pneumophila (strain Lens) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 85/212 (40.09%), Postives = 118/212 (55.66%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI-ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK NG ++V ++VS + E ++ V+ LR G V AQN + K GA+TGE+SA ML + + V++GHSERR +E FV K + G+ + CVGETL +RE G T +V+A Q A+ A + + V+AYEPVWAIGTGK ATP QAQ++H +R L+ + A +IYGGS Sbjct: 2 RQKIVAGNWKMNGQIQQVTELVSQI-EKLIGFDCAAQVAVMPPSIYIPKVRDCLRTGKIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPVLCVGETLSERENGKTEQVIAQQVLAVSAKGKDCFRDCVVAYEPVWAIGTGKTATPEQAQKIHQFIRD-LVGEINDSDAKHLTLIYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_COXBU (Triosephosphate isomerase OS=Coxiella burnetii GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 85/215 (39.53%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIA---DRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M R+ V GNWK +G+ E V +++ L G ++ +R AQ+ + GA+TGE+SA ML + VI+GHSERR E NE V KV AL G++ I CVGET +QR A T+ V+ Q + D ++S +V+AYEP+WAIGTGK ATP+QA+EVH LR L +A +TR++YGGS Sbjct: 1 MQRRPLVAGNWKMHGSRESVGQLLRALKHGCERLETAELAVFPPFVFLQQCEEALMRTQISWGAQDVSEFERGAYTGEVSAAMLRDFHCRYVIVGHSERRQRHGETNEQVAAKVRAALRCGIRPIICVGETEKQRNANQTLSVIKEQLAVVLQMNDNLASLEGMVVAYEPIWAIGTGKNATPSQAEEVHAALRD-QLHRQDATLAESTRLLYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_COXBR (Triosephosphate isomerase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 85/215 (39.53%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIA---DRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M R+ V GNWK +G+ E V +++ L G ++ +R AQ+ + GA+TGE+SA ML + VI+GHSERR E NE V KV AL G++ I CVGET +QR A T+ V+ Q + D ++S +V+AYEP+WAIGTGK ATP+QA+EVH LR L +A +TR++YGGS Sbjct: 1 MQRRPLVAGNWKMHGSRESVGQLLRALKHGCERLETAELAVFPPFVFLQQCEEALMRTQISWGAQDVSEFERGAYTGEVSAAMLRDFHCRYVIVGHSERRQRHGETNEQVAAKVRAALRCGIRPIICVGETEKQRNANQTLSVIKEQLAVVLQMNDNLASLEGMVVAYEPIWAIGTGKNATPSQAEEVHAALRD-QLHRQDATLAESTRLLYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_COXBN (Triosephosphate isomerase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 85/215 (39.53%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIA---DRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M R+ V GNWK +G+ E V +++ L G ++ +R AQ+ + GA+TGE+SA ML + VI+GHSERR E NE V KV AL G++ I CVGET +QR A T+ V+ Q + D ++S +V+AYEP+WAIGTGK ATP+QA+EVH LR L +A +TR++YGGS Sbjct: 1 MQRRPLVAGNWKMHGSRESVGQLLRALKHGCERLETAELAVFPPFVFLQQCEEALMRTQISWGAQDVSEFERGAYTGEVSAAMLRDFHCRYVIVGHSERRQRHGETNEQVAAKVRAALRCGIRPIICVGETEKQRNANQTLSVIKEQLAVVLQMNDNLASLEGMVVAYEPIWAIGTGKNATPSQAEEVHAALRD-QLHRQDATLAESTRLLYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CHLTR (Triosephosphate isomerase OS=Chlamydia trachomatis GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 81/222 (36.49%), Postives = 116/222 (52.25%), Query Frame = 1 Query: 10 HNTHTHSSKMGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 H H+ SK FV GNWK N T E + + L + ++ + AQ GAFTGEISA ML ++ + V++GHSERR I +E N + +K A A+ G+ + C+GETLE++E+G+T +++ Q ++ ++ +LAYEPVWAIGTGKVA P QE H RK + + S +IA T I+YGGS Sbjct: 17 HLLHSEPSKQ----FVFGNWKMNKTLTEAQTFLKSFISSDILSNPQIITGIIPPFTLLSACQQAVSDSPIFLGAQTTHEADSGAFTGEISAPMLKDIGVDFVLIGHSERRHIFHEQNPVLAEKAAAAIHSGMIPVLCIGETLEEQESGATQDILLNQLTTGLSKLPEQASFILAYEPVWAIGTGKVAHPDLVQETHAFCRKTIASLFSKDIAERTPILYGGS 234 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |