FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_ORYLA (Triosephosphate isomerase OS=Oryzias latipes GN=tpi1 PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 5.766e-54 Identity = 109/210 (51.90%), Postives = 136/210 (64.76%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+FFVGGNWK NG E +++++S LN +L +S L VAAQNC+ GAFTGEIS M+ + VILGHSERR + E +E +G KVA+AL L VIAC+GE LE+REAG+T +V+ AQT+ IA+ V W +VLAYEPVWAIGTGK ATP QAQEVH +LR W AN S E++ + RIIYGGS Sbjct: 4 RRFFVGGNWKMNGNKESLEELMSTLNTASLHEDTEVVCAAPSI--YLDFARSGLDSRISVAAQNCYKVAKGAFTGEISPAMIKDCGADWVILGHSERRHVFGENDELIGQKVAHALESDLSVIACIGEKLEEREAGTTEDVIFAQTQVIAENVMDWEKVVLAYEPVWAIGTGKTATPEQAQEVHEKLRAWFRANISEEVSDSLRIIYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPISA_DANRE (Triosephosphate isomerase A OS=Danio rerio GN=tpi1a PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 9.835e-54 Identity = 111/210 (52.86%), Postives = 134/210 (63.81%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RKFFVGGNWK NG E + +++ LN +L +S L VAAQNC+ GAFTGEIS M+ + I VILGHSERR + E +E +G KVA+ L L VIAC+GE LE+REAG+T +VV QTK IAD V W+ +VLAYEPVWAIGTGK A+P QAQEVH +LR WL AN S +A + RIIYGGS Sbjct: 4 RKFFVGGNWKMNGDKESLGELIMTLNTASLNDETDVVCGAPSI--YLDYARSKLDQRIGVAAQNCYKVPKGAFTGEISPAMIKDCGIDWVILGHSERRHVFGESDELIGQKVAHCLESDLGVIACIGEKLEEREAGTTEDVVFEQTKVIADNVKDWTRVVLAYEPVWAIGTGKTASPEQAQEVHEKLRGWLRANVSDAVADSVRIIYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PIG (Triosephosphate isomerase OS=Sus scrofa GN=TPI1 PE=2 SV=4) HSP 1 Score: 209.534 bits (532), Expect = 1.284e-53 Identity = 107/210 (50.95%), Postives = 136/210 (64.76%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RKFFVGGNWK NG + ++++ LN + ++ + L P VAAQNC+ GAFTGEI M+ +L V+LGHSERR + E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV QTK IAD V W+ +VLAYEPVWAIGTGK ATP QAQEVH +LR WL + +A +TRIIYGGS Sbjct: 5 RKFFVGGNWKMNGRKNNLGELINTLNAAKLPADTEVVCAPPTA--YIDFARQKLDPKIAVAAQNCYKVANGAFTGEIGPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWNKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVPEAVAHSTRIIYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LATCH (Triosephosphate isomerase OS=Latimeria chalumnae PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.375e-53 Identity = 106/210 (50.48%), Postives = 137/210 (65.24%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RKFFVGGNWK NG + + +++ LN + +L + + P F VAAQNC+ GAFTGEIS M+ + + VILGHSERR + E +E +G KV++ALS+GL V+AC+GE L++REAG T VV T+ IAD V WS +VLAYEPVWAIGTGK A+P Q+QE+H +LRKWL N S +A + RIIYGGS Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIQTLNAAKVPFTGEIVCAPPEA--YLDFARLKVDPKFGVAAQNCYKVSKGAFTGEISPAMIKDCGVTWVILGHSERRHVFGESDELIGQKVSHALSEGLGVVACIGEKLDEREAGITEGVVFEVTEVIADDVKDWSKVVLAYEPVWAIGTGKTASPQQSQELHGKLRKWLKENVSETVADSVRIIYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_SCHPO (Triosephosphate isomerase OS=Schizosaccharomyces pombe GN=tpi1 PE=1 SV=4) HSP 1 Score: 205.297 bits (521), Expect = 2.422e-52 Identity = 106/212 (50.00%), Postives = 133/212 (62.74%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RKFFVGGN+K NG+ E +K I+ LN + +L + ++ V AQN + KK GA+TGE SA+ L++ I + GHSERR I E +EFV DK +AL QGL V+AC+GETL +REA T+ VV Q AIAD+V +WS IV+AYEPVWAIGTGK ATP QAQEVH E+RKW +A R+IYGGS Sbjct: 1 MARKFFVGGNFKMNGSLESMKTIIEGLNTTKLNVGDVETVIFPQNM-YLITTRQQVKKDIGVGAQNVFDKKNGAYTGENSAQSLIDAGITYTLTGHSERRTIFKESDEFVADKTKFALEQGLTVVACIGETLAEREANETINVVVRQLNAIADKVQNWSKIVIAYEPVWAIGTGKTATPEQAQEVHAEIRKWATNKLGASVAEGLRVIYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_SCHJA (Triosephosphate isomerase OS=Schistosoma japonicum GN=TPI PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.164e-52 Identity = 109/213 (51.17%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS---WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RKFFVGGNWK NG+ + K ++ L+E +L V+ SL HVAAQNC+ GAFTGEIS M+ ++ VILGHSERR I NE +E V +KV +AL++GL V+AC+GETL +RE+G T EV Q AIA+++ S W +V+AYEPVWAIGTGKVA+P QAQEVH LRKW NT + RIIYGGS Sbjct: 5 RKFFVGGNWKMNGSRADNKVLIHSLSEAHFCGDTEILIAAPFV--YLNEVRQSLAKEIHVAAQNCYKVPKGAFTGEISPSMIKDVGCDWVILGHSERRSIFNESDELVAEKVQHALAEGLSVVACIGETLSERESGKTEEVCVRQLNAIANKIKSIDEWKRVVVAYEPVWAIGTGKVASPGQAQEVHNFLRKWFKTNTPSGVDQQIRIIYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_SCHMA (Triosephosphate isomerase OS=Schistosoma mansoni GN=TPI PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.396e-52 Identity = 108/213 (50.70%), Postives = 137/213 (64.32%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS---WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RKFFVGGNWK NG+ ++ K++ +L+E FL ++ SL+ HVAAQNC+ GAFTGEIS M+ ++ VILGHSERR I E +E + +KV +AL++GL VIAC+GETL +RE+ T EV Q KAIA+++ S W +V+AYEPVWAIGTGKVATP QAQEVH LRKW N + RIIYGGS Sbjct: 5 RKFFVGGNWKMNGSRDDNDKLLKLLSEAHFDDNTEVLIAPPSV--FLHEIRKSLKKEIHVAAQNCYKVSKGAFTGEISPAMIRDIGCDWVILGHSERRNIFGESDELIAEKVQHALAEGLSVIACIGETLSERESNKTEEVCVRQLKAIANKIKSADEWKRVVVAYEPVWAIGTGKVATPQQAQEVHNFLRKWFKTNAPNGVDEKIRIIYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_AEDTO (Triosephosphate isomerase (Fragment) OS=Aedes togoi GN=Tpi PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 9.205e-52 Identity = 103/165 (62.42%), Postives = 122/165 (73.94%), Query Frame = 1 Query: 178 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +L L +S L VAAQNC+ GAFTGEIS ML +L I VILGHSERR I E +E + DKVA+AL++GLKVIAC+GETL++REAG T V QTKAIAD+V WSN+V+AYEPVWAIGTGK ATP QAQEVH LRKW N S +++A+ RI YGGS Sbjct: 28 YLTLARSQLPDSVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGETLQEREAGQTEAVCFRQTKAIADKVKDWSNVVVAYEPVWAIGTGKTATPEQAQEVHVALRKWFTDNVSADVSASIRIQYGGS 192
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_NEUCR (Triosephosphate isomerase OS=Neurospora crassa GN=tpi-1 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.498e-51 Identity = 107/213 (50.23%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RKFFVGGN+K NGT +++K IV LN Q +L VK +L +P VAAQN + K GAFTGEISA L++L + VILGHSERR L E +EF+ K YAL G+ VI C GE+ + R+AG T++ V Q A+A ++ W N+V+AYEP+WAIGTG VAT QAQEVH +R WL N S ++A TRI+YGGS Sbjct: 1 MARKFFVGGNFKMNGTRKDLKAIVDNLNNAQLDPNAEVVIAPPAL--YLDFVKQNLQKPNVEVAAQNVFNKPNGAFTGEISATQLLDLGVKWVILGHSERRNELGESDEFIASKTKYALDNGISVIWCCGESKDTRQAGETIKFVENQLAALAKEINDWKNVVIAYEPIWAIGTGLVATKEQAQEVHAAIRSWLKQNVSDKVAEETRILYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CULPI (Triosephosphate isomerase (Fragment) OS=Culex pipiens GN=Tpi PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.736e-50 Identity = 100/165 (60.61%), Postives = 119/165 (72.12%), Query Frame = 1 Query: 178 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +L L +S L VAAQNC+ GAFTGEIS ML +L I VILGHSERR I E E + DK+ +AL++GLKVIAC+GETL++REA T V QTKAIAD+V WSN+V+AYEPVWAIGTGK ATP QAQEVH LRKW N S ++++A RI YGGS Sbjct: 28 YLSLARSQLPDTVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESGELIADKIVHALAEGLKVIACIGETLQEREAAKTEAVCFRQTKAIADKVKDWSNVVIAYEPVWAIGTGKTATPEQAQEVHAALRKWFTENVSADVSSAIRIQYGGS 192 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |