FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BRAJA (Triosephosphate isomerase OS=Bradyrhizobium japonicum GN=tpiA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.439e-28 Identity = 72/206 (34.95%), Postives = 103/206 (50.00%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + GNWK NG + ++LN + V AQ+C K GA TG+I+AEML N +I+GHSERR E + V K A G+ I C+GET QR+AG T++++ Q S+ +N+V+AYEPVWAIGTG T +++H +R++L + S + A RI+YGGS Sbjct: 9 IAGNWKMNGLKASAAEFDAMLNGAADVATKADLLVCPPATLIAAFADKARGKKVAVGAQDCHPKASGAHTGDIAAEMLANAGATAIIVGHSERRADHGEGDALVRQKAEAAWRAGVTAIVCIGETQAQRDAGQTLDILRGQLDGSLPDGSTAANLVVAYEPVWAIGTGLTPTVQDVEQIHGFIREFLTSRFSVD-GAKMRILYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BORAP (Triosephosphate isomerase OS=Borrelia afzelii (strain PKo) GN=tpiA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.439e-28 Identity = 81/214 (37.85%), Postives = 110/214 (51.40%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK F+ GNWK + T+ E + + L V ++ + AQN + GA T EIS ML+ + VILGHSE RL L E +E + K+ L K +I CVGETL++R++G T++VV +Q K D VS I+LAYEPVWAIGTGK AT +A+EVH +R ++ S + I YGGS Sbjct: 2 RKTFLAGNWKMHYTSAEASIVAKQIATEVKTLNDDFVIMITPPFTALSKVSECIKGSNILLGAQNMSYMESGARTSEISPSMLLEFGVEYVILGHSECRLYLAETDEIINKKIRAGLKHSFKYLILCVGETLDERDSGKTLDVVLSQVKKGLDCVSESDIKRIILAYEPVWAIGTGKTATKEEAEEVHKAIRLEIMKLYSKSASDNIIIQYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_NOCFA (Triosephosphate isomerase OS=Nocardia farcinica GN=tpiA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28 Identity = 85/218 (38.99%), Postives = 111/218 (50.92%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N E V+KI L E + + + AQ+ V + GA+TGEISA ML L V++GHSERR +E + V K AL GL I C+GE L REAG+ +E Q + +S+ + +V+AYEPVWAIGTGKVA+ A AQEV +R L PE+AA R++YGGS Sbjct: 1 MARKPLIAGNWKMNLNHLEAIALVQKIAFALPEKYFEKVDVAVIPPFVDIRSVQTLVEGDKLLLTYGAQDVSVHESGAYTGEISASMLAKLGCTFVVVGHSERRQYHHEDDATVLGKAKKALEHGLTPIVCIGEGLNVREAGTHVEYNLEQLRGSLKGLSAEQIAKVVIAYEPVWAIGTGKVASAADAQEVCGAIRAELAELAGPEVAAQVRVLYGGS 218
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_DESVV (Triosephosphate isomerase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tpiA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28 Identity = 72/157 (45.86%), Postives = 102/157 (64.97%), Query Frame = 1 Query: 211 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GF + Q+ + GA+TGEI+ ML++ V+ GHSERR IL E +E V K A++L GL+V+ C+GE L++REAG +V+A Q + +AD +++ ++V+AYEPVWAIGTGKVA PA+ E H +R L A + AA RI+YGGS Sbjct: 60 GFAIGGQDVYPATEGAYTGEIAPGMLLDAGCGWVLTGHSERRHILGEDDETVARKTAFSLKAGLRVVLCIGEKLDEREAGRLEDVLAHQLQVGLADVDATYVPQSLVVAYEPVWAIGTGKVAGPAEVVEAHALVRSLLEARYGRD-GAAIRILYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_DESVH (Triosephosphate isomerase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tpiA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28 Identity = 72/157 (45.86%), Postives = 102/157 (64.97%), Query Frame = 1 Query: 211 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GF + Q+ + GA+TGEI+ ML++ V+ GHSERR IL E +E V K A++L GL+V+ C+GE L++REAG +V+A Q + +AD +++ ++V+AYEPVWAIGTGKVA PA+ E H +R L A + AA RI+YGGS Sbjct: 60 GFAIGGQDVYPATEGAYTGEIAPGMLLDAGCGWVLTGHSERRHILGEDDETVARKTAFSLKAGLRVVLCIGEKLDEREAGRLEDVLAHQLQVGLADVDATYVPQSLVVAYEPVWAIGTGKVAGPAEVVEAHALVRSLLEARYGRD-GAAIRILYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CLONN (Triosephosphate isomerase OS=Clostridium novyi (strain NT) GN=tpiA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28 Identity = 82/212 (38.68%), Postives = 106/212 (50.00%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N T + K+V L +VK++ V AQN ++ GAFTGE + ML L + VILGHSERR E + + K+ A L I C+GETLE+REA T EV+A Q K + + + V+AYEP+WAIGTGK AT QA+E +RK + E A RI YGGS Sbjct: 2 RKAIIAGNWKMNNTISQGLKLVEELKP-LVADANCDVVVCPPTLALDAVVKATEGTNIKVGAQNMHFEESGAFTGETAPAMLEELGVKYVILGHSERRQYFGENDADLNKKMKKAFEHNLTPILCIGETLEEREADVTEEVLAKQIKLDLAGLTEAQIAETVIAYEPIWAIGTGKTATSDQAEETIAFVRKTVAGMFGAEAAEKMRIQYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BAUCH (Triosephosphate isomerase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=tpiA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28 Identity = 80/208 (38.46%), Postives = 107/208 (51.44%), Query Frame = 1 Query: 61 GNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVA--AQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GNWK NG+ V + L +L KS L G H+A AQN + GAFTGEISA+ML ++ +I+GH ERRL E NE + +K A ++GL + C+GET E+ E T + Q I + V ++ N V+AYEP+WAI TGK A P Q Q++H +R +L N IA I YGGS Sbjct: 8 GNWKLNGSKHMVSNFIISLRNQLSNMINCCNVAIAPPMIYLDRAKSYLT-GSHIALGAQNVDLHVSGAFTGEISAKMLKDIGAKYIIIGHIERRLYHKESNEDIANKFACLKNEGLIPVLCIGETKEENEKDQTKAICVRQLDYILNIVGTQAFKNAVIAYEPIWAIATGKSANPLQIQKIHKFIRSYLF-NHDQAIAEQVIIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_DEHE1 (Triosephosphate isomerase OS=Dehalococcoides ethenogenes (strain 195) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28 Identity = 82/214 (38.32%), Postives = 113/214 (52.80%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWL---LANTSPEIAAATRIIYGGS 672 R+ + GNWK N T E +V + + L VK+ L H+ AQN + ++ GA+TGEIS ML ++ P VI+GHSERR E + V K+ AL G+ I CVGE LE+ E G T +++ Q K ++ S+I++AYEP+WAIGTGK AT A+A +RK L NT+ I T I+YGGS Sbjct: 2 RQIIIAGNWKMNTTLSEACTLVQGMKY-ELDQISGIQKIVCPPFISLAPVKTILDGSSIHLGAQNLFYEEKGAYTGEISPLMLQDI-CPYVIIGHSERRAYFGETGQVVNRKIKAALQAGIMPIVCVGEKLEENENGQTRQILETQMKEALAGINP-SSIIIAYEPIWAIGTGKAATAAEANNTISYIRKVLGDIWGNTASRI---TPILYGGS 209
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS3_RHIEC (Triosephosphate isomerase (Fragment) OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28 Identity = 70/142 (49.30%), Postives = 93/142 (65.49%), Query Frame = 1 Query: 253 GAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GA+TGE+SAE+L + +I V++GHSERR E + K AL+ GLKVI CVGE+LEQRE+G VV Q +A V++ W +IV+AYEP+WAIGTGK A+P AQ +H ++R+ L TS A I+YGGS Sbjct: 68 GAYTGEVSAELLKDSQIEYVLIGHSERREYFAESAAILNAKAQNALNAGLKVIYCVGESLEQRESGQAEVVVLQQICDLASVVTAEQWPHIVIAYEPIWAIGTGKTASPEDAQTMHAKIREGLTQITSH--GANMAILYGGS 207
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CLOK5 (Triosephosphate isomerase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.434e-28 Identity = 81/212 (38.21%), Postives = 106/212 (50.00%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N E+ ++V L +VKS V AQN ++ GA+TGEIS ML +L++ VI+GHSERR NE +E + K+ A + I C GE+L +RE G T EV+ Q K A+ D R IV+AYEP+WAIGTGK AT QA + +R + A RI YGGS Sbjct: 2 RKAIIAGNWKMNKNLEDALELVEELKP-LVRGAKCDVVLCPPYVCLDAVVKSVGGTNIKVGAQNMHYEESGAYTGEISPGMLKSLKVDYVIIGHSERRQYFNEKDETINKKIKKAFEHDIIPIVCCGESLLERENGITEEVLGRQIKLALKDLRKEQVEKIVIAYEPIWAIGTGKTATDKQANDTIAHIRGVVSKMYGENAAEVVRIQYGGS 212 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |