FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_SILST (Triosephosphate isomerase OS=Silicibacter sp. (strain TM1040) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28 Identity = 88/217 (40.55%), Postives = 120/217 (55.30%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR---IIYGGS 672 M RK GNWK NGT E + ++ + L +G + +++ R G + Q+C K GA TG++SA+ML + VI+GHSERR E + V K A + GL + C+GETLE+REAG+T+EVV AQ ++ D V++ N V+AYEPVWAIGTGKV T Q EVH LR L+A AA + ++YGGS Sbjct: 1 MARKL-AAGNWKMNGTGEHLAELEN-LAQGDLPEGVDVLICPPATL----ISRAADRAGDIAIGGQDCHAKTSGAHTGDLSADMLRDAGATYVIIGHSERRADHGEGDADVRAKTEAAQAAGLVAVVCIGETLEEREAGTTLEVVGAQLAGSLPDGVTA-ENTVVAYEPVWAIGTGKVPTLDQIAEVHDALRADLVA----RFGAAGKDLPLLYGGS 206
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCGA (Triosephosphate isomerase OS=Mycoplasma gallisepticum GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28 Identity = 78/211 (36.97%), Postives = 110/211 (52.13%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 K ++ GNWK TT+EVK+ SVLN+ + LGL R V AQ+ A TG +S E L ++ + VI+GHSERR + +E +E + KV L ++ I C+GETLE+ EA T V+ Q + + S ++++AYEPVWAIGTGK A+ AQ+ +R L +S IA I+YGGS Sbjct: 5 KRYIFGNWKTYKTTQEVKEFFSVLNQTKLTKNPDVVFGVAPVFVHLGLANQLERNECLVLAQDANYVMNKANTGTVSYEQLKDIGVNYVIIGHSERRKLFHESDELINQKVKTLLENKMRPILCIGETLEEYEANKTKAVLKDQLEKDLKGIDSSLLKDLIIAYEPVWAIGTGKTASSQTAQDAIAYIRTVLGLLSSKTIANELPILYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_FRATN (Triosephosphate isomerase OS=Francisella tularensis subsp. novicida (strain U112) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28 Identity = 74/206 (35.92%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 61 GNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GNWK NG + +K++ S +++ Q ++ V S L V QN GA+TGEISA ML ++ +++GHSERR + E +E V K+ + + + C+GE+L+ R++G +V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R LLA +A +I+YGGS Sbjct: 7 GNWKMNGNSTSIKELCSGISQAQYDTSRVAIAVFPSSV-YVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLDQIQETHQFIRS-LLAKVDERLAKNIKIVYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CHRSD (Triosephosphate isomerase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28 Identity = 79/209 (37.80%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQT-KAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + GNWK NG++ V + +L + +L G + AQ GA TGE+S ML ++ V++GHSERR + E ++ V D++ AL+ L+ I CVGETLE R+AG T +VV Q A+A + + + +AYEPVWAIGTG+ ATP QAQEV +R++ A P +A + R+IYGGS Sbjct: 6 IAGNWKMNGSSALVDAFGQAFADADLPESVEVVVHPPFP--YLDAARRALAGGPVKLGAQTLNPLHAGARTGEVSGRMLKEFDVEYVLVGHSERRELYRESDDDVYDRLLAALNADLRPILCVGETLEARDAGRTRDVVLRQVGHALAPLEPAQRARVTIAYEPVWAIGTGRTATPEQAQEVMAAIREY-QAGFDPALAQSMRLIYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BDEBA (Triosephosphate isomerase OS=Bdellovibrio bacteriovorus GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28 Identity = 69/152 (45.39%), Postives = 91/152 (59.87%), Query Frame = 1 Query: 226 AQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH---FELRKWLLANTSPEIAAATRIIYGGS 672 AQNC+ + GAFTGE SA+++ +L V++GHSERR I E + V DKVA+ GL + C+GETL++RE+ T V+ Q + +V+AYEPVWAIGTGKVATP Q E H F + K L T+P I+YGGS Sbjct: 61 AQNCYFQAQGAFTGENSAQVVKDLGGSYVLIGHSERRAIFGEGDALVADKVAFVQGLGLTPMLCIGETLQERESAKTFRVLETQLNLGLAKADKTKPVVVAYEPVWAIGTGKVATPEQVAETHTDVFNILKALGFETAP-------ILYGGS 205
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACLD (Triosephosphate isomerase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28 Identity = 80/212 (37.74%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQT-KAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N E V + L + V AQN ++ GAFTGEIS L +L + ++GHSERR + E +E V K A G+ I CVGETLE+REA T E+VA Q KA+A + + V+AYEP+WAIGTGK +T A EV +RK + + A + RI YGGS Sbjct: 2 RKPIIAGNWKMNKVLSEAVSFVEEVKSSIPAADKAEAVVCAPALFLEKLTSAVKGTDLKVGAQNMHFEESGAFTGEISPAALKDLGVEYCVIGHSERREMFAETDETVNKKAHAAFKYGIVPIICVGETLEEREANKTNELVADQVKKALAGLTTEQVAASVIAYEPIWAIGTGKSSTAQDANEVCAHIRKTVASEFGQTAADSVRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LACSS (Triosephosphate isomerase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=tpiA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 77/215 (35.81%), Postives = 112/215 (52.09%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAI----ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N + + V+ + L++++ VAA+NC+ ++ GAFTGE S + L + + VI+GHSERR +E +E + K + I C GE+LE REAG E V+ Q T+ + AD+VSS +V+AYEP+WAIGTGK A+ QAQE+ +R+ + +A RI YGGS Sbjct: 2 RKPIIAGNWKMNMNPTQTTEFVNAIKANLPKFDQTESVIGAPAVDLPALLEAAKGTDLKVAAENCYFEEAGAFTGETSPKTLNEMGVDYVIIGHSERRDYFHETDEDINKKAHAIFKNNMTPIFCCGESLETREAGKAEEWVSNQVTEGLKGLSADQVSS---MVIAYEPIWAIGTGKTASADQAQEICAVVRQTVAKLYDQTVADKVRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LACLM (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=tpiA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 79/217 (36.41%), Postives = 106/217 (48.85%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N T E + V + + +AA+N + + GAFTGE S +V+L I +I+GHSERR +E +E + K + G I C GETLE EAG T E V+ Q +A A++V SN+V+AYEP+WAIGTGK AT A E +R + E++ A RI YGGS Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGIEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLTAEQV---SNLVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LACLA (Triosephosphate isomerase OS=Lactococcus lactis subsp. lactis GN=tpiA PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 77/214 (35.98%), Postives = 105/214 (49.07%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N T E + V + + +AA+N + + GAFTGE S +V+L + +I+GHSERR +E +E + K + G I C GETLE EAG T E V+ Q +A +S+ SN+V+AYEP+WAIGTGK AT A E +R + E++ A RI YGGS Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGVEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLSAEQVSNLVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_FRATT (Triosephosphate isomerase OS=Francisella tularensis subsp. tularensis GN=tpiA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 74/206 (35.92%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 61 GNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GNWK NG + +K++ S +++ Q ++ V S L V QN GA+TGEISA ML ++ +++GHSERR + E +E V K+ + + + C+GE+L+ R++G +V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R LLA +A +I+YGGS Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSV-YVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGS 210 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |