FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_FRAT1 (Triosephosphate isomerase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tpiA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 74/206 (35.92%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 61 GNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GNWK NG + +K++ S +++ Q ++ V S L V QN GA+TGEISA ML ++ +++GHSERR + E +E V K+ + + + C+GE+L+ R++G +V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R LLA +A +I+YGGS Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSV-YVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CLOPH (Triosephosphate isomerase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=tpiA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 77/212 (36.32%), Postives = 109/212 (51.42%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ + GNWK N T E K++ L ++++ + A+N + ++ GA+TGEI+ ML ++ + VI+GHSERR E + V KV AL G+ I C GE+L QRE G T++ + Q K V++ + V+AYEP+WAIGTGKVAT QAQEV +R + A A RI YGGS Sbjct: 2 RRKIIAGNWKMNKTPSETVKLIEELKP-LVKNDDVDVVFCVPAISLTTAIEAAKGSNISIGAENMFYEESGAYTGEIAPNMLTDIGVKYVIIGHSERREYFAESDITVNKKVLKALEHGITPIICCGESLTQREQGITIDWIRQQIKIAFLNVTAEQAATTVIAYEPIWAIGTGKVATTEQAQEVCAAIRVCIGELYGETTAEAIRIQYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CHLAB (Triosephosphate isomerase OS=Chlamydophila abortus GN=tpiA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 80/216 (37.04%), Postives = 112/216 (51.85%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFH----VAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK ++ GNWK + T +E K +SV L S++ FH + AQN GAFTGEIS ML ++ V+LGHSE R I +E + + KV A +G+ + C+GETLE RE G+T +++ Q ++ +++++AYEPVWAIGTGKVA+ QE H R+ L S E A I+YGGS Sbjct: 1 MERKRYIFGNWKMHKTAKEAKDYLSVFCPLLEEVAPVSCVGITPAFTALHACCESIK-FFHSPLWLGAQNVHQDTSGAFTGEISLPMLKEFDVNFVLLGHSECRHIFHEEDTTIALKVGAAAREGIIPVLCIGETLEVREKGATEAMLSNQLMLGLAQLPETASVIIAYEPVWAIGTGKVASAVDVQEAHAFCREVLANIFSKEKAEEISILYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPU (Triosephosphate isomerase OS=Mycoplasma pulmonis GN=tpiA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 81/216 (37.50%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSV------LNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +K + GNWK N T +E + ++ LN + L + + ++ AQN + GAFTGEISA+ML ++ VI+GHSERR E N+ V K A+ GL I CVGE+LE+ EAG T V+ Q K + + S IV+AYEP+WAIGTGKVAT AQ++ K++ + TS ++ I YGGS Sbjct: 2 KKLLIIGNWKMNKTYDEARDFINAFSNAYALNGAKISENIEYGIAPSFTNMSLFNKELLEKTNINLVAQNINENRSGAFTGEISAQMLKSINAKYVIVGHSERRQNYRETNKIVNQKAKAAIENGLIPIICVGESLEEYEAGKTKAVIKKQIKQSLEAL-DLSKIVVAYEPIWAIGTGKVATAEVAQQI----CKFIRSITSKDLI----IQYGGS 208
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LACLS (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=tpiA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 78/217 (35.94%), Postives = 106/217 (48.85%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N T E + V + + +AA+N + + GAFTGE S +V+L + +I+GHSERR +E +E + K + G I C GETLE EAG T E V+ Q +A A++V SN+V+AYEP+WAIGTGK AT A E +R + E++ A RI YGGS Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGVEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLTAEQV---SNLVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_FRATO (Triosephosphate isomerase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=tpiA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 74/206 (35.92%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 61 GNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GNWK NG + +K++ S +++ Q ++ V S L V QN GA+TGEISA ML ++ +++GHSERR + E +E V K+ + + + C+GE+L+ R++G +V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R LLA +A +I+YGGS Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSV-YVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRKSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_FRATH (Triosephosphate isomerase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=tpiA PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 74/206 (35.92%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 61 GNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GNWK NG + +K++ S +++ Q ++ V S L V QN GA+TGEISA ML ++ +++GHSERR + E +E V K+ + + + C+GE+L+ R++G +V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R LLA +A +I+YGGS Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSV-YVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRKSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_FRATF (Triosephosphate isomerase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=tpiA PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 74/206 (35.92%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 61 GNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GNWK NG + +K++ S +++ Q ++ V S L V QN GA+TGEISA ML ++ +++GHSERR + E +E V K+ + + + C+GE+L+ R++G +V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R LLA +A +I+YGGS Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSV-YVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRKSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CLOB1 (Triosephosphate isomerase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tpiA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 82/214 (38.32%), Postives = 105/214 (49.07%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R + GNWK N T +E ++V L L VK S V AQN ++ GA+TGEI+ +ML L + VI+GHSERR NE +E V KV A L I C GE+LE+RE T +V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + A +A RI YGGS Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKPLVKDAKCDVVVCPTYVCLPAVLEEVKGS---NIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKAMYGESVADKIRIQYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACME (Triosephosphate isomerase OS=Bacillus megaterium GN=tpiA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 83/213 (38.97%), Postives = 106/213 (49.77%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQT-KAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N E V + +G FL LV+++ + AQN ++ GAFTGE+S L +L + VILGHSERR + E +E V K A GL I C GET E+ E T VVA Q KA+A V+AYEP+WAIGTGK +T A EV +R + S ++A A RI YGGS Sbjct: 2 RKPIIAGNWKMNKVLSEATSFVEEV-KGAVPSPESVDSVVCAPALFLDRLVEATKGTDLKIGAQNMHFEENGAFTGEVSPVALADLGVNYVILGHSERREMFAETDETVNQKTIAAFKHGLTPIVCCGETNEEYEQDQTKTVVANQVQKALAGLTDEQVKQTVIAYEPIWAIGTGKSSTAEGANEVCAYIRSVVAEQFSQDVADAVRIQYGGS 213 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |