FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_ACIB3 (Triosephosphate isomerase OS=Acinetobacter baumannii (strain AB307-0294) GN=tpiA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 82/217 (37.79%), Postives = 116/217 (53.46%), Query Frame = 1 Query: 52 FVGGNWK-------CNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +V GNWK N EE K+++ ++ + R + VA V GA+TGE+SAE+L + +I V++GHSERR I + E + K+ AL+ G+ VI CVGE+LEQRE G +VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L TS + I+YGGS Sbjct: 9 WVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQAQLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLTS--AGSNIAILYGGS 223
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BORGA (Triosephosphate isomerase OS=Borrelia garinii GN=tpiA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.065e-27 Identity = 79/214 (36.92%), Postives = 108/214 (50.47%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK F+ GNWK + T+ E + + L V ++ + AQN + GA T EIS ML+ + VILGHSE RL L E +E + K+ L K +I CVGETL +R++ T++VV Q K D VS I+LAYEP+WAIGTGK AT +A+EVH +R ++ S ++ I YGGS Sbjct: 2 RKTFLAGNWKMHYTSTEASIVAKKIATEVKTLKDDFVIMITPPFTALSKVSECIKGSNILLGAQNMSYMESGARTSEISPSMLLEFGVEYVILGHSECRLYLGETDEIINKKILTGLKHPFKYLILCVGETLNERDSEKTLDVVLNQVKKGLDGVSESDIKRIILAYEPIWAIGTGKTATKEEAEEVHKAIRLEIMKLYSKSVSDNVIIQYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_RUBXD (Triosephosphate isomerase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=tpiA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27 Identity = 75/213 (35.21%), Postives = 109/213 (51.17%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLV-KSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ + NWK N T E + ++ L L V + + G AQN + + GA+TGE+SA ML+++ I+GHSERR + E +E V K A+ GL + CVGET E+R+AG E V+ Q +A+ + + +S +V AYEP+WAIGTGK A+P AQ+ +R L A R++YGGS Sbjct: 5 RRPLMAANWKMNKTVREAQDYMAALLPRVADLAGEVDVAVFAPFTCLSEVARMAEGSGVLAGAQNFFYEDSGAYTGEVSAPMLLDVGARASIVGHSERRELFCETDESVARKARRAVEAGLLPVVCVGETEEERDAGRMWEKVSGQVRAVVEGLGDASGGRVVFAYEPIWAIGTGKTASPEDAQDAIGRIRGLLRELRGEGFAEEARLLYGGS 217
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PEDPA (Triosephosphate isomerase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tpiA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27 Identity = 76/208 (36.54%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + GNWK N +E ++ + + LV S AA+N + + GAFTGE S + L + + V++GHSERR E +E + K + + I C GETLEQREAG T E VA Q T A+ D + + V+AYEP+WAIGTGK A+ QAQEV +R+ + +A RI YGGS Sbjct: 6 IAGNWKMNKNPQETQEFLDAIKGKLPDASVVESVIAAPAIDLSTLVAFSKDEQLKTAAENSYFEDEGAFTGETSPKALNEMGVNYVVIGHSERRQYFGETDEDINKKAKAIFNNNMTPIICCGETLEQREAGETNEWVAGQITNALKDLTAEQVAASVIAYEPIWAIGTGKTASSDQAQEVCHVIRETVAKLYDQTVADKVRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BORRA (Triosephosphate isomerase OS=Borrelia recurrentis (strain A1) GN=tpiA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27 Identity = 86/216 (39.81%), Postives = 110/216 (50.93%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVK-SSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK F+ GNWK + T+ E + + +G F L K + G +V AQN + GA T EI+ ML+ + VILGHSE R L E +E + KV L K +I CVGETLE+RE G T++VV Q + V S I+LAYEPVWAIGTGK AT +AQEVH +R + + S A I YGGS Sbjct: 2 RKVFLAGNWKMHYTSVEAADVAKQIVDG--VYNINNNVVVMVTPTFTSLCKVCRVTKGTNVLLGAQNMSYENSGARTSEIAPSMLLEFGVDYVILGHSECRTYLGENDEIINKKVLTGLKHPFKYLILCVGETLEEREKGKTLDVVLNQVRNGLASVYESDLQRIILAYEPVWAIGTGKTATKEEAQEVHKAIRLEIQSLYSKSAADNIIIQYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BORDL (Triosephosphate isomerase OS=Borrelia duttonii (strain Ly) GN=tpiA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27 Identity = 86/216 (39.81%), Postives = 110/216 (50.93%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVK-SSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK F+ GNWK + T+ E + + +G F L K + G +V AQN + GA T EI+ ML+ + VILGHSE R L E +E + KV L K +I CVGETLE+RE G T++VV Q + V S I+LAYEPVWAIGTGK AT +AQEVH +R + + S A I YGGS Sbjct: 2 RKVFLAGNWKMHYTSVEAADVAKQIVDG--VYNINNNVVVMVTPTFTSLCKVCRVTKGTNVLLGAQNMSYENSGARTSEIAPSMLLEFGVDYVILGHSECRTYLGENDEIINKKVLTGLKHPFKYLILCVGETLEEREKGKTLDVVLNQVRNGLASVYESDLQRIILAYEPVWAIGTGKTATKEEAQEVHKAIRLEIQSLYSKSAADNIIIQYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_RHOFD (Triosephosphate isomerase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27 Identity = 86/212 (40.57%), Postives = 110/212 (51.89%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK NG+ + +V L G +L ++ L + AQ+ + GAFTGEIS ML + I+GHSERR E + V K AL+ G+ I CVGETL +REAG T EVV Q A+ S +V+AYEPVWAIGTGK A+ QAQ+VH LR+ L A + A +IIYGGS Sbjct: 2 RKKLIAGNWKMNGSLAANEALVKGLRVG--VGASVCQVALCVPSVYLAQCQALLVGTAIALGAQDLSQHEVGAFTGEISGAMLQEFGVRYCIVGHSERRQYHFETDALVAAKAQRALACGITPIVCVGETLAEREAGRTEEVVKRQLAAVIHANGHCISEVVVAYEPVWAIGTGKTASIEQAQQVHSVLRQQLQAASIQ--ADRIQIIYGGS 209
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CUPTR (Triosephosphate isomerase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27 Identity = 84/214 (39.25%), Postives = 111/214 (51.87%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVA--AQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK +G+ ++ + G +L ++ L G VA AQ+ + GAFTGE++A ML V++GHSERR E ++ V K AL G+ + CVGETL QREAG T VV Q +A+ + V +VLAYEPVWAIGTGK AT QAQ VH LR + A + +A I+YGGS Sbjct: 2 RQKLVIGNWKMHGSLAANAALLEGIQAGAGVARATLAVCAPFP--YLAQCQALLN-GSKVAWGAQDVSAEARGAFTGEVAASMLGEFGCTYVLVGHSERRTYHGETDQAVAAKALRALEFGIVPVVCVGETLAQREAGETEAVVGRQLQAVLEALTVEQLGRVVLAYEPVWAIGTGKTATSEQAQAVHAFLRGQVAARDA-GVAGRMAILYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BORBZ (Triosephosphate isomerase OS=Borrelia burgdorferi (strain ZS7) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27 Identity = 81/214 (37.85%), Postives = 108/214 (50.47%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK F+ GNWK + T+ E + + L V ++ + AQN + GA T EIS ML+ + VILGHSE RL L E +E + K+ L K +I CVGETL++R++G T+EVV Q K + VS I+LAYEPVWAIGTGK AT +A+EVH +R + S + I YGGS Sbjct: 2 RKTFLAGNWKMHYTSAEASIVAKKIATEVKTLKDDVVIMITPPFTALSKVSECIKGSNILLGAQNMSYMESGARTSEISPSMLLEFGVEYVILGHSECRLYLAETDEIINKKILAGLKHPFKYLILCVGETLDERDSGKTLEVVLNQVKKGLNCVSESDIQRIILAYEPVWAIGTGKTATKEEAEEVHKAIRLEITKLYSKSASDNIIIQYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BORBU (Triosephosphate isomerase OS=Borrelia burgdorferi GN=tpiA PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27 Identity = 81/214 (37.85%), Postives = 108/214 (50.47%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK F+ GNWK + T+ E + + L V ++ + AQN + GA T EIS ML+ + VILGHSE RL L E +E + K+ L K +I CVGETL++R++G T+EVV Q K + VS I+LAYEPVWAIGTGK AT +A+EVH +R + S + I YGGS Sbjct: 2 RKTFLAGNWKMHYTSAEASIVAKKIATEVKTLKDDVVIMITPPFTALSKVSECIKGSNILLGAQNMSYMESGARTSEISPSMLLEFGVEYVILGHSECRLYLAETDEIINKKILAGLKHPFKYLILCVGETLDERDSGKTLEVVLNQVKKGLNCVSESDIQRIILAYEPVWAIGTGKTATKEEAEEVHKAIRLEITKLYSKSASDNIIIQYGGS 215 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |