FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PHYAS (Triosephosphate isomerase OS=Phytoplasma australiense GN=tpiA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.600e-27 Identity = 72/208 (34.62%), Postives = 110/208 (52.88%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + GNWK E + + +N L ++ + P + AQN + + GAFTGEIS LV+L + V+LGHSERR++ E ++ V K+ AL L + C+GETLE +E T E + Q T+A+ D I++AYEPVWAIGTGK A+P +A + ++R+ + S ++ + +I+YGGS Sbjct: 10 IAGNWKMYKDKNEALEFIQKVNFS-IPNSKEVETIIFAQSTLLDVLVQNQGPNLKIGAQNAFHESEGAFTGEISPLNLVSLGVKYVLLGHSERRVLFGETDQLVNLKLLKALQNNLSPVLCLGETLETKENNKTKEFLEKQLTQALKDVPQEDLEKILIAYEPVWAIGTGKTASPQEANQTIKQIREKVTNLYSAQVVQSLKILYGGS 216
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_FRATM (Triosephosphate isomerase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.600e-27 Identity = 73/205 (35.61%), Postives = 112/205 (54.63%), Query Frame = 1 Query: 64 NWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 NWK NG + +K++ S +++ Q ++ V S L V QN GA+TGEISA ML ++ +++GHSERR + E +E V K+ + + + C+GE+L+ R++G +V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R LLA ++A +I+YGGS Sbjct: 8 NWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSV-YVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDEKLAKNIKIVYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.600e-27 Identity = 72/207 (34.78%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLV-KSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + GNWK NG + ++L G K+ V AQ+C K GA TG++SAEML + +I+GHSERR E + V K GL I CVGET +QR+AG T++++ Q + S+ +N+ +AYEPVWAIGTG T +++H +R L+ + E A RI+YGGS Sbjct: 9 IAGNWKMNGLKASTAEFEAMLAGAAEVTGKADLLVCPPATLLAGFADKARGTRAVAVGAQDCHAKASGAHTGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLLIERFNGE-GARMRILYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_ACIAD (Triosephosphate isomerase OS=Acinetobacter sp. (strain ADP1) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.600e-27 Identity = 67/143 (46.85%), Postives = 97/143 (67.83%), Query Frame = 1 Query: 253 GAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GA+TGEISAE+L + +I V++GHSERR +L + E + K+++AL+ G+ VI CVGE+LEQRE G ++V Q IA VS+ W + IV+AYEP+WAIGTG+ A+P AQ +H ++R+ L T + ++YGGS Sbjct: 83 GAYTGEISAELLTDSQIRYVLIGHSERRDLLGDHVEILKAKLSHALNAGMTVIYCVGESLEQREQGLAEQIVLQQICDIAPVVSAEQWQHQIVIAYEPIWAIGTGRTASPEDAQAIHAKIREGLCQIT--PAGSQIALLYGGS 223
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_THEYD (Triosephosphate isomerase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 74/212 (34.91%), Postives = 111/212 (52.36%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFL---GLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 K F+ NWK + T V++ ++ L+E F+ + K + + AQN + + GA+TGE+S ML + + VI+GHSERR E ++ + K+ + +GLKVI C+GET E R+ TME++ Q + ++S + +AYEPVWAIGTG VAT Q ++ H +R L E A RI+YGGS Sbjct: 3 KKFIVANWKMHKT---VREALAFLDEFIPITKGLNGREIGIAPTFICIESVGKVLINTSIKLCAQNAFYENKGAYTGEVSPAMLKDCGVEYVIIGHSERRKYFYENDDIINKKIHACIKEGLKVIFCIGETFEDRQNNKTMEILKTQIRNGLLEINSPEALTIAYEPVWAIGTGVVATEEQIKQSHLFIRN-QLKEIYGERANEVRILYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_STRMU (Triosephosphate isomerase OS=Streptococcus mutans GN=tpiA PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 76/214 (35.51%), Postives = 104/214 (48.60%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N T E ++ + + G+ K VAAQNC+ + GAFTGE S L L + VI+GHSERR +E ++ + K + I C GE+LE EAG T E + Q A +S+ S++V+AYEP+WAIGTGK A A ++ +R + E+A A RI YGGS Sbjct: 1 MSRKPIIAGNWKMNKTAAEAREFIDAVKNNIPSNNLVDTVIGSPALFLEGMKKGVKGTELQVAAQNCYWEDFGAFTGETSPAALAALGVDYVIIGHSERRDYFHETDQEINKKAHAIFKHKMTPILCCGESLETYEAGKTAEWIEGQITADLKGLSAEQVSSMVIAYEPIWAIGTGKSADANIADDICGVVRATVEKLYGKEVAQAVRIQYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_NITOC (Triosephosphate isomerase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 78/209 (37.32%), Postives = 112/209 (53.59%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 V GNWK NG+ + ++ + + + +L ++S L+ + AQN + GA+TGEI+ ML +L VI+GHSERR + E + V +K A + I CVGETL++RE T +VV Q A+ + V++ V+AYEP+WAIGTG+ ATP QAQEVH +R + S IA I+YGGS Sbjct: 6 VVGNWKMNGSRAANRALLESMRK-EMEAGVTAEVAVCPPFVYLADMESLLQGSVINWGAQNLSHHEVGAYTGEIAPSMLADLGCRFVIVGHSERRTLYGETDSLVAEKAIVAQKVNIIPIICVGETLQEREQNITEQVVKRQLNAVLELAGVNALEKAVIAYEPIWAIGTGRTATPEQAQEVHALIRSHVAIQNS-GIAEELLILYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCTU (Triosephosphate isomerase OS=Mycobacterium tuberculosis GN=tpiA PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 81/221 (36.65%), Postives = 111/221 (50.23%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG++S L L V++GHSERR NE + V K A AL GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAIGTG+VA+ A AQEV +RK L + SP IA R++YGGS Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGS 218
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCTA (Triosephosphate isomerase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 81/221 (36.65%), Postives = 111/221 (50.23%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG++S L L V++GHSERR NE + V K A AL GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAIGTG+VA+ A AQEV +RK L + SP IA R++YGGS Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGS 218
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCBO (Triosephosphate isomerase OS=Mycobacterium bovis GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 81/221 (36.65%), Postives = 111/221 (50.23%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG++S L L V++GHSERR NE + V K A AL GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAIGTG+VA+ A AQEV +RK L + SP IA R++YGGS Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGS 218 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |